EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000019836 (Gene tree)
Gene ID
103747630
Gene Symbol
Cpsf3
Alias
73 kDa
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Minus strand
Length
37635 bases
Position
chrKL203914.1:6292125-6329759
Accession
103747630
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000020297CPSF73-100_CPF11718.88.5e-5511
ENSNGAP00000020297Beta-CaspPF10996.83e-3311
ENSNGAP00000020297Lactamase_BPF00753.271.1e-1811
ENSNGAP00000020297RMMBLPF07521.121.3e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000025966-2329XM_008850133ENSNGAP00000020297684 (aa)XP_008848355UPI0004ED0591
Gene Model
Click here to download ENSNGAG00000019836's gene model file
Pathways
Pathway IDPathway NameSource
ngi03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019836's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000019836Cpsf36539.780ENSNGAG00000010139Ints117439.780
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000019836Cpsf310098.684ENSG00000119203CPSF3100100.000Homo_sapiens
ENSNGAG00000019836Cpsf39985.125ENSAPOG00000022087cpsf39885.125Acanthochromis_polyacanthus
ENSNGAG00000019836Cpsf37396.593ENSAPOG00000012241CPSF39096.579Acanthochromis_polyacanthus
ENSNGAG00000019836Cpsf310098.977ENSAMEG00000008493CPSF310098.977Ailuropoda_melanoleuca
ENSNGAG00000019836Cpsf39282.484ENSACIG00000009846cpsf39982.484Amphilophus_citrinellus
ENSNGAG00000019836Cpsf39286.190ENSACIG00000023663CPSF39986.190Amphilophus_citrinellus
ENSNGAG00000019836Cpsf39985.125ENSAOCG00000022056cpsf39490.646Amphiprion_ocellaris
ENSNGAG00000019836Cpsf39987.794ENSAOCG00000010077CPSF39887.794Amphiprion_ocellaris
ENSNGAG00000019836Cpsf39987.794ENSAPEG00000021167CPSF39887.794Amphiprion_percula
ENSNGAG00000019836Cpsf39985.272ENSAPEG00000019526cpsf39886.287Amphiprion_percula
ENSNGAG00000019836Cpsf39982.941ENSATEG00000014525CPSF39882.941Anabas_testudineus
ENSNGAG00000019836Cpsf39985.147ENSATEG00000003959cpsf39885.147Anabas_testudineus
ENSNGAG00000019836Cpsf39894.643ENSAPLG00000006941CPSF39894.643Anas_platyrhynchos
ENSNGAG00000019836Cpsf39391.811ENSACAG00000001759CPSF39991.811Anolis_carolinensis
ENSNGAG00000019836Cpsf310092.251ENSANAG00000031254CPSF310092.251Aotus_nancymaae
ENSNGAG00000019836Cpsf39785.414ENSACLG00000014484cpsf39985.414Astatotilapia_calliptera
ENSNGAG00000019836Cpsf39286.190ENSACLG00000018846CPSF39986.190Astatotilapia_calliptera
ENSNGAG00000019836Cpsf39987.794ENSAMXG00000004786cpsf39887.794Astyanax_mexicanus
ENSNGAG00000019836Cpsf310098.830ENSBTAG00000019735CPSF310098.830Bos_taurus
ENSNGAG00000019836Cpsf39159.055WBGene00013460cpsf-38959.055Caenorhabditis_elegans
ENSNGAG00000019836Cpsf310098.684ENSCJAG00000006276CPSF310098.684Callithrix_jacchus
ENSNGAG00000019836Cpsf310098.977ENSCAFG00000003375CPSF39598.977Canis_familiaris
ENSNGAG00000019836Cpsf39099.354ENSCAFG00020026799CPSF310099.354Canis_lupus_dingo
ENSNGAG00000019836Cpsf310098.830ENSCHIG00000013973CPSF310098.830Capra_hircus
ENSNGAG00000019836Cpsf310098.684ENSTSYG00000002967CPSF310098.684Carlito_syrichta
ENSNGAG00000019836Cpsf39897.151ENSCAPG00000013851CPSF310097.151Cavia_aperea
ENSNGAG00000019836Cpsf310097.222ENSCPOG00000011299CPSF310097.222Cavia_porcellus
ENSNGAG00000019836Cpsf310098.538ENSCCAG00000036730CPSF310098.538Cebus_capucinus
ENSNGAG00000019836Cpsf310096.058ENSCATG00000014770CPSF39999.484Cercocebus_atys
ENSNGAG00000019836Cpsf310097.076ENSCLAG00000002727CPSF310097.076Chinchilla_lanigera
ENSNGAG00000019836Cpsf310091.228ENSCSAG00000007125CPSF310091.228Chlorocebus_sabaeus
ENSNGAG00000019836Cpsf386100.000ENSCHOG00000000180CPSF38571.754Choloepus_hoffmanni
ENSNGAG00000019836Cpsf39995.308ENSCPBG00000014074CPSF39995.308Chrysemys_picta_bellii
ENSNGAG00000019836Cpsf39967.789ENSCING00000007214-9867.789Ciona_intestinalis
ENSNGAG00000019836Cpsf310085.673ENSCANG00000034435CPSF310085.673Colobus_angolensis_palliatus
ENSNGAG00000019836Cpsf310099.415ENSCGRG00001013134Cpsf310099.415Cricetulus_griseus_chok1gshd
ENSNGAG00000019836Cpsf310099.415ENSCGRG00000018319Cpsf310099.415Cricetulus_griseus_crigri
ENSNGAG00000019836Cpsf39986.637ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSNGAG00000019836Cpsf39988.088ENSCVAG00000015067CPSF39888.088Cyprinodon_variegatus
ENSNGAG00000019836Cpsf39988.676ENSDARG00000027649cpsf39888.676Danio_rerio
ENSNGAG00000019836Cpsf310097.080ENSDNOG00000008940CPSF39597.080Dasypus_novemcinctus
ENSNGAG00000019836Cpsf39598.464ENSDORG00000014263Cpsf310098.464Dipodomys_ordii
ENSNGAG00000019836Cpsf39967.158FBgn0261065Cpsf739867.158Drosophila_melanogaster
ENSNGAG00000019836Cpsf39585.407ENSETEG00000003893CPSF310085.407Echinops_telfairi
ENSNGAG00000019836Cpsf39978.080ENSEBUG00000009018cpsf39878.223Eptatretus_burgeri
ENSNGAG00000019836Cpsf310098.977ENSEASG00005003970CPSF310098.977Equus_asinus_asinus
ENSNGAG00000019836Cpsf310098.977ENSECAG00000019911CPSF310098.977Equus_caballus
ENSNGAG00000019836Cpsf310083.480ENSEEUG00000015422CPSF310083.480Erinaceus_europaeus
ENSNGAG00000019836Cpsf39987.500ENSELUG00000013775cpsf39887.500Esox_lucius
ENSNGAG00000019836Cpsf310098.830ENSFCAG00000007852CPSF310098.830Felis_catus
ENSNGAG00000019836Cpsf39594.745ENSFALG00000006572CPSF310094.745Ficedula_albicollis
ENSNGAG00000019836Cpsf39996.921ENSFDAG00000006317CPSF39996.921Fukomys_damarensis
ENSNGAG00000019836Cpsf35968.780ENSFHEG00000012186CPSF39968.780Fundulus_heteroclitus
ENSNGAG00000019836Cpsf39984.978ENSFHEG00000014774cpsf39884.978Fundulus_heteroclitus
ENSNGAG00000019836Cpsf39986.324ENSGMOG00000003157cpsf39886.324Gadus_morhua
ENSNGAG00000019836Cpsf39994.126ENSGALG00000016424CPSF39994.126Gallus_gallus
ENSNGAG00000019836Cpsf39282.830ENSGAFG00000019449cpsf39982.830Gambusia_affinis
ENSNGAG00000019836Cpsf39988.071ENSGAFG00000008016CPSF39888.071Gambusia_affinis
ENSNGAG00000019836Cpsf36892.934ENSGAGG00000025583CPSF39392.934Gopherus_agassizii
ENSNGAG00000019836Cpsf310096.423ENSGGOG00000001757CPSF310098.740Gorilla_gorilla
ENSNGAG00000019836Cpsf35980.988ENSHBUG00000014332CPSF39980.988Haplochromis_burtoni
ENSNGAG00000019836Cpsf39985.316ENSHBUG00000001188cpsf39985.316Haplochromis_burtoni
ENSNGAG00000019836Cpsf310096.491ENSHGLG00000000666CPSF39996.491Heterocephalus_glaber_female
ENSNGAG00000019836Cpsf310096.491ENSHGLG00100007765CPSF39996.491Heterocephalus_glaber_male
ENSNGAG00000019836Cpsf39986.029ENSHCOG00000015957CPSF39786.029Hippocampus_comes
ENSNGAG00000019836Cpsf39984.457ENSHCOG00000007251cpsf39984.457Hippocampus_comes
ENSNGAG00000019836Cpsf39986.618ENSIPUG00000023488cpsf39886.618Ictalurus_punctatus
ENSNGAG00000019836Cpsf310098.392ENSSTOG00000004476CPSF310098.392Ictidomys_tridecemlineatus
ENSNGAG00000019836Cpsf310098.099ENSJJAG00000023415Cpsf310098.099Jaculus_jaculus
ENSNGAG00000019836Cpsf39987.353ENSKMAG00000007317CPSF39887.353Kryptolebias_marmoratus
ENSNGAG00000019836Cpsf39984.559ENSKMAG00000002806cpsf39884.559Kryptolebias_marmoratus
ENSNGAG00000019836Cpsf39588.752ENSLBEG00000013492CPSF39888.752Labrus_bergylta
ENSNGAG00000019836Cpsf39979.736ENSLBEG00000020569cpsf39479.736Labrus_bergylta
ENSNGAG00000019836Cpsf35579.144ENSLBEG00000015018-9979.144Labrus_bergylta
ENSNGAG00000019836Cpsf39983.505ENSLACG00000008308CPSF39883.505Latimeria_chalumnae
ENSNGAG00000019836Cpsf39988.987ENSLOCG00000016823cpsf39888.987Lepisosteus_oculatus
ENSNGAG00000019836Cpsf39996.912ENSLAFG00000009467CPSF310096.912Loxodonta_africana
ENSNGAG00000019836Cpsf310098.684ENSMFAG00000001339CPSF310098.684Macaca_fascicularis
ENSNGAG00000019836Cpsf39598.609ENSMMUG00000018038CPSF310098.609Macaca_mulatta
ENSNGAG00000019836Cpsf310085.965ENSMNEG00000039447CPSF310085.965Macaca_nemestrina
ENSNGAG00000019836Cpsf310098.830ENSMLEG00000026825CPSF310098.830Mandrillus_leucophaeus
ENSNGAG00000019836Cpsf39985.714ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSNGAG00000019836Cpsf39285.127ENSMAMG00000008835CPSF39985.127Mastacembelus_armatus
ENSNGAG00000019836Cpsf39988.382ENSMZEG00005006258CPSF39888.382Maylandia_zebra
ENSNGAG00000019836Cpsf39985.316ENSMZEG00005014358cpsf39985.316Maylandia_zebra
ENSNGAG00000019836Cpsf39894.153ENSMGAG00000013995CPSF310094.153Meleagris_gallopavo
ENSNGAG00000019836Cpsf35598.138ENSMAUG00000000166Cpsf310098.138Mesocricetus_auratus
ENSNGAG00000019836Cpsf310093.129ENSMICG00000002363CPSF310093.129Microcebus_murinus
ENSNGAG00000019836Cpsf310094.591ENSMOCG00000020067Cpsf310094.591Microtus_ochrogaster
ENSNGAG00000019836Cpsf38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSNGAG00000019836Cpsf39482.326ENSMMOG00000018212CPSF39882.326Mola_mola
ENSNGAG00000019836Cpsf310095.224ENSMODG00000014703CPSF310095.224Monodelphis_domestica
ENSNGAG00000019836Cpsf39985.903ENSMALG00000016416cpsf39985.903Monopterus_albus
ENSNGAG00000019836Cpsf39382.969ENSMALG00000011474CPSF39982.969Monopterus_albus
ENSNGAG00000019836Cpsf310099.123MGP_CAROLIEiJ_G0017640Cpsf310099.123Mus_caroli
ENSNGAG00000019836Cpsf310099.123ENSMUSG00000054309Cpsf310099.123Mus_musculus
ENSNGAG00000019836Cpsf310098.977MGP_PahariEiJ_G0029397Cpsf310098.977Mus_pahari
ENSNGAG00000019836Cpsf310099.123MGP_SPRETEiJ_G0018481Cpsf310099.123Mus_spretus
ENSNGAG00000019836Cpsf310098.246ENSMPUG00000013213CPSF310098.246Mustela_putorius_furo
ENSNGAG00000019836Cpsf310097.956ENSMLUG00000010636CPSF310097.956Myotis_lucifugus
ENSNGAG00000019836Cpsf39286.190ENSNBRG00000010525CPSF39986.190Neolamprologus_brichardi
ENSNGAG00000019836Cpsf39984.875ENSNBRG00000004770cpsf39984.875Neolamprologus_brichardi
ENSNGAG00000019836Cpsf310098.684ENSNLEG00000013359CPSF310098.684Nomascus_leucogenys
ENSNGAG00000019836Cpsf310064.766ENSMEUG00000013117-10064.766Notamacropus_eugenii
ENSNGAG00000019836Cpsf310089.181ENSOPRG00000008902CPSF310089.181Ochotona_princeps
ENSNGAG00000019836Cpsf310096.637ENSODEG00000003129CPSF310096.637Octodon_degus
ENSNGAG00000019836Cpsf39985.463ENSONIG00000018812cpsf39985.463Oreochromis_niloticus
ENSNGAG00000019836Cpsf38295.390ENSOANG00000008577CPSF310095.390Ornithorhynchus_anatinus
ENSNGAG00000019836Cpsf310098.392ENSOCUG00000003728CPSF310098.392Oryctolagus_cuniculus
ENSNGAG00000019836Cpsf39983.407ENSORLG00000018854cpsf39983.407Oryzias_latipes
ENSNGAG00000019836Cpsf39983.260ENSORLG00020013331cpsf39983.260Oryzias_latipes_hni
ENSNGAG00000019836Cpsf39983.407ENSORLG00015011017cpsf39983.407Oryzias_latipes_hsok
ENSNGAG00000019836Cpsf39983.554ENSOMEG00000010647cpsf39483.554Oryzias_melastigma
ENSNGAG00000019836Cpsf310088.743ENSOGAG00000001680CPSF310088.743Otolemur_garnettii
ENSNGAG00000019836Cpsf310098.830ENSOARG00000015073CPSF310098.830Ovis_aries
ENSNGAG00000019836Cpsf310098.830ENSPPAG00000042457CPSF310098.830Pan_paniscus
ENSNGAG00000019836Cpsf310098.538ENSPPRG00000016790CPSF310098.538Panthera_pardus
ENSNGAG00000019836Cpsf39998.529ENSPTIG00000003920CPSF310098.425Panthera_tigris_altaica
ENSNGAG00000019836Cpsf310098.830ENSPTRG00000011638CPSF310098.830Pan_troglodytes
ENSNGAG00000019836Cpsf310098.830ENSPANG00000016798CPSF310098.830Papio_anubis
ENSNGAG00000019836Cpsf39988.971ENSPKIG00000023646cpsf39988.682Paramormyrops_kingsleyae
ENSNGAG00000019836Cpsf39993.265ENSPSIG00000016144CPSF310093.265Pelodiscus_sinensis
ENSNGAG00000019836Cpsf38384.817ENSPMGG00000006141-9984.817Periophthalmus_magnuspinnatus
ENSNGAG00000019836Cpsf35978.519ENSPMGG00000015311CPSF39978.519Periophthalmus_magnuspinnatus
ENSNGAG00000019836Cpsf310098.684ENSPEMG00000017668Cpsf310098.684Peromyscus_maniculatus_bairdii
ENSNGAG00000019836Cpsf37889.944ENSPMAG00000004841cpsf39989.944Petromyzon_marinus
ENSNGAG00000019836Cpsf39896.702ENSPCIG00000009823CPSF39896.779Phascolarctos_cinereus
ENSNGAG00000019836Cpsf39987.776ENSPFOG00000010418-9887.776Poecilia_formosa
ENSNGAG00000019836Cpsf39984.751ENSPFOG00000015922cpsf39984.751Poecilia_formosa
ENSNGAG00000019836Cpsf39984.751ENSPLAG00000000882cpsf39984.751Poecilia_latipinna
ENSNGAG00000019836Cpsf35980.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSNGAG00000019836Cpsf39984.897ENSPMEG00000018309cpsf39984.897Poecilia_mexicana
ENSNGAG00000019836Cpsf39282.671ENSPREG00000014875cpsf39982.671Poecilia_reticulata
ENSNGAG00000019836Cpsf39982.500ENSPREG00000004482CPSF39882.500Poecilia_reticulata
ENSNGAG00000019836Cpsf310094.298ENSPPYG00000012666CPSF310094.298Pongo_abelii
ENSNGAG00000019836Cpsf39563.441ENSPCAG00000015042CPSF310063.441Procavia_capensis
ENSNGAG00000019836Cpsf38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSNGAG00000019836Cpsf39998.974ENSPVAG00000005324CPSF39998.974Pteropus_vampyrus
ENSNGAG00000019836Cpsf37990.976ENSPNYG00000021047CPSF39190.976Pundamilia_nyererei
ENSNGAG00000019836Cpsf39985.316ENSPNYG00000004405cpsf39985.316Pundamilia_nyererei
ENSNGAG00000019836Cpsf39987.353ENSPNAG00000023060cpsf39887.353Pygocentrus_nattereri
ENSNGAG00000019836Cpsf39999.120ENSRNOG00000052418Cpsf39999.120Rattus_norvegicus
ENSNGAG00000019836Cpsf310092.836ENSRBIG00000041615CPSF39994.127Rhinopithecus_bieti
ENSNGAG00000019836Cpsf310098.830ENSRROG00000033792CPSF310098.830Rhinopithecus_roxellana
ENSNGAG00000019836Cpsf39340.671YLR277CYSH19540.671Saccharomyces_cerevisiae
ENSNGAG00000019836Cpsf310092.464ENSSBOG00000027263CPSF310092.464Saimiri_boliviensis_boliviensis
ENSNGAG00000019836Cpsf310096.930ENSSHAG00000007024CPSF310096.930Sarcophilus_harrisii
ENSNGAG00000019836Cpsf39988.987ENSSFOG00015002108cpsf39988.987Scleropages_formosus
ENSNGAG00000019836Cpsf39587.211ENSSMAG00000020534CPSF39587.211Scophthalmus_maximus
ENSNGAG00000019836Cpsf39987.941ENSSDUG00000018498CPSF39887.941Seriola_dumerili
ENSNGAG00000019836Cpsf39985.463ENSSDUG00000002828cpsf39685.463Seriola_dumerili
ENSNGAG00000019836Cpsf39985.463ENSSLDG00000008469cpsf39685.463Seriola_lalandi_dorsalis
ENSNGAG00000019836Cpsf39987.941ENSSLDG00000005234CPSF39887.941Seriola_lalandi_dorsalis
ENSNGAG00000019836Cpsf310080.702ENSSARG00000005186CPSF310080.702Sorex_araneus
ENSNGAG00000019836Cpsf39892.101ENSSPUG00000015525CPSF39792.101Sphenodon_punctatus
ENSNGAG00000019836Cpsf39985.272ENSSPAG00000018579cpsf39885.272Stegastes_partitus
ENSNGAG00000019836Cpsf39987.647ENSSPAG00000002906CPSF39887.647Stegastes_partitus
ENSNGAG00000019836Cpsf39998.829ENSSSCG00000020799CPSF39998.829Sus_scrofa
ENSNGAG00000019836Cpsf39994.860ENSTGUG00000013016CPSF39994.860Taeniopygia_guttata
ENSNGAG00000019836Cpsf35972.973ENSTRUG00000013905CPSF39972.973Takifugu_rubripes
ENSNGAG00000019836Cpsf39984.853ENSTRUG00000007030cpsf39784.853Takifugu_rubripes
ENSNGAG00000019836Cpsf38593.151ENSTBEG00000002707CPSF38593.151Tupaia_belangeri
ENSNGAG00000019836Cpsf38896.774ENSTTRG00000000861CPSF38896.774Tursiops_truncatus
ENSNGAG00000019836Cpsf39995.894ENSUAMG00000007535CPSF39895.894Ursus_americanus
ENSNGAG00000019836Cpsf39598.918ENSUMAG00000003676CPSF310098.918Ursus_maritimus
ENSNGAG00000019836Cpsf39395.268ENSVPAG00000008041CPSF310095.268Vicugna_pacos
ENSNGAG00000019836Cpsf310098.977ENSVVUG00000002194CPSF310098.977Vulpes_vulpes
ENSNGAG00000019836Cpsf39989.574ENSXETG00000008263cpsf39889.574Xenopus_tropicalis
ENSNGAG00000019836Cpsf39985.044ENSXCOG00000019695cpsf39985.044Xiphophorus_couchianus
ENSNGAG00000019836Cpsf35479.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSNGAG00000019836Cpsf39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus
ENSNGAG00000019836Cpsf39984.751ENSXMAG00000009784cpsf39984.751Xiphophorus_maculatus

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