EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000019882 (Gene tree)
Gene ID: 103737210
Gene Symbol: Safb
Alias: 3110021E02Rik|5330423C17Rik|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 22658 bases
Position: chrKL201457.1:1164929-1187586
Accession: 103737210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000020422	RRM_5	PF13893.6	2.7e-06	1	1
ENSNGAP00000020431	RRM_5	PF13893.6	2.8e-06	1	1
ENSNGAP00000020422	RRM_1	PF00076.22	3.6e-13	1	1
ENSNGAP00000020431	RRM_1	PF00076.22	3.7e-13	1	1
ENSNGAP00000020422	SAP	PF02037.27	1.3e-10	1	1
ENSNGAP00000020431	SAP	PF02037.27	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000026100	-	2796	XM_008836946	ENSNGAP00000020431	931 (aa)	XP_008835168	-
ENSNGAT00000026091	-	2775	-	ENSNGAP00000020422	924 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000019882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000019882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000019882	Safb	100	82.185	ENSG00000160633	SAFB	100	82.185	Homo_sapiens
ENSNGAG00000019882	Safb	100	80.508	ENSAMEG00000012254	SAFB	100	80.403	Ailuropoda_melanoleuca
ENSNGAG00000019882	Safb	94	39.731	ENSACIG00000006247	safb	52	49.521	Amphilophus_citrinellus
ENSNGAG00000019882	Safb	93	43.473	ENSAOCG00000006308	safb	67	42.834	Amphiprion_ocellaris
ENSNGAG00000019882	Safb	91	43.828	ENSAPEG00000023342	safb	64	42.788	Amphiprion_percula
ENSNGAG00000019882	Safb	94	58.837	ENSAPLG00000005780	-	100	59.322	Anas_platyrhynchos
ENSNGAG00000019882	Safb	90	57.176	ENSAPLG00000006355	-	99	58.796	Anas_platyrhynchos
ENSNGAG00000019882	Safb	100	81.442	ENSANAG00000028821	SAFB	100	81.442	Aotus_nancymaae
ENSNGAG00000019882	Safb	84	56.303	ENSACLG00000001926	safb	51	56.303	Astatotilapia_calliptera
ENSNGAG00000019882	Safb	100	78.975	ENSBTAG00000007875	SAFB	100	79.296	Bos_taurus
ENSNGAG00000019882	Safb	81	86.703	ENSCJAG00000017081	SAFB	99	88.082	Callithrix_jacchus
ENSNGAG00000019882	Safb	100	81.529	ENSCAFG00000018803	SAFB	87	81.847	Canis_familiaris
ENSNGAG00000019882	Safb	100	81.529	ENSCAFG00020018943	SAFB	100	81.847	Canis_lupus_dingo
ENSNGAG00000019882	Safb	100	78.442	ENSCHIG00000007262	SAFB	100	78.762	Capra_hircus
ENSNGAG00000019882	Safb	56	73.408	ENSTSYG00000001851	-	100	70.275	Carlito_syrichta
ENSNGAG00000019882	Safb	93	85.052	ENSCAPG00000012121	SAFB	100	84.021	Cavia_aperea
ENSNGAG00000019882	Safb	100	83.544	ENSCPOG00000026322	SAFB	100	83.650	Cavia_porcellus
ENSNGAG00000019882	Safb	100	81.780	ENSCCAG00000020193	SAFB	100	81.462	Cebus_capucinus
ENSNGAG00000019882	Safb	100	81.760	ENSCATG00000029994	SAFB	100	81.760	Cercocebus_atys
ENSNGAG00000019882	Safb	100	83.121	ENSCLAG00000007734	SAFB	100	84.607	Chinchilla_lanigera
ENSNGAG00000019882	Safb	100	81.654	ENSCSAG00000009949	SAFB	100	81.654	Chlorocebus_sabaeus
ENSNGAG00000019882	Safb	87	97.619	ENSCHOG00000003208	SAFB	100	68.487	Choloepus_hoffmanni
ENSNGAG00000019882	Safb	91	55.617	ENSCPBG00000010936	-	63	51.361	Chrysemys_picta_bellii
ENSNGAG00000019882	Safb	92	59.609	ENSCPBG00000010928	-	99	58.641	Chrysemys_picta_bellii
ENSNGAG00000019882	Safb	95	90.050	ENSCANG00000004774	-	99	90.050	Colobus_angolensis_palliatus
ENSNGAG00000019882	Safb	100	76.776	ENSCANG00000019754	-	100	76.776	Colobus_angolensis_palliatus
ENSNGAG00000019882	Safb	100	87.818	ENSCGRG00001002254	Safb	100	87.818	Cricetulus_griseus_chok1gshd
ENSNGAG00000019882	Safb	90	85.308	ENSCGRG00000011529	Safb	96	85.308	Cricetulus_griseus_crigri
ENSNGAG00000019882	Safb	71	48.462	ENSCSEG00000019870	safb	65	37.748	Cynoglossus_semilaevis
ENSNGAG00000019882	Safb	75	50.794	ENSCVAG00000002226	safb	52	53.543	Cyprinodon_variegatus
ENSNGAG00000019882	Safb	92	39.421	ENSDARG00000020467	safb	60	59.167	Danio_rerio
ENSNGAG00000019882	Safb	100	80.382	ENSDNOG00000015746	SAFB	95	78.088	Dasypus_novemcinctus
ENSNGAG00000019882	Safb	100	78.211	ENSDORG00000016200	Safb	100	78.046	Dipodomys_ordii
ENSNGAG00000019882	Safb	80	82.857	ENSETEG00000018679	SAFB	85	82.857	Echinops_telfairi
ENSNGAG00000019882	Safb	100	80.465	ENSEASG00005023019	SAFB	100	80.253	Equus_asinus_asinus
ENSNGAG00000019882	Safb	100	81.635	ENSECAG00000018659	SAFB	89	82.272	Equus_caballus
ENSNGAG00000019882	Safb	95	42.251	ENSELUG00000022327	safb	58	54.135	Esox_lucius
ENSNGAG00000019882	Safb	100	82.147	ENSFCAG00000011835	SAFB	100	82.147	Felis_catus
ENSNGAG00000019882	Safb	91	52.044	ENSFALG00000013881	-	64	52.389	Ficedula_albicollis
ENSNGAG00000019882	Safb	100	60.860	ENSFALG00000013882	-	92	59.197	Ficedula_albicollis
ENSNGAG00000019882	Safb	100	81.538	ENSFDAG00000020306	SAFB	97	87.582	Fukomys_damarensis
ENSNGAG00000019882	Safb	73	58.036	ENSFHEG00000004219	safb	51	56.410	Fundulus_heteroclitus
ENSNGAG00000019882	Safb	100	61.352	ENSGALG00000013365	-	100	60.064	Gallus_gallus
ENSNGAG00000019882	Safb	100	57.071	ENSGALG00000001948	-	100	57.172	Gallus_gallus
ENSNGAG00000019882	Safb	71	57.016	ENSGAGG00000017702	-	94	56.366	Gopherus_agassizii
ENSNGAG00000019882	Safb	96	56.947	ENSGAGG00000008424	-	97	57.003	Gopherus_agassizii
ENSNGAG00000019882	Safb	100	81.972	ENSGGOG00000015109	SAFB	100	81.972	Gorilla_gorilla
ENSNGAG00000019882	Safb	84	47.863	ENSHBUG00000009218	safb	52	50.314	Haplochromis_burtoni
ENSNGAG00000019882	Safb	100	84.787	ENSHGLG00000015883	SAFB	100	84.894	Heterocephalus_glaber_female
ENSNGAG00000019882	Safb	92	36.457	ENSHCOG00000001705	safb	64	35.666	Hippocampus_comes
ENSNGAG00000019882	Safb	93	84.282	ENSSTOG00000002783	SAFB	100	84.396	Ictidomys_tridecemlineatus
ENSNGAG00000019882	Safb	100	85.759	ENSJJAG00000009021	Safb	100	85.759	Jaculus_jaculus
ENSNGAG00000019882	Safb	66	47.582	ENSLACG00000018090	SAFB	66	48.834	Latimeria_chalumnae
ENSNGAG00000019882	Safb	97	44.715	ENSLOCG00000003613	safb	74	44.597	Lepisosteus_oculatus
ENSNGAG00000019882	Safb	99	80.171	ENSLAFG00000003840	SAFB	100	78.998	Loxodonta_africana
ENSNGAG00000019882	Safb	100	81.674	ENSMFAG00000003885	SAFB	100	81.356	Macaca_fascicularis
ENSNGAG00000019882	Safb	100	81.760	ENSMMUG00000017970	SAFB	100	81.760	Macaca_mulatta
ENSNGAG00000019882	Safb	100	78.602	ENSMNEG00000035637	SAFB	100	78.284	Macaca_nemestrina
ENSNGAG00000019882	Safb	100	76.663	ENSMLEG00000038637	SAFB	88	88.172	Mandrillus_leucophaeus
ENSNGAG00000019882	Safb	96	39.979	ENSMAMG00000003357	safb	59	39.365	Mastacembelus_armatus
ENSNGAG00000019882	Safb	84	56.303	ENSMZEG00005009120	safb	51	56.303	Maylandia_zebra
ENSNGAG00000019882	Safb	97	59.825	ENSMGAG00000001101	-	97	59.887	Meleagris_gallopavo
ENSNGAG00000019882	Safb	90	56.674	ENSMGAG00000001051	-	100	56.792	Meleagris_gallopavo
ENSNGAG00000019882	Safb	51	93.210	ENSMAUG00000005013	Safb	100	93.210	Mesocricetus_auratus
ENSNGAG00000019882	Safb	86	68.278	ENSMICG00000046795	-	98	86.170	Microcebus_murinus
ENSNGAG00000019882	Safb	100	78.072	ENSMICG00000008739	-	100	77.225	Microcebus_murinus
ENSNGAG00000019882	Safb	100	88.123	ENSMOCG00000014040	Safb	100	88.123	Microtus_ochrogaster
ENSNGAG00000019882	Safb	100	67.256	ENSMODG00000001236	SAFB	100	66.840	Monodelphis_domestica
ENSNGAG00000019882	Safb	93	40.839	ENSMALG00000020330	safb	68	40.449	Monopterus_albus
ENSNGAG00000019882	Safb	100	87.885	MGP_CAROLIEiJ_G0021780	Safb	100	87.885	Mus_caroli
ENSNGAG00000019882	Safb	100	87.460	ENSMUSG00000071054	Safb	100	87.460	Mus_musculus
ENSNGAG00000019882	Safb	100	87.792	MGP_PahariEiJ_G0020769	Safb	100	87.792	Mus_pahari
ENSNGAG00000019882	Safb	100	81.423	ENSMPUG00000006123	SAFB	94	81.741	Mustela_putorius_furo
ENSNGAG00000019882	Safb	100	80.978	ENSMLUG00000001081	SAFB	100	80.978	Myotis_lucifugus
ENSNGAG00000019882	Safb	99	78.925	ENSNLEG00000013551	SAFB	100	81.436	Nomascus_leucogenys
ENSNGAG00000019882	Safb	89	77.578	ENSOPRG00000011561	-	100	77.818	Ochotona_princeps
ENSNGAG00000019882	Safb	100	85.244	ENSODEG00000014838	SAFB	100	85.244	Octodon_degus
ENSNGAG00000019882	Safb	90	74.061	ENSOCUG00000014628	SAFB	63	74.312	Oryctolagus_cuniculus
ENSNGAG00000019882	Safb	100	78.344	ENSOGAG00000027769	SAFB	100	77.601	Otolemur_garnettii
ENSNGAG00000019882	Safb	79	70.636	ENSOARG00000007856	-	100	70.771	Ovis_aries
ENSNGAG00000019882	Safb	100	75.347	ENSOARG00000007662	-	100	73.746	Ovis_aries
ENSNGAG00000019882	Safb	100	81.992	ENSPPAG00000035129	SAFB	100	81.674	Pan_paniscus
ENSNGAG00000019882	Safb	100	82.147	ENSPPRG00000017197	SAFB	100	82.147	Panthera_pardus
ENSNGAG00000019882	Safb	100	81.992	ENSPTRG00000010335	SAFB	100	81.674	Pan_troglodytes
ENSNGAG00000019882	Safb	100	81.144	ENSPANG00000007770	SAFB	100	81.250	Papio_anubis
ENSNGAG00000019882	Safb	99	57.785	ENSPSIG00000009367	-	63	54.041	Pelodiscus_sinensis
ENSNGAG00000019882	Safb	100	56.526	ENSPSIG00000011679	-	100	56.593	Pelodiscus_sinensis
ENSNGAG00000019882	Safb	100	89.172	ENSPEMG00000020428	Safb	100	89.172	Peromyscus_maniculatus_bairdii
ENSNGAG00000019882	Safb	57	77.138	ENSPCIG00000009504	-	99	77.576	Phascolarctos_cinereus
ENSNGAG00000019882	Safb	68	52.846	ENSPFOG00000007745	safb	60	52.778	Poecilia_formosa
ENSNGAG00000019882	Safb	100	81.972	ENSPPYG00000009428	SAFB	100	81.972	Pongo_abelii
ENSNGAG00000019882	Safb	100	76.645	ENSPCAG00000006475	SAFB	100	76.539	Procavia_capensis
ENSNGAG00000019882	Safb	100	74.657	ENSPCOG00000014090	SAFB	100	71.822	Propithecus_coquereli
ENSNGAG00000019882	Safb	100	75.265	ENSPVAG00000004913	SAFB	100	75.159	Pteropus_vampyrus
ENSNGAG00000019882	Safb	100	87.606	ENSRNOG00000050543	Safb	100	87.712	Rattus_norvegicus
ENSNGAG00000019882	Safb	100	70.594	ENSRBIG00000042509	SAFB	88	89.247	Rhinopithecus_bieti
ENSNGAG00000019882	Safb	100	81.886	ENSRROG00000029278	SAFB	100	81.568	Rhinopithecus_roxellana
ENSNGAG00000019882	Safb	100	81.866	ENSSBOG00000026291	SAFB	100	81.866	Saimiri_boliviensis_boliviensis
ENSNGAG00000019882	Safb	93	75.882	ENSSARG00000010475	SAFB	100	75.882	Sorex_araneus
ENSNGAG00000019882	Safb	60	48.917	ENSSPUG00000009747	-	99	52.433	Sphenodon_punctatus
ENSNGAG00000019882	Safb	54	47.681	ENSSPUG00000009820	-	99	54.303	Sphenodon_punctatus
ENSNGAG00000019882	Safb	64	54.858	ENSSPAG00000015682	safb	53	57.917	Stegastes_partitus
ENSNGAG00000019882	Safb	100	80.483	ENSSSCG00000013522	SAFB	99	80.923	Sus_scrofa
ENSNGAG00000019882	Safb	97	59.081	ENSTGUG00000000502	-	97	59.932	Taeniopygia_guttata
ENSNGAG00000019882	Safb	68	93.182	ENSTBEG00000013124	-	66	93.182	Tupaia_belangeri
ENSNGAG00000019882	Safb	92	96.825	ENSTTRG00000013588	SAFB	92	96.825	Tursiops_truncatus
ENSNGAG00000019882	Safb	78	80.733	ENSUAMG00000024543	SAFB	91	81.250	Ursus_americanus
ENSNGAG00000019882	Safb	83	87.943	ENSUMAG00000009734	SAFB	88	87.943	Ursus_maritimus
ENSNGAG00000019882	Safb	71	87.692	ENSVPAG00000012043	SAFB	79	87.692	Vicugna_pacos
ENSNGAG00000019882	Safb	100	81.635	ENSVVUG00000013720	SAFB	87	81.953	Vulpes_vulpes
ENSNGAG00000019882	Safb	67	46.751	ENSXETG00000008755	safb	97	50.229	Xenopus_tropicalis