EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000020807 (Gene tree)
Gene ID: 103726792
Gene Symbol: Srrm4
Alias: 1500001A10Rik|B230202K19Rik|bv|flopsy|fp|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 162243 bases
Position: chrKL205467.1:816138-978380
Accession: 103726792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000021705	SRRM_C	PF15230.6	1.4e-24	1	1
ENSNGAP00000021711	SRRM_C	PF15230.6	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000027392	-	1680	-	ENSNGAP00000021711	559 (aa)	-	-
ENSNGAT00000027386	-	1815	XM_008824421	ENSNGAP00000021705	604 (aa)	XP_008822643	UPI0004ED2DFA

Gene Model

Click here to download ENSNGAG00000020807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000020807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000020807	Srrm4	87	89.101	ENSG00000139767	SRRM4	85	89.101	Homo_sapiens
ENSNGAG00000020807	Srrm4	86	45.336	ENSACAG00000004139	SRRM4	88	48.885	Anolis_carolinensis
ENSNGAG00000020807	Srrm4	53	90.062	ENSANAG00000020333	SRRM4	60	83.569	Aotus_nancymaae
ENSNGAG00000020807	Srrm4	87	87.380	ENSBTAG00000008676	SRRM4	87	87.380	Bos_taurus
ENSNGAG00000020807	Srrm4	87	89.293	ENSCJAG00000009146	SRRM4	85	89.293	Callithrix_jacchus
ENSNGAG00000020807	Srrm4	86	89.251	ENSCAFG00000023113	SRRM4	86	89.293	Canis_familiaris
ENSNGAG00000020807	Srrm4	52	88.013	ENSCAFG00020018665	SRRM4	56	88.088	Canis_lupus_dingo
ENSNGAG00000020807	Srrm4	87	68.750	ENSCHIG00000019151	SRRM4	85	65.028	Capra_hircus
ENSNGAG00000020807	Srrm4	79	87.292	ENSTSYG00000012239	SRRM4	84	87.292	Carlito_syrichta
ENSNGAG00000020807	Srrm4	85	81.942	ENSCAPG00000008729	SRRM4	88	87.366	Cavia_aperea
ENSNGAG00000020807	Srrm4	87	88.528	ENSCPOG00000003544	SRRM4	86	88.528	Cavia_porcellus
ENSNGAG00000020807	Srrm4	87	89.101	ENSCCAG00000022479	SRRM4	86	89.101	Cebus_capucinus
ENSNGAG00000020807	Srrm4	87	88.337	ENSCATG00000036343	SRRM4	85	88.337	Cercocebus_atys
ENSNGAG00000020807	Srrm4	86	90.613	ENSCLAG00000009764	SRRM4	85	90.631	Chinchilla_lanigera
ENSNGAG00000020807	Srrm4	87	88.719	ENSCSAG00000002300	SRRM4	85	88.719	Chlorocebus_sabaeus
ENSNGAG00000020807	Srrm4	87	61.314	ENSCPBG00000012293	SRRM4	88	61.765	Chrysemys_picta_bellii
ENSNGAG00000020807	Srrm4	53	89.441	ENSCANG00000031719	SRRM4	85	82.409	Colobus_angolensis_palliatus
ENSNGAG00000020807	Srrm4	86	85.221	ENSCGRG00001000544	Srrm4	86	86.233	Cricetulus_griseus_chok1gshd
ENSNGAG00000020807	Srrm4	87	80.306	ENSCGRG00000006973	Srrm4	85	81.836	Cricetulus_griseus_crigri
ENSNGAG00000020807	Srrm4	86	86.564	ENSDNOG00000000260	SRRM4	88	86.616	Dasypus_novemcinctus
ENSNGAG00000020807	Srrm4	87	77.672	ENSDORG00000015243	Srrm4	87	79.350	Dipodomys_ordii
ENSNGAG00000020807	Srrm4	86	88.654	ENSEASG00005008759	SRRM4	87	88.719	Equus_asinus_asinus
ENSNGAG00000020807	Srrm4	86	88.654	ENSECAG00000021729	SRRM4	87	88.719	Equus_caballus
ENSNGAG00000020807	Srrm4	86	89.423	ENSFCAG00000010536	SRRM4	92	84.801	Felis_catus
ENSNGAG00000020807	Srrm4	86	85.934	ENSFDAG00000007218	SRRM4	85	87.786	Fukomys_damarensis
ENSNGAG00000020807	Srrm4	59	56.334	ENSGAGG00000017218	SRRM4	82	59.406	Gopherus_agassizii
ENSNGAG00000020807	Srrm4	87	89.293	ENSGGOG00000005338	SRRM4	85	89.293	Gorilla_gorilla
ENSNGAG00000020807	Srrm4	86	90.000	ENSHGLG00000007830	SRRM4	86	90.076	Heterocephalus_glaber_female
ENSNGAG00000020807	Srrm4	78	81.172	ENSHGLG00100008549	SRRM4	91	80.331	Heterocephalus_glaber_male
ENSNGAG00000020807	Srrm4	84	76.333	ENSSTOG00000026642	SRRM4	84	76.496	Ictidomys_tridecemlineatus
ENSNGAG00000020807	Srrm4	84	81.028	ENSJJAG00000016448	Srrm4	82	87.318	Jaculus_jaculus
ENSNGAG00000020807	Srrm4	86	85.549	ENSLAFG00000003731	SRRM4	85	85.086	Loxodonta_africana
ENSNGAG00000020807	Srrm4	87	88.910	ENSMFAG00000041271	SRRM4	84	88.910	Macaca_fascicularis
ENSNGAG00000020807	Srrm4	86	75.600	ENSMMUG00000021230	SRRM4	79	73.824	Macaca_mulatta
ENSNGAG00000020807	Srrm4	87	88.719	ENSMNEG00000044154	SRRM4	85	88.719	Macaca_nemestrina
ENSNGAG00000020807	Srrm4	87	88.910	ENSMLEG00000034455	SRRM4	85	88.910	Mandrillus_leucophaeus
ENSNGAG00000020807	Srrm4	86	59.662	ENSMGAG00000009082	SRRM4	87	61.710	Meleagris_gallopavo
ENSNGAG00000020807	Srrm4	86	84.069	ENSMAUG00000013203	Srrm4	86	85.086	Mesocricetus_auratus
ENSNGAG00000020807	Srrm4	87	88.337	ENSMICG00000012386	SRRM4	85	88.337	Microcebus_murinus
ENSNGAG00000020807	Srrm4	86	84.069	ENSMOCG00000006737	Srrm4	86	84.895	Microtus_ochrogaster
ENSNGAG00000020807	Srrm4	86	56.915	ENSMODG00000015283	SRRM4	92	56.219	Monodelphis_domestica
ENSNGAG00000020807	Srrm4	86	88.292	MGP_CAROLIEiJ_G0027638	Srrm4	85	86.807	Mus_caroli
ENSNGAG00000020807	Srrm4	86	87.692	ENSMUSG00000063919	Srrm4	85	86.233	Mus_musculus
ENSNGAG00000020807	Srrm4	86	86.372	MGP_PahariEiJ_G0024219	Srrm4	86	84.895	Mus_pahari
ENSNGAG00000020807	Srrm4	86	87.908	MGP_SPRETEiJ_G0028637	Srrm4	85	86.424	Mus_spretus
ENSNGAG00000020807	Srrm4	86	88.846	ENSMPUG00000002930	SRRM4	87	88.910	Mustela_putorius_furo
ENSNGAG00000020807	Srrm4	87	88.910	ENSNLEG00000000200	SRRM4	85	88.910	Nomascus_leucogenys
ENSNGAG00000020807	Srrm4	86	79.810	ENSOPRG00000016981	SRRM4	77	79.245	Ochotona_princeps
ENSNGAG00000020807	Srrm4	86	89.251	ENSODEG00000006291	SRRM4	85	89.293	Octodon_degus
ENSNGAG00000020807	Srrm4	86	85.164	ENSOCUG00000004503	SRRM4	77	85.305	Oryctolagus_cuniculus
ENSNGAG00000020807	Srrm4	87	88.528	ENSOGAG00000015431	SRRM4	85	88.528	Otolemur_garnettii
ENSNGAG00000020807	Srrm4	87	87.572	ENSOARG00000002063	SRRM4	87	87.572	Ovis_aries
ENSNGAG00000020807	Srrm4	79	88.309	ENSPPAG00000028134	SRRM4	84	88.309	Pan_paniscus
ENSNGAG00000020807	Srrm4	86	89.038	ENSPPRG00000002659	SRRM4	84	89.101	Panthera_pardus
ENSNGAG00000020807	Srrm4	87	89.293	ENSPTRG00000005517	SRRM4	85	89.293	Pan_troglodytes
ENSNGAG00000020807	Srrm4	87	88.337	ENSPANG00000022544	SRRM4	99	88.063	Papio_anubis
ENSNGAG00000020807	Srrm4	86	86.756	ENSPEMG00000001823	Srrm4	86	88.528	Peromyscus_maniculatus_bairdii
ENSNGAG00000020807	Srrm4	79	77.035	ENSPCAG00000016401	SRRM4	69	76.618	Procavia_capensis
ENSNGAG00000020807	Srrm4	87	89.293	ENSPCOG00000013803	SRRM4	87	89.293	Propithecus_coquereli
ENSNGAG00000020807	Srrm4	79	88.309	ENSPVAG00000017487	SRRM4	86	88.309	Pteropus_vampyrus
ENSNGAG00000020807	Srrm4	86	87.716	ENSRNOG00000001141	Srrm4	86	86.233	Rattus_norvegicus
ENSNGAG00000020807	Srrm4	53	87.578	ENSRBIG00000040107	SRRM4	56	87.578	Rhinopithecus_bieti
ENSNGAG00000020807	Srrm4	53	88.509	ENSRROG00000035868	SRRM4	56	88.509	Rhinopithecus_roxellana
ENSNGAG00000020807	Srrm4	87	83.174	ENSSBOG00000035310	SRRM4	85	83.174	Saimiri_boliviensis_boliviensis
ENSNGAG00000020807	Srrm4	79	65.805	ENSSHAG00000017330	SRRM4	88	64.471	Sarcophilus_harrisii
ENSNGAG00000020807	Srrm4	53	81.447	ENSSARG00000012647	SRRM4	84	68.476	Sorex_araneus
ENSNGAG00000020807	Srrm4	87	88.337	ENSSSCG00000009845	SRRM4	85	88.337	Sus_scrofa
ENSNGAG00000020807	Srrm4	64	57.436	ENSTGUG00000009228	SRRM4	91	57.435	Taeniopygia_guttata
ENSNGAG00000020807	Srrm4	72	84.314	ENSVPAG00000007937	SRRM4	72	87.786	Vicugna_pacos
ENSNGAG00000020807	Srrm4	53	46.154	ENSXETG00000019934	SRRM4	97	49.813	Xenopus_tropicalis