EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000019806 (Gene tree)
Gene ID: 103731474
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 32956 bases
Position: chrKL198770.1:22601-55556
Accession: 103731474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000020273	SRP54	PF00448.22	9.3e-54	1	2
ENSNGAP00000020273	SRP54	PF00448.22	9.3e-54	2	2
ENSNGAP00000020273	SRP54_N	PF02881.19	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000025942	-	1362	XM_017797252	ENSNGAP00000020273	453 (aa)	XP_017652741	-

Gene Model

Click here to download ENSNGAG00000019806's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019806	-	100	89.881	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSNGAG00000019806	-	100	86.706	ENSAPOG00000011314	srp54	100	86.706	Acanthochromis_polyacanthus
ENSNGAG00000019806	-	100	89.881	ENSAMEG00000015544	SRP54	100	89.881	Ailuropoda_melanoleuca
ENSNGAG00000019806	-	88	84.410	ENSACIG00000022831	srp54	97	84.410	Amphilophus_citrinellus
ENSNGAG00000019806	-	100	86.706	ENSAOCG00000019401	srp54	100	86.706	Amphiprion_ocellaris
ENSNGAG00000019806	-	100	86.706	ENSAPEG00000001977	srp54	100	86.706	Amphiprion_percula
ENSNGAG00000019806	-	100	86.905	ENSATEG00000013877	srp54	100	86.905	Anabas_testudineus
ENSNGAG00000019806	-	93	87.975	ENSAPLG00000010125	SRP54	95	87.975	Anas_platyrhynchos
ENSNGAG00000019806	-	85	83.871	ENSACAG00000010631	-	100	83.871	Anolis_carolinensis
ENSNGAG00000019806	-	100	88.492	ENSACAG00000002103	-	100	88.492	Anolis_carolinensis
ENSNGAG00000019806	-	64	82.993	ENSACAG00000001124	-	91	82.993	Anolis_carolinensis
ENSNGAG00000019806	-	100	89.881	ENSANAG00000022133	SRP54	100	89.881	Aotus_nancymaae
ENSNGAG00000019806	-	100	86.706	ENSACLG00000015866	srp54	100	86.706	Astatotilapia_calliptera
ENSNGAG00000019806	-	100	86.310	ENSAMXG00000032669	SRP54	100	86.310	Astyanax_mexicanus
ENSNGAG00000019806	-	100	89.881	ENSBTAG00000019085	SRP54	100	89.881	Bos_taurus
ENSNGAG00000019806	-	98	63.454	WBGene00009012	F21D5.7	100	63.454	Caenorhabditis_elegans
ENSNGAG00000019806	-	100	89.881	ENSCJAG00000006581	SRP54	100	89.881	Callithrix_jacchus
ENSNGAG00000019806	-	100	89.881	ENSCAFG00000013331	SRP54	100	89.881	Canis_familiaris
ENSNGAG00000019806	-	100	89.881	ENSCAFG00020023427	SRP54	100	89.881	Canis_lupus_dingo
ENSNGAG00000019806	-	100	89.881	ENSCHIG00000026345	SRP54	100	89.881	Capra_hircus
ENSNGAG00000019806	-	94	78.316	ENSTSYG00000035333	-	93	78.316	Carlito_syrichta
ENSNGAG00000019806	-	100	89.683	ENSTSYG00000002680	-	100	89.683	Carlito_syrichta
ENSNGAG00000019806	-	87	73.664	ENSCAPG00000008780	SRP54	80	73.664	Cavia_aperea
ENSNGAG00000019806	-	100	89.484	ENSCPOG00000003691	SRP54	100	89.484	Cavia_porcellus
ENSNGAG00000019806	-	89	87.619	ENSCCAG00000024179	SRP54	100	87.828	Cebus_capucinus
ENSNGAG00000019806	-	100	89.881	ENSCATG00000034083	SRP54	100	89.881	Cercocebus_atys
ENSNGAG00000019806	-	100	89.881	ENSCLAG00000015076	SRP54	100	89.881	Chinchilla_lanigera
ENSNGAG00000019806	-	100	89.881	ENSCSAG00000015575	SRP54	100	89.881	Chlorocebus_sabaeus
ENSNGAG00000019806	-	95	85.655	ENSCHOG00000008986	SRP54	100	85.655	Choloepus_hoffmanni
ENSNGAG00000019806	-	100	89.087	ENSCPBG00000026195	SRP54	100	89.087	Chrysemys_picta_bellii
ENSNGAG00000019806	-	100	72.817	ENSCING00000007380	-	100	72.817	Ciona_intestinalis
ENSNGAG00000019806	-	100	89.881	ENSCANG00000028532	SRP54	100	89.881	Colobus_angolensis_palliatus
ENSNGAG00000019806	-	100	89.881	ENSCGRG00001009525	-	100	89.881	Cricetulus_griseus_chok1gshd
ENSNGAG00000019806	-	74	86.753	ENSCGRG00000009453	-	89	86.753	Cricetulus_griseus_crigri
ENSNGAG00000019806	-	100	85.913	ENSCSEG00000012392	srp54	100	85.913	Cynoglossus_semilaevis
ENSNGAG00000019806	-	100	86.706	ENSCVAG00000010395	srp54	100	86.706	Cyprinodon_variegatus
ENSNGAG00000019806	-	100	86.706	ENSDARG00000098367	srp54	100	86.706	Danio_rerio
ENSNGAG00000019806	-	100	89.881	ENSDNOG00000032525	SRP54	100	89.881	Dasypus_novemcinctus
ENSNGAG00000019806	-	87	73.884	ENSDORG00000005159	-	97	73.884	Dipodomys_ordii
ENSNGAG00000019806	-	96	69.691	FBgn0010747	Srp54k	98	69.478	Drosophila_melanogaster
ENSNGAG00000019806	-	81	52.897	ENSETEG00000012102	-	99	52.897	Echinops_telfairi
ENSNGAG00000019806	-	100	88.889	ENSETEG00000016307	-	100	88.889	Echinops_telfairi
ENSNGAG00000019806	-	100	79.167	ENSEBUG00000009437	-	100	79.167	Eptatretus_burgeri
ENSNGAG00000019806	-	100	89.881	ENSEASG00005002057	SRP54	100	89.881	Equus_asinus_asinus
ENSNGAG00000019806	-	99	89.558	ENSECAG00000018042	SRP54	98	89.558	Equus_caballus
ENSNGAG00000019806	-	89	100.000	ENSEEUG00000001511	SRP54	80	100.000	Erinaceus_europaeus
ENSNGAG00000019806	-	100	86.310	ENSELUG00000003395	srp54	100	86.310	Esox_lucius
ENSNGAG00000019806	-	100	89.881	ENSFCAG00000032033	SRP54	100	89.881	Felis_catus
ENSNGAG00000019806	-	100	88.690	ENSFALG00000005995	SRP54	100	88.690	Ficedula_albicollis
ENSNGAG00000019806	-	100	89.881	ENSFDAG00000016767	SRP54	100	89.881	Fukomys_damarensis
ENSNGAG00000019806	-	100	86.310	ENSFHEG00000004263	srp54	100	86.310	Fundulus_heteroclitus
ENSNGAG00000019806	-	94	85.356	ENSGMOG00000011391	srp54	100	85.356	Gadus_morhua
ENSNGAG00000019806	-	100	88.690	ENSGALG00000023135	SRP54	100	88.690	Gallus_gallus
ENSNGAG00000019806	-	100	86.905	ENSGAFG00000011586	srp54	100	86.905	Gambusia_affinis
ENSNGAG00000019806	-	100	86.111	ENSGACG00000004181	srp54	100	86.111	Gasterosteus_aculeatus
ENSNGAG00000019806	-	100	89.087	ENSGAGG00000014766	SRP54	100	89.087	Gopherus_agassizii
ENSNGAG00000019806	-	100	89.881	ENSGGOG00000002926	SRP54	100	89.881	Gorilla_gorilla
ENSNGAG00000019806	-	100	86.706	ENSHBUG00000005678	srp54	100	86.706	Haplochromis_burtoni
ENSNGAG00000019806	-	100	89.881	ENSHGLG00000002850	SRP54	100	89.881	Heterocephalus_glaber_female
ENSNGAG00000019806	-	100	89.881	ENSHGLG00100005263	SRP54	100	89.881	Heterocephalus_glaber_male
ENSNGAG00000019806	-	100	66.527	ENSHGLG00100007281	-	100	66.527	Heterocephalus_glaber_male
ENSNGAG00000019806	-	100	85.119	ENSHCOG00000021127	srp54	100	85.119	Hippocampus_comes
ENSNGAG00000019806	-	100	85.913	ENSIPUG00000001420	srp54	100	85.913	Ictalurus_punctatus
ENSNGAG00000019806	-	100	89.881	ENSSTOG00000016023	SRP54	100	89.881	Ictidomys_tridecemlineatus
ENSNGAG00000019806	-	86	65.682	ENSJJAG00000016404	-	100	65.682	Jaculus_jaculus
ENSNGAG00000019806	-	100	84.921	ENSJJAG00000013417	-	100	84.921	Jaculus_jaculus
ENSNGAG00000019806	-	100	86.310	ENSKMAG00000007707	srp54	100	86.310	Kryptolebias_marmoratus
ENSNGAG00000019806	-	100	86.706	ENSLBEG00000021122	srp54	100	86.706	Labrus_bergylta
ENSNGAG00000019806	-	100	86.706	ENSLBEG00000018690	srp54	100	86.706	Labrus_bergylta
ENSNGAG00000019806	-	100	86.706	ENSLACG00000017890	SRP54	100	86.706	Latimeria_chalumnae
ENSNGAG00000019806	-	100	87.103	ENSLOCG00000009440	srp54	100	87.103	Lepisosteus_oculatus
ENSNGAG00000019806	-	100	89.881	ENSLAFG00000012007	SRP54	100	89.881	Loxodonta_africana
ENSNGAG00000019806	-	100	89.881	ENSMFAG00000044371	SRP54	100	89.881	Macaca_fascicularis
ENSNGAG00000019806	-	100	89.881	ENSMMUG00000015073	FAM177A1	100	89.881	Macaca_mulatta
ENSNGAG00000019806	-	100	89.881	ENSMNEG00000006947	SRP54	100	89.881	Macaca_nemestrina
ENSNGAG00000019806	-	100	89.881	ENSMLEG00000042251	SRP54	100	89.881	Mandrillus_leucophaeus
ENSNGAG00000019806	-	100	86.706	ENSMAMG00000004803	srp54	100	86.706	Mastacembelus_armatus
ENSNGAG00000019806	-	100	86.706	ENSMZEG00005027528	srp54	100	86.706	Maylandia_zebra
ENSNGAG00000019806	-	100	83.992	ENSMGAG00000012481	SRP54	100	83.992	Meleagris_gallopavo
ENSNGAG00000019806	-	100	89.881	ENSMAUG00000014447	-	100	89.881	Mesocricetus_auratus
ENSNGAG00000019806	-	100	89.881	ENSMICG00000010270	SRP54	100	89.881	Microcebus_murinus
ENSNGAG00000019806	-	86	88.409	ENSMOCG00000000948	-	100	88.409	Microtus_ochrogaster
ENSNGAG00000019806	-	87	83.893	ENSMMOG00000020303	srp54	98	83.893	Mola_mola
ENSNGAG00000019806	-	100	89.683	ENSMODG00000012925	-	100	89.683	Monodelphis_domestica
ENSNGAG00000019806	-	100	89.683	ENSMODG00000023150	-	100	89.683	Monodelphis_domestica
ENSNGAG00000019806	-	87	84.876	ENSMALG00000009163	srp54	98	84.876	Monopterus_albus
ENSNGAG00000019806	-	100	89.881	MGP_CAROLIEiJ_G0017754	-	100	89.881	Mus_caroli
ENSNGAG00000019806	-	100	89.087	ENSMUSG00000079108	Srp54c	100	89.087	Mus_musculus
ENSNGAG00000019806	-	100	89.881	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSNGAG00000019806	-	100	89.881	ENSMUSG00000112449	Srp54b	100	89.881	Mus_musculus
ENSNGAG00000019806	-	100	89.881	MGP_PahariEiJ_G0029510	-	100	89.881	Mus_pahari
ENSNGAG00000019806	-	100	89.881	ENSMPUG00000016302	SRP54	100	89.881	Mustela_putorius_furo
ENSNGAG00000019806	-	100	89.286	ENSMLUG00000008958	SRP54	100	89.286	Myotis_lucifugus
ENSNGAG00000019806	-	86	85.000	ENSNBRG00000006000	srp54	100	85.000	Neolamprologus_brichardi
ENSNGAG00000019806	-	100	89.881	ENSNLEG00000003496	SRP54	100	89.881	Nomascus_leucogenys
ENSNGAG00000019806	-	63	100.000	ENSMEUG00000000138	-	65	100.000	Notamacropus_eugenii
ENSNGAG00000019806	-	60	100.000	ENSOPRG00000014502	-	56	100.000	Ochotona_princeps
ENSNGAG00000019806	-	100	89.881	ENSODEG00000004865	SRP54	100	89.881	Octodon_degus
ENSNGAG00000019806	-	100	86.706	ENSONIG00000011768	srp54	100	86.706	Oreochromis_niloticus
ENSNGAG00000019806	-	100	89.881	ENSOANG00000014051	SRP54	100	89.881	Ornithorhynchus_anatinus
ENSNGAG00000019806	-	100	89.286	ENSOCUG00000007838	SRP54	100	89.286	Oryctolagus_cuniculus
ENSNGAG00000019806	-	100	86.508	ENSORLG00000010027	srp54	100	86.508	Oryzias_latipes
ENSNGAG00000019806	-	100	86.508	ENSORLG00020001878	srp54	100	86.508	Oryzias_latipes_hni
ENSNGAG00000019806	-	100	86.508	ENSORLG00015021866	srp54	100	86.508	Oryzias_latipes_hsok
ENSNGAG00000019806	-	100	86.508	ENSOMEG00000020952	srp54	100	86.508	Oryzias_melastigma
ENSNGAG00000019806	-	100	89.881	ENSOGAG00000012188	SRP54	100	89.881	Otolemur_garnettii
ENSNGAG00000019806	-	100	89.881	ENSOARG00000007160	SRP54	100	89.881	Ovis_aries
ENSNGAG00000019806	-	100	89.881	ENSPPAG00000017434	SRP54	100	89.881	Pan_paniscus
ENSNGAG00000019806	-	100	90.381	ENSPPRG00000014047	SRP54	100	90.381	Panthera_pardus
ENSNGAG00000019806	-	100	89.881	ENSPTIG00000000744	SRP54	96	89.881	Panthera_tigris_altaica
ENSNGAG00000019806	-	100	89.881	ENSPTRG00000006259	FAM177A1	100	89.881	Pan_troglodytes
ENSNGAG00000019806	-	100	89.881	ENSPANG00000023853	SRP54	100	89.881	Papio_anubis
ENSNGAG00000019806	-	100	86.508	ENSPKIG00000001953	srp54	100	86.508	Paramormyrops_kingsleyae
ENSNGAG00000019806	-	100	88.889	ENSPSIG00000006476	SRP54	100	88.889	Pelodiscus_sinensis
ENSNGAG00000019806	-	90	83.043	ENSPMGG00000004127	srp54	99	83.043	Periophthalmus_magnuspinnatus
ENSNGAG00000019806	-	100	77.183	ENSPEMG00000019634	-	100	77.183	Peromyscus_maniculatus_bairdii
ENSNGAG00000019806	-	100	80.556	ENSPMAG00000006078	-	100	80.556	Petromyzon_marinus
ENSNGAG00000019806	-	100	89.683	ENSPCIG00000016175	SRP54	100	89.683	Phascolarctos_cinereus
ENSNGAG00000019806	-	100	86.905	ENSPFOG00000008870	srp54	100	86.905	Poecilia_formosa
ENSNGAG00000019806	-	100	86.905	ENSPLAG00000009889	srp54	100	86.905	Poecilia_latipinna
ENSNGAG00000019806	-	100	86.905	ENSPMEG00000008601	srp54	100	86.905	Poecilia_mexicana
ENSNGAG00000019806	-	100	86.905	ENSPREG00000004505	srp54	100	86.905	Poecilia_reticulata
ENSNGAG00000019806	-	100	84.722	ENSPPYG00000005739	SRP54	100	84.722	Pongo_abelii
ENSNGAG00000019806	-	100	89.683	ENSPCAG00000006268	SRP54	100	89.683	Procavia_capensis
ENSNGAG00000019806	-	100	87.921	ENSPCOG00000022473	SRP54	100	87.921	Propithecus_coquereli
ENSNGAG00000019806	-	59	100.000	ENSPVAG00000010056	SRP54	69	100.000	Pteropus_vampyrus
ENSNGAG00000019806	-	100	86.706	ENSPNYG00000009717	srp54	100	86.706	Pundamilia_nyererei
ENSNGAG00000019806	-	100	86.310	ENSPNAG00000008544	srp54	100	86.310	Pygocentrus_nattereri
ENSNGAG00000019806	-	100	89.683	ENSRNOG00000032776	Srp54a	100	89.683	Rattus_norvegicus
ENSNGAG00000019806	-	100	89.881	ENSRROG00000041292	SRP54	100	89.881	Rhinopithecus_roxellana
ENSNGAG00000019806	-	84	45.805	YPR088C	SRP54	95	42.146	Saccharomyces_cerevisiae
ENSNGAG00000019806	-	93	89.241	ENSSBOG00000035145	SRP54	100	89.241	Saimiri_boliviensis_boliviensis
ENSNGAG00000019806	-	64	100.000	ENSSHAG00000000671	SRP54	85	100.000	Sarcophilus_harrisii
ENSNGAG00000019806	-	100	87.103	ENSSFOG00015013920	srp54	100	87.103	Scleropages_formosus
ENSNGAG00000019806	-	100	81.273	ENSSMAG00000002441	srp54	100	81.273	Scophthalmus_maximus
ENSNGAG00000019806	-	100	86.508	ENSSDUG00000018586	srp54	100	86.508	Seriola_dumerili
ENSNGAG00000019806	-	100	86.508	ENSSLDG00000010476	srp54	100	86.508	Seriola_lalandi_dorsalis
ENSNGAG00000019806	-	100	89.881	ENSSARG00000002744	SRP54	100	89.881	Sorex_araneus
ENSNGAG00000019806	-	100	89.087	ENSSPUG00000013101	SRP54	100	89.087	Sphenodon_punctatus
ENSNGAG00000019806	-	100	86.706	ENSSPAG00000002354	srp54	100	86.706	Stegastes_partitus
ENSNGAG00000019806	-	100	89.881	ENSSSCG00000001955	SRP54	100	89.881	Sus_scrofa
ENSNGAG00000019806	-	93	87.975	ENSTGUG00000011945	-	95	87.975	Taeniopygia_guttata
ENSNGAG00000019806	-	100	86.111	ENSTRUG00000007057	srp54	100	86.111	Takifugu_rubripes
ENSNGAG00000019806	-	100	85.714	ENSTNIG00000002589	srp54	100	85.714	Tetraodon_nigroviridis
ENSNGAG00000019806	-	87	80.089	ENSTBEG00000011409	SRP54	100	80.089	Tupaia_belangeri
ENSNGAG00000019806	-	100	89.881	ENSTTRG00000000928	SRP54	100	89.881	Tursiops_truncatus
ENSNGAG00000019806	-	100	89.881	ENSUMAG00000011234	SRP54	100	89.881	Ursus_maritimus
ENSNGAG00000019806	-	93	89.030	ENSVPAG00000005668	SRP54	100	89.030	Vicugna_pacos
ENSNGAG00000019806	-	100	89.881	ENSVVUG00000019962	SRP54	100	89.881	Vulpes_vulpes
ENSNGAG00000019806	-	100	76.210	ENSXETG00000012290	srp54	100	76.210	Xenopus_tropicalis
ENSNGAG00000019806	-	87	85.553	ENSXCOG00000004658	srp54	96	85.553	Xiphophorus_couchianus
ENSNGAG00000019806	-	100	86.905	ENSXMAG00000018315	srp54	100	86.905	Xiphophorus_maculatus