EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000019853 (Gene tree)
Gene ID: -
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 15659 bases
Position: chrKL199407.1:259617-275275
Accession: 103729046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	1	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	2	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	3	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	4	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	5	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	6	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	7	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	8	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	9	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	10	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	11	12
ENSNGAP00000020325	zf-C2H2	PF00096.26	2.9e-57	12	12
ENSNGAP00000020325	zf-met	PF12874.7	1.4e-12	1	2
ENSNGAP00000020325	zf-met	PF12874.7	1.4e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000025994	-	2028	XM_008827016	ENSNGAP00000020325	676 (aa)	XP_008825238	-

Gene Model

Click here to download ENSNGAG00000019853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000019853	Zfp39	62	42.105	ENSNGAG00000022025	Zfp423	99	36.111
ENSNGAG00000019853	Zfp39	74	55.144	ENSNGAG00000014357	Zfp661	87	55.144
ENSNGAG00000019853	Zfp39	78	54.331	ENSNGAG00000014809	2610008E11Rik	94	54.331
ENSNGAG00000019853	Zfp39	61	39.259	ENSNGAG00000023039	Snai3	52	39.259
ENSNGAG00000019853	Zfp39	80	40.541	ENSNGAG00000011056	Zfp236	82	39.333
ENSNGAG00000019853	Zfp39	62	51.439	ENSNGAG00000017870	Zfp768	57	50.694
ENSNGAG00000019853	Zfp39	74	47.607	ENSNGAG00000010473	-	77	47.607
ENSNGAG00000019853	Zfp39	74	44.048	ENSNGAG00000016891	Zfp317	70	45.092
ENSNGAG00000019853	Zfp39	87	48.260	ENSNGAG00000020695	Zfp26	79	48.260
ENSNGAG00000019853	Zfp39	66	46.353	ENSNGAG00000015897	Zfp560	78	46.353
ENSNGAG00000019853	Zfp39	68	35.312	ENSNGAG00000018331	Zfp64	71	35.312
ENSNGAG00000019853	Zfp39	62	33.981	ENSNGAG00000011802	Zfp784	66	33.981
ENSNGAG00000019853	Zfp39	64	44.615	ENSNGAG00000002549	-	100	44.615
ENSNGAG00000019853	Zfp39	62	34.237	ENSNGAG00000018114	Zfp526	81	33.893
ENSNGAG00000019853	Zfp39	92	47.368	ENSNGAG00000015777	Zim1	87	47.368
ENSNGAG00000019853	Zfp39	64	44.134	ENSNGAG00000003333	Gfi1b	58	44.134
ENSNGAG00000019853	Zfp39	67	30.593	ENSNGAG00000001555	Zfp574	93	32.874
ENSNGAG00000019853	Zfp39	92	44.619	ENSNGAG00000011769	Zfp354a	87	43.909
ENSNGAG00000019853	Zfp39	67	43.478	ENSNGAG00000022234	Wt1	55	42.373
ENSNGAG00000019853	Zfp39	63	52.410	ENSNGAG00000000088	Gm3854	67	52.410
ENSNGAG00000019853	Zfp39	64	50.526	ENSNGAG00000019166	Zfp94	87	50.526
ENSNGAG00000019853	Zfp39	61	39.130	ENSNGAG00000020815	Scrt2	66	39.552
ENSNGAG00000019853	Zfp39	74	39.855	ENSNGAG00000018317	Prdm5	70	47.482
ENSNGAG00000019853	Zfp39	74	42.262	ENSNGAG00000016559	-	79	42.262
ENSNGAG00000019853	Zfp39	68	38.323	ENSNGAG00000016004	Zfp865	77	30.352
ENSNGAG00000019853	Zfp39	65	42.453	ENSNGAG00000017185	Snai1	51	42.453
ENSNGAG00000019853	Zfp39	63	38.957	ENSNGAG00000012888	Zfp628	53	47.179
ENSNGAG00000019853	Zfp39	88	54.348	ENSNGAG00000016319	Zfp1	90	54.348
ENSNGAG00000019853	Zfp39	63	35.294	ENSNGAG00000022587	Zfp319	91	34.852
ENSNGAG00000019853	Zfp39	68	60.690	ENSNGAG00000024130	-	98	60.690
ENSNGAG00000019853	Zfp39	62	40.187	ENSNGAG00000009442	-	63	40.187
ENSNGAG00000019853	Zfp39	81	50.526	ENSNGAG00000020281	Zfp637	90	50.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019853	Zfp39	93	62.201	ENSCPOG00000036704	-	95	62.201	Cavia_porcellus
ENSNGAG00000019853	Zfp39	99	70.851	ENSCGRG00001002406	Zfp39	100	70.851	Cricetulus_griseus_chok1gshd
ENSNGAG00000019853	Zfp39	99	70.851	ENSCGRG00000002730	Zfp39	100	70.851	Cricetulus_griseus_crigri
ENSNGAG00000019853	Zfp39	99	70.225	ENSJJAG00000018925	Zfp39	99	70.225	Jaculus_jaculus
ENSNGAG00000019853	Zfp39	99	71.268	ENSMAUG00000001536	Zfp39	99	71.268	Mesocricetus_auratus
ENSNGAG00000019853	Zfp39	99	66.899	ENSMOCG00000017961	Zfp39	99	66.899	Microtus_ochrogaster
ENSNGAG00000019853	Zfp39	99	69.777	MGP_PahariEiJ_G0017548	Zfp39	100	69.777	Mus_pahari
ENSNGAG00000019853	Zfp39	64	77.333	ENSODEG00000000805	-	100	77.333	Octodon_degus
ENSNGAG00000019853	Zfp39	99	71.229	ENSPEMG00000009428	Zfp39	99	71.229	Peromyscus_maniculatus_bairdii
ENSNGAG00000019853	Zfp39	99	66.992	ENSRNOG00000014712	Zfp39	100	66.992	Rattus_norvegicus