EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000020702 (Gene tree)
Gene ID: 103746925
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|CAGH26|D130023A07Rik|Tnrc6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 87187 bases
Position: chrKL203746.1:718706-805892
Accession: 103746925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000021584	Ago_hook	PF10427.9	6.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000027265	-	5706	XM_008849202	ENSNGAP00000021584	1901 (aa)	XP_008847424	-

Gene Model

Click here to download ENSNGAG00000020702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000020702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000020702	Tnrc6a	97	39.584	ENSNGAG00000012203	Tnrc6c	99	39.872
ENSNGAG00000020702	Tnrc6a	97	36.763	ENSNGAG00000021294	Tnrc6b	98	37.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000020702	Tnrc6a	100	95.607	ENSG00000090905	TNRC6A	99	95.659	Homo_sapiens
ENSNGAG00000020702	Tnrc6a	98	92.581	ENSAMEG00000009333	TNRC6A	99	92.577	Ailuropoda_melanoleuca
ENSNGAG00000020702	Tnrc6a	97	79.372	ENSAPLG00000009978	TNRC6A	100	79.319	Anas_platyrhynchos
ENSNGAG00000020702	Tnrc6a	99	53.084	ENSACAG00000011857	TNRC6A	99	54.968	Anolis_carolinensis
ENSNGAG00000020702	Tnrc6a	100	95.595	ENSANAG00000025252	TNRC6A	99	95.752	Aotus_nancymaae
ENSNGAG00000020702	Tnrc6a	91	57.151	ENSAMXG00000019919	tnrc6a	99	57.218	Astyanax_mexicanus
ENSNGAG00000020702	Tnrc6a	100	94.482	ENSBTAG00000017999	TNRC6A	99	94.167	Bos_taurus
ENSNGAG00000020702	Tnrc6a	100	92.677	ENSCJAG00000020677	TNRC6A	99	93.863	Callithrix_jacchus
ENSNGAG00000020702	Tnrc6a	98	94.901	ENSCAFG00000017531	TNRC6A	99	94.901	Canis_familiaris
ENSNGAG00000020702	Tnrc6a	98	92.815	ENSCAFG00020021160	TNRC6A	99	93.653	Canis_lupus_dingo
ENSNGAG00000020702	Tnrc6a	100	94.482	ENSCHIG00000019448	TNRC6A	99	94.470	Capra_hircus
ENSNGAG00000020702	Tnrc6a	100	95.597	ENSTSYG00000012711	TNRC6A	99	95.650	Carlito_syrichta
ENSNGAG00000020702	Tnrc6a	100	95.844	ENSCPOG00000036684	TNRC6A	100	95.792	Cavia_porcellus
ENSNGAG00000020702	Tnrc6a	100	95.495	ENSCCAG00000033664	TNRC6A	99	95.547	Cebus_capucinus
ENSNGAG00000020702	Tnrc6a	99	95.168	ENSCATG00000019284	TNRC6A	99	95.168	Cercocebus_atys
ENSNGAG00000020702	Tnrc6a	100	90.409	ENSCLAG00000010217	TNRC6A	99	90.566	Chinchilla_lanigera
ENSNGAG00000020702	Tnrc6a	100	93.160	ENSCSAG00000006561	TNRC6A	99	93.160	Chlorocebus_sabaeus
ENSNGAG00000020702	Tnrc6a	95	88.163	ENSCHOG00000009374	TNRC6A	94	88.095	Choloepus_hoffmanni
ENSNGAG00000020702	Tnrc6a	91	81.362	ENSCPBG00000001881	TNRC6A	99	81.362	Chrysemys_picta_bellii
ENSNGAG00000020702	Tnrc6a	100	95.964	ENSCANG00000041549	TNRC6A	99	95.597	Colobus_angolensis_palliatus
ENSNGAG00000020702	Tnrc6a	100	95.273	ENSCGRG00001015021	Tnrc6a	99	95.483	Cricetulus_griseus_chok1gshd
ENSNGAG00000020702	Tnrc6a	100	94.281	ENSCGRG00000013351	Tnrc6a	99	94.544	Cricetulus_griseus_crigri
ENSNGAG00000020702	Tnrc6a	91	56.614	ENSDARG00000079688	tnrc6a	99	56.814	Danio_rerio
ENSNGAG00000020702	Tnrc6a	98	90.990	ENSDNOG00000013989	TNRC6A	99	90.885	Dasypus_novemcinctus
ENSNGAG00000020702	Tnrc6a	98	84.462	ENSETEG00000014658	TNRC6A	99	84.514	Echinops_telfairi
ENSNGAG00000020702	Tnrc6a	100	95.373	ENSEASG00005017693	TNRC6A	99	95.478	Equus_asinus_asinus
ENSNGAG00000020702	Tnrc6a	98	95.205	ENSECAG00000025056	TNRC6A	99	95.312	Equus_caballus
ENSNGAG00000020702	Tnrc6a	98	85.804	ENSEEUG00000004530	TNRC6A	99	85.856	Erinaceus_europaeus
ENSNGAG00000020702	Tnrc6a	100	93.911	ENSFCAG00000025236	TNRC6A	99	93.963	Felis_catus
ENSNGAG00000020702	Tnrc6a	100	76.138	ENSFALG00000003757	TNRC6A	99	77.289	Ficedula_albicollis
ENSNGAG00000020702	Tnrc6a	91	81.682	ENSGALG00000006068	TNRC6A	99	82.085	Gallus_gallus
ENSNGAG00000020702	Tnrc6a	91	80.517	ENSGAGG00000023209	TNRC6A	99	80.805	Gopherus_agassizii
ENSNGAG00000020702	Tnrc6a	99	95.308	ENSGGOG00000005137	TNRC6A	99	95.361	Gorilla_gorilla
ENSNGAG00000020702	Tnrc6a	100	71.744	ENSHGLG00000007368	-	99	71.534	Heterocephalus_glaber_female
ENSNGAG00000020702	Tnrc6a	99	93.158	ENSHGLG00000012474	-	100	93.158	Heterocephalus_glaber_female
ENSNGAG00000020702	Tnrc6a	99	93.094	ENSHGLG00100012496	-	100	93.042	Heterocephalus_glaber_male
ENSNGAG00000020702	Tnrc6a	100	92.363	ENSSTOG00000023394	TNRC6A	99	92.413	Ictidomys_tridecemlineatus
ENSNGAG00000020702	Tnrc6a	97	67.306	ENSLACG00000006277	TNRC6A	100	67.979	Latimeria_chalumnae
ENSNGAG00000020702	Tnrc6a	100	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSNGAG00000020702	Tnrc6a	98	94.346	ENSLAFG00000004209	TNRC6A	99	94.235	Loxodonta_africana
ENSNGAG00000020702	Tnrc6a	100	95.702	ENSMMUG00000020428	TNRC6A	99	95.755	Macaca_mulatta
ENSNGAG00000020702	Tnrc6a	100	95.099	ENSMNEG00000034854	TNRC6A	99	95.099	Macaca_nemestrina
ENSNGAG00000020702	Tnrc6a	99	89.650	ENSMLEG00000042737	TNRC6A	99	89.802	Mandrillus_leucophaeus
ENSNGAG00000020702	Tnrc6a	100	76.896	ENSMGAG00000006455	TNRC6A	99	77.401	Meleagris_gallopavo
ENSNGAG00000020702	Tnrc6a	100	95.373	ENSMAUG00000012750	Tnrc6a	99	95.426	Mesocricetus_auratus
ENSNGAG00000020702	Tnrc6a	100	96.391	ENSMICG00000030685	TNRC6A	99	96.391	Microcebus_murinus
ENSNGAG00000020702	Tnrc6a	100	95.686	ENSMOCG00000000152	Tnrc6a	99	95.529	Microtus_ochrogaster
ENSNGAG00000020702	Tnrc6a	100	78.265	ENSMODG00000016348	TNRC6A	99	79.163	Monodelphis_domestica
ENSNGAG00000020702	Tnrc6a	99	94.168	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	93.955	Mus_caroli
ENSNGAG00000020702	Tnrc6a	100	94.845	ENSMUSG00000052707	Tnrc6a	99	94.687	Mus_musculus
ENSNGAG00000020702	Tnrc6a	99	94.966	MGP_PahariEiJ_G0013635	Tnrc6a	99	94.807	Mus_pahari
ENSNGAG00000020702	Tnrc6a	100	92.308	MGP_SPRETEiJ_G0031539	Tnrc6a	100	92.357	Mus_spretus
ENSNGAG00000020702	Tnrc6a	97	83.765	ENSMPUG00000012324	TNRC6A	100	83.603	Mustela_putorius_furo
ENSNGAG00000020702	Tnrc6a	97	90.042	ENSMLUG00000002701	TNRC6A	100	89.937	Myotis_lucifugus
ENSNGAG00000020702	Tnrc6a	97	93.585	ENSNLEG00000011851	TNRC6A	98	93.693	Nomascus_leucogenys
ENSNGAG00000020702	Tnrc6a	77	84.053	ENSMEUG00000015959	-	77	84.053	Notamacropus_eugenii
ENSNGAG00000020702	Tnrc6a	96	98.881	ENSOPRG00000005819	TNRC6A	96	98.881	Ochotona_princeps
ENSNGAG00000020702	Tnrc6a	99	88.812	ENSODEG00000012802	TNRC6A	99	89.024	Octodon_degus
ENSNGAG00000020702	Tnrc6a	87	79.618	ENSOANG00000007672	TNRC6A	99	79.592	Ornithorhynchus_anatinus
ENSNGAG00000020702	Tnrc6a	97	90.205	ENSOCUG00000004325	TNRC6A	100	90.205	Oryctolagus_cuniculus
ENSNGAG00000020702	Tnrc6a	99	93.550	ENSOGAG00000006666	TNRC6A	100	93.550	Otolemur_garnettii
ENSNGAG00000020702	Tnrc6a	99	91.204	ENSOARG00000017950	TNRC6A	98	94.820	Ovis_aries
ENSNGAG00000020702	Tnrc6a	100	95.305	ENSPPAG00000028379	TNRC6A	100	95.357	Pan_paniscus
ENSNGAG00000020702	Tnrc6a	100	93.911	ENSPPRG00000005861	TNRC6A	99	93.963	Panthera_pardus
ENSNGAG00000020702	Tnrc6a	100	92.734	ENSPTIG00000006346	TNRC6A	99	92.734	Panthera_tigris_altaica
ENSNGAG00000020702	Tnrc6a	99	91.249	ENSPTRG00000007898	TNRC6A	99	92.452	Pan_troglodytes
ENSNGAG00000020702	Tnrc6a	100	92.950	ENSPANG00000018523	TNRC6A	99	93.003	Papio_anubis
ENSNGAG00000020702	Tnrc6a	87	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSNGAG00000020702	Tnrc6a	77	77.380	ENSPSIG00000003965	TNRC6A	100	77.380	Pelodiscus_sinensis
ENSNGAG00000020702	Tnrc6a	100	95.318	ENSPEMG00000016318	Tnrc6a	100	95.266	Peromyscus_maniculatus_bairdii
ENSNGAG00000020702	Tnrc6a	97	82.265	ENSPCIG00000012106	TNRC6A	100	82.479	Phascolarctos_cinereus
ENSNGAG00000020702	Tnrc6a	100	92.359	ENSPPYG00000007202	TNRC6A	100	92.359	Pongo_abelii
ENSNGAG00000020702	Tnrc6a	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSNGAG00000020702	Tnrc6a	100	94.087	ENSPCOG00000010134	TNRC6A	99	94.087	Propithecus_coquereli
ENSNGAG00000020702	Tnrc6a	89	68.718	ENSPVAG00000012066	TNRC6A	99	69.063	Pteropus_vampyrus
ENSNGAG00000020702	Tnrc6a	100	94.050	ENSRNOG00000024737	Tnrc6a	99	94.311	Rattus_norvegicus
ENSNGAG00000020702	Tnrc6a	98	95.596	ENSRBIG00000014222	TNRC6A	99	95.650	Rhinopithecus_bieti
ENSNGAG00000020702	Tnrc6a	100	93.497	ENSRROG00000032360	TNRC6A	99	93.497	Rhinopithecus_roxellana
ENSNGAG00000020702	Tnrc6a	98	92.651	ENSSBOG00000036197	TNRC6A	99	93.698	Saimiri_boliviensis_boliviensis
ENSNGAG00000020702	Tnrc6a	91	83.087	ENSSHAG00000008811	TNRC6A	99	83.542	Sarcophilus_harrisii
ENSNGAG00000020702	Tnrc6a	91	58.241	ENSSFOG00015008920	tnrc6a	99	58.023	Scleropages_formosus
ENSNGAG00000020702	Tnrc6a	71	75.181	ENSSARG00000002479	TNRC6A	89	75.676	Sorex_araneus
ENSNGAG00000020702	Tnrc6a	90	77.432	ENSSPUG00000010525	TNRC6A	100	77.490	Sphenodon_punctatus
ENSNGAG00000020702	Tnrc6a	100	94.569	ENSSSCG00000038870	TNRC6A	100	96.629	Sus_scrofa
ENSNGAG00000020702	Tnrc6a	100	78.975	ENSTGUG00000006142	TNRC6A	99	79.759	Taeniopygia_guttata
ENSNGAG00000020702	Tnrc6a	98	90.862	ENSTBEG00000014965	TNRC6A	99	90.909	Tupaia_belangeri
ENSNGAG00000020702	Tnrc6a	93	92.449	ENSTTRG00000002008	TNRC6A	93	92.449	Tursiops_truncatus
ENSNGAG00000020702	Tnrc6a	79	94.856	ENSUAMG00000006656	-	93	94.856	Ursus_americanus
ENSNGAG00000020702	Tnrc6a	99	91.528	ENSUMAG00000008274	TNRC6A	100	96.448	Ursus_maritimus
ENSNGAG00000020702	Tnrc6a	55	84.939	ENSVPAG00000010764	-	57	84.939	Vicugna_pacos
ENSNGAG00000020702	Tnrc6a	99	94.773	ENSVVUG00000005380	TNRC6A	99	94.773	Vulpes_vulpes
ENSNGAG00000020702	Tnrc6a	94	64.090	ENSXETG00000030437	TNRC6A	99	64.332	Xenopus_tropicalis