EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000020312 (Gene tree)
Gene ID: 103724600
Gene Symbol: Cpsf2
Alias: 100kDa|2610024B04Rik|Cpsf
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 36264 bases
Position: chrKL205078.1:1879990-1916253
Accession: 103724600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000020982	Beta-Casp	PF10996.8	8.5e-21	1	1
ENSNGAP00000020982	Lactamase_B	PF00753.27	6e-06	1	1
ENSNGAP00000020982	RMMBL	PF07521.12	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000026657	-	3699	XM_008821724	ENSNGAP00000020982	782 (aa)	XP_008819946	UPI0004ED099C

Gene Model

Click here to download ENSNGAG00000020312's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000020312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000020312	Cpsf2	100	98.977	ENSG00000165934	CPSF2	100	98.977	Homo_sapiens
ENSNGAG00000020312	Cpsf2	100	85.805	ENSAPOG00000001242	cpsf2	100	85.805	Acanthochromis_polyacanthus
ENSNGAG00000020312	Cpsf2	100	86.076	ENSACIG00000009331	cpsf2	100	86.076	Amphilophus_citrinellus
ENSNGAG00000020312	Cpsf2	100	85.932	ENSAOCG00000014095	cpsf2	100	85.932	Amphiprion_ocellaris
ENSNGAG00000020312	Cpsf2	100	85.932	ENSAPEG00000009158	cpsf2	100	85.932	Amphiprion_percula
ENSNGAG00000020312	Cpsf2	96	86.184	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSNGAG00000020312	Cpsf2	100	96.306	ENSAPLG00000006330	CPSF2	100	96.306	Anas_platyrhynchos
ENSNGAG00000020312	Cpsf2	100	95.019	ENSACAG00000009245	CPSF2	100	95.019	Anolis_carolinensis
ENSNGAG00000020312	Cpsf2	100	98.977	ENSANAG00000022915	CPSF2	100	98.977	Aotus_nancymaae
ENSNGAG00000020312	Cpsf2	100	85.388	ENSAMXG00000018696	cpsf2	100	85.388	Astyanax_mexicanus
ENSNGAG00000020312	Cpsf2	100	99.233	ENSBTAG00000010227	CPSF2	100	99.233	Bos_taurus
ENSNGAG00000020312	Cpsf2	100	41.218	WBGene00017313	cpsf-2	100	40.898	Caenorhabditis_elegans
ENSNGAG00000020312	Cpsf2	100	98.977	ENSCJAG00000018069	CPSF2	100	98.977	Callithrix_jacchus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSCAFG00000010909	CPSF2	100	99.105	Canis_familiaris
ENSNGAG00000020312	Cpsf2	100	99.105	ENSCAFG00020020670	CPSF2	100	99.105	Canis_lupus_dingo
ENSNGAG00000020312	Cpsf2	100	99.233	ENSCHIG00000023848	CPSF2	100	99.233	Capra_hircus
ENSNGAG00000020312	Cpsf2	100	98.210	ENSTSYG00000009036	CPSF2	100	98.210	Carlito_syrichta
ENSNGAG00000020312	Cpsf2	100	99.233	ENSCPOG00000010899	CPSF2	100	99.233	Cavia_porcellus
ENSNGAG00000020312	Cpsf2	100	98.977	ENSCCAG00000028088	CPSF2	100	98.977	Cebus_capucinus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSCATG00000030132	CPSF2	100	99.105	Cercocebus_atys
ENSNGAG00000020312	Cpsf2	100	99.105	ENSCLAG00000012404	CPSF2	100	99.105	Chinchilla_lanigera
ENSNGAG00000020312	Cpsf2	100	99.105	ENSCSAG00000011300	CPSF2	100	99.105	Chlorocebus_sabaeus
ENSNGAG00000020312	Cpsf2	100	92.455	ENSCHOG00000012904	CPSF2	100	92.455	Choloepus_hoffmanni
ENSNGAG00000020312	Cpsf2	100	96.424	ENSCPBG00000008766	CPSF2	97	96.424	Chrysemys_picta_bellii
ENSNGAG00000020312	Cpsf2	100	54.670	ENSCING00000007881	-	100	54.296	Ciona_intestinalis
ENSNGAG00000020312	Cpsf2	94	99.044	ENSCANG00000041651	CPSF2	100	99.044	Colobus_angolensis_palliatus
ENSNGAG00000020312	Cpsf2	100	98.977	ENSCGRG00001006901	Cpsf2	100	98.977	Cricetulus_griseus_chok1gshd
ENSNGAG00000020312	Cpsf2	100	98.977	ENSCGRG00000012416	Cpsf2	100	98.977	Cricetulus_griseus_crigri
ENSNGAG00000020312	Cpsf2	100	83.650	ENSCSEG00000004116	cpsf2	100	83.650	Cynoglossus_semilaevis
ENSNGAG00000020312	Cpsf2	100	85.044	ENSCVAG00000000095	cpsf2	100	85.171	Cyprinodon_variegatus
ENSNGAG00000020312	Cpsf2	100	85.570	ENSDARG00000028971	cpsf2	100	85.570	Danio_rerio
ENSNGAG00000020312	Cpsf2	100	99.105	ENSDNOG00000042757	CPSF2	100	99.105	Dasypus_novemcinctus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSDORG00000013709	Cpsf2	100	99.105	Dipodomys_ordii
ENSNGAG00000020312	Cpsf2	100	53.549	FBgn0027873	Cpsf100	100	53.308	Drosophila_melanogaster
ENSNGAG00000020312	Cpsf2	100	90.038	ENSETEG00000012123	CPSF2	100	90.038	Echinops_telfairi
ENSNGAG00000020312	Cpsf2	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSNGAG00000020312	Cpsf2	91	97.270	ENSEASG00005021193	CPSF2	100	97.270	Equus_asinus_asinus
ENSNGAG00000020312	Cpsf2	100	98.977	ENSECAG00000023935	CPSF2	100	98.977	Equus_caballus
ENSNGAG00000020312	Cpsf2	100	83.940	ENSELUG00000008442	cpsf2	100	83.940	Esox_lucius
ENSNGAG00000020312	Cpsf2	100	99.105	ENSFCAG00000007886	CPSF2	100	99.105	Felis_catus
ENSNGAG00000020312	Cpsf2	100	96.552	ENSFALG00000002412	CPSF2	100	96.552	Ficedula_albicollis
ENSNGAG00000020312	Cpsf2	100	99.105	ENSFDAG00000006327	CPSF2	100	99.105	Fukomys_damarensis
ENSNGAG00000020312	Cpsf2	96	84.314	ENSFHEG00000015465	cpsf2	98	84.706	Fundulus_heteroclitus
ENSNGAG00000020312	Cpsf2	100	83.207	ENSGMOG00000008761	cpsf2	100	83.207	Gadus_morhua
ENSNGAG00000020312	Cpsf2	100	95.785	ENSGALG00000010783	CPSF2	100	96.296	Gallus_gallus
ENSNGAG00000020312	Cpsf2	100	85.298	ENSGAFG00000001407	cpsf2	100	85.298	Gambusia_affinis
ENSNGAG00000020312	Cpsf2	100	84.411	ENSGACG00000008418	cpsf2	100	84.411	Gasterosteus_aculeatus
ENSNGAG00000020312	Cpsf2	100	96.552	ENSGAGG00000008287	CPSF2	100	96.552	Gopherus_agassizii
ENSNGAG00000020312	Cpsf2	100	98.977	ENSGGOG00000011799	CPSF2	100	98.977	Gorilla_gorilla
ENSNGAG00000020312	Cpsf2	100	85.044	ENSHBUG00000023466	cpsf2	100	85.044	Haplochromis_burtoni
ENSNGAG00000020312	Cpsf2	100	98.977	ENSHGLG00000018311	CPSF2	100	98.977	Heterocephalus_glaber_female
ENSNGAG00000020312	Cpsf2	100	98.977	ENSHGLG00100016460	CPSF2	100	98.977	Heterocephalus_glaber_male
ENSNGAG00000020312	Cpsf2	100	84.411	ENSHCOG00000019527	cpsf2	98	84.411	Hippocampus_comes
ENSNGAG00000020312	Cpsf2	100	85.515	ENSIPUG00000020857	cpsf2	100	85.515	Ictalurus_punctatus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSSTOG00000009528	CPSF2	100	99.105	Ictidomys_tridecemlineatus
ENSNGAG00000020312	Cpsf2	100	99.233	ENSJJAG00000017925	Cpsf2	100	99.233	Jaculus_jaculus
ENSNGAG00000020312	Cpsf2	100	84.664	ENSKMAG00000019429	cpsf2	100	84.664	Kryptolebias_marmoratus
ENSNGAG00000020312	Cpsf2	95	83.936	ENSLBEG00000011585	cpsf2	100	84.091	Labrus_bergylta
ENSNGAG00000020312	Cpsf2	100	89.911	ENSLACG00000019024	CPSF2	100	90.166	Latimeria_chalumnae
ENSNGAG00000020312	Cpsf2	100	87.579	ENSLOCG00000014102	cpsf2	100	87.579	Lepisosteus_oculatus
ENSNGAG00000020312	Cpsf2	100	98.724	ENSLAFG00000004891	CPSF2	100	98.724	Loxodonta_africana
ENSNGAG00000020312	Cpsf2	100	99.105	ENSMFAG00000041212	CPSF2	100	99.105	Macaca_fascicularis
ENSNGAG00000020312	Cpsf2	100	99.105	ENSMMUG00000000699	CPSF2	100	99.105	Macaca_mulatta
ENSNGAG00000020312	Cpsf2	100	99.105	ENSMNEG00000031584	CPSF2	100	99.105	Macaca_nemestrina
ENSNGAG00000020312	Cpsf2	100	99.105	ENSMLEG00000029394	CPSF2	100	99.105	Mandrillus_leucophaeus
ENSNGAG00000020312	Cpsf2	100	85.805	ENSMAMG00000004235	cpsf2	100	85.805	Mastacembelus_armatus
ENSNGAG00000020312	Cpsf2	100	85.171	ENSMZEG00005001769	cpsf2	100	85.171	Maylandia_zebra
ENSNGAG00000020312	Cpsf2	100	96.301	ENSMGAG00000013122	CPSF2	100	96.301	Meleagris_gallopavo
ENSNGAG00000020312	Cpsf2	100	98.849	ENSMAUG00000015160	Cpsf2	100	98.849	Mesocricetus_auratus
ENSNGAG00000020312	Cpsf2	100	99.233	ENSMICG00000016441	CPSF2	100	99.233	Microcebus_murinus
ENSNGAG00000020312	Cpsf2	100	98.977	ENSMOCG00000015372	Cpsf2	100	98.977	Microtus_ochrogaster
ENSNGAG00000020312	Cpsf2	100	81.115	ENSMMOG00000015590	cpsf2	100	81.115	Mola_mola
ENSNGAG00000020312	Cpsf2	100	98.593	ENSMODG00000002042	CPSF2	100	98.593	Monodelphis_domestica
ENSNGAG00000020312	Cpsf2	100	82.510	ENSMALG00000022275	cpsf2	100	82.510	Monopterus_albus
ENSNGAG00000020312	Cpsf2	100	98.721	ENSMUSG00000041781	Cpsf2	100	98.721	Mus_musculus
ENSNGAG00000020312	Cpsf2	100	98.977	MGP_PahariEiJ_G0029791	Cpsf2	100	98.977	Mus_pahari
ENSNGAG00000020312	Cpsf2	100	98.721	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.721	Mus_spretus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSMPUG00000007617	CPSF2	98	99.105	Mustela_putorius_furo
ENSNGAG00000020312	Cpsf2	100	98.721	ENSMLUG00000005570	CPSF2	100	98.721	Myotis_lucifugus
ENSNGAG00000020312	Cpsf2	100	85.551	ENSNBRG00000022402	cpsf2	100	85.551	Neolamprologus_brichardi
ENSNGAG00000020312	Cpsf2	100	98.082	ENSNLEG00000017132	CPSF2	100	98.082	Nomascus_leucogenys
ENSNGAG00000020312	Cpsf2	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSNGAG00000020312	Cpsf2	94	91.257	ENSOPRG00000008484	-	100	91.257	Ochotona_princeps
ENSNGAG00000020312	Cpsf2	100	99.105	ENSODEG00000008682	CPSF2	100	99.105	Octodon_degus
ENSNGAG00000020312	Cpsf2	100	85.932	ENSONIG00000005901	cpsf2	100	85.932	Oreochromis_niloticus
ENSNGAG00000020312	Cpsf2	100	97.954	ENSOANG00000003822	CPSF2	100	97.954	Ornithorhynchus_anatinus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSOCUG00000005713	CPSF2	100	99.105	Oryctolagus_cuniculus
ENSNGAG00000020312	Cpsf2	100	79.848	ENSORLG00000011628	cpsf2	100	79.848	Oryzias_latipes
ENSNGAG00000020312	Cpsf2	100	84.537	ENSORLG00020016980	cpsf2	100	84.537	Oryzias_latipes_hni
ENSNGAG00000020312	Cpsf2	100	84.537	ENSORLG00015011910	cpsf2	100	84.537	Oryzias_latipes_hsok
ENSNGAG00000020312	Cpsf2	100	83.904	ENSOMEG00000022876	cpsf2	100	83.904	Oryzias_melastigma
ENSNGAG00000020312	Cpsf2	100	96.173	ENSOARG00000012889	CPSF2	100	96.173	Ovis_aries
ENSNGAG00000020312	Cpsf2	100	98.977	ENSPPAG00000039666	CPSF2	100	98.977	Pan_paniscus
ENSNGAG00000020312	Cpsf2	99	99.104	ENSPPRG00000010869	CPSF2	100	99.104	Panthera_pardus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSPTIG00000021202	CPSF2	100	99.105	Panthera_tigris_altaica
ENSNGAG00000020312	Cpsf2	100	98.977	ENSPTRG00000006651	CPSF2	100	98.977	Pan_troglodytes
ENSNGAG00000020312	Cpsf2	100	99.105	ENSPANG00000017417	CPSF2	100	99.105	Papio_anubis
ENSNGAG00000020312	Cpsf2	100	81.576	ENSPKIG00000021453	cpsf2	100	81.576	Paramormyrops_kingsleyae
ENSNGAG00000020312	Cpsf2	100	95.658	ENSPSIG00000006289	CPSF2	100	95.658	Pelodiscus_sinensis
ENSNGAG00000020312	Cpsf2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSNGAG00000020312	Cpsf2	100	99.233	ENSPEMG00000007917	Cpsf2	100	99.233	Peromyscus_maniculatus_bairdii
ENSNGAG00000020312	Cpsf2	100	74.589	ENSPMAG00000006205	cpsf2	100	74.589	Petromyzon_marinus
ENSNGAG00000020312	Cpsf2	100	98.593	ENSPCIG00000011393	CPSF2	100	98.593	Phascolarctos_cinereus
ENSNGAG00000020312	Cpsf2	100	85.171	ENSPFOG00000018648	cpsf2	100	85.171	Poecilia_formosa
ENSNGAG00000020312	Cpsf2	100	85.171	ENSPLAG00000019199	cpsf2	99	85.171	Poecilia_latipinna
ENSNGAG00000020312	Cpsf2	96	85.526	ENSPMEG00000012100	cpsf2	100	84.893	Poecilia_mexicana
ENSNGAG00000020312	Cpsf2	100	85.044	ENSPREG00000008960	cpsf2	100	85.044	Poecilia_reticulata
ENSNGAG00000020312	Cpsf2	63	98.589	ENSPPYG00000029685	-	100	98.589	Pongo_abelii
ENSNGAG00000020312	Cpsf2	100	98.593	ENSPCAG00000012477	CPSF2	100	98.593	Procavia_capensis
ENSNGAG00000020312	Cpsf2	100	98.977	ENSPCOG00000026387	CPSF2	100	98.977	Propithecus_coquereli
ENSNGAG00000020312	Cpsf2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSNGAG00000020312	Cpsf2	100	85.190	ENSPNYG00000023356	cpsf2	100	85.190	Pundamilia_nyererei
ENSNGAG00000020312	Cpsf2	100	86.531	ENSPNAG00000001849	cpsf2	100	86.531	Pygocentrus_nattereri
ENSNGAG00000020312	Cpsf2	100	99.105	ENSRNOG00000005733	Cpsf2	100	99.105	Rattus_norvegicus
ENSNGAG00000020312	Cpsf2	100	99.105	ENSRBIG00000044792	CPSF2	100	99.105	Rhinopithecus_bieti
ENSNGAG00000020312	Cpsf2	100	99.105	ENSRROG00000034875	CPSF2	100	99.105	Rhinopithecus_roxellana
ENSNGAG00000020312	Cpsf2	100	98.977	ENSSBOG00000024571	CPSF2	100	98.977	Saimiri_boliviensis_boliviensis
ENSNGAG00000020312	Cpsf2	100	98.721	ENSSHAG00000010458	CPSF2	100	98.721	Sarcophilus_harrisii
ENSNGAG00000020312	Cpsf2	100	87.039	ENSSFOG00015002117	cpsf2	100	87.039	Scleropages_formosus
ENSNGAG00000020312	Cpsf2	100	83.904	ENSSMAG00000002001	cpsf2	100	83.904	Scophthalmus_maximus
ENSNGAG00000020312	Cpsf2	100	86.058	ENSSDUG00000004084	cpsf2	100	86.058	Seriola_dumerili
ENSNGAG00000020312	Cpsf2	100	85.551	ENSSLDG00000024330	cpsf2	100	85.551	Seriola_lalandi_dorsalis
ENSNGAG00000020312	Cpsf2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSNGAG00000020312	Cpsf2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSNGAG00000020312	Cpsf2	100	85.044	ENSSPAG00000013284	cpsf2	100	85.044	Stegastes_partitus
ENSNGAG00000020312	Cpsf2	100	98.977	ENSSSCG00000002447	CPSF2	100	98.977	Sus_scrofa
ENSNGAG00000020312	Cpsf2	100	96.679	ENSTGUG00000012571	-	100	96.679	Taeniopygia_guttata
ENSNGAG00000020312	Cpsf2	100	84.537	ENSTRUG00000003742	cpsf2	100	84.537	Takifugu_rubripes
ENSNGAG00000020312	Cpsf2	100	83.312	ENSTNIG00000012228	cpsf2	100	84.071	Tetraodon_nigroviridis
ENSNGAG00000020312	Cpsf2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSNGAG00000020312	Cpsf2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSNGAG00000020312	Cpsf2	100	99.233	ENSUAMG00000028071	CPSF2	100	99.233	Ursus_americanus
ENSNGAG00000020312	Cpsf2	100	99.233	ENSUMAG00000005029	CPSF2	100	99.233	Ursus_maritimus
ENSNGAG00000020312	Cpsf2	99	99.104	ENSVPAG00000003503	CPSF2	100	99.104	Vicugna_pacos
ENSNGAG00000020312	Cpsf2	100	99.105	ENSVVUG00000024642	CPSF2	100	99.105	Vulpes_vulpes
ENSNGAG00000020312	Cpsf2	100	92.082	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSNGAG00000020312	Cpsf2	100	85.551	ENSXCOG00000001764	cpsf2	100	85.551	Xiphophorus_couchianus
ENSNGAG00000020312	Cpsf2	100	85.678	ENSXMAG00000017048	cpsf2	100	85.678	Xiphophorus_maculatus