EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000020847 (Gene tree)
Gene ID: 103735463
Gene Symbol: Rpusd4
Alias: 2410001E19Rik
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 9087 bases
Position: chrKL198860.1:1473076-1482162
Accession: 103735463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000021757	PseudoU_synth_2	PF00849.22	2.4e-33	1	1
ENSNGAP00000021761	PseudoU_synth_2	PF00849.22	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000027438	-	1586	XM_008834723	ENSNGAP00000021757	377 (aa)	XP_008832945	UPI0004ED5075
ENSNGAT00000027442	-	1140	-	ENSNGAP00000021761	379 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000020847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000020847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000020847	Rpusd4	98	78.437	ENSG00000165526	RPUSD4	98	78.437	Homo_sapiens
ENSNGAG00000020847	Rpusd4	88	54.030	ENSAPOG00000011024	rpusd4	83	54.030	Acanthochromis_polyacanthus
ENSNGAG00000020847	Rpusd4	99	81.989	ENSAMEG00000000127	-	99	81.989	Ailuropoda_melanoleuca
ENSNGAG00000020847	Rpusd4	82	78.873	ENSAMEG00000005953	-	98	78.873	Ailuropoda_melanoleuca
ENSNGAG00000020847	Rpusd4	86	50.456	ENSACIG00000003533	rpusd4	96	50.456	Amphilophus_citrinellus
ENSNGAG00000020847	Rpusd4	90	52.601	ENSAOCG00000015409	rpusd4	85	52.601	Amphiprion_ocellaris
ENSNGAG00000020847	Rpusd4	90	53.198	ENSAPEG00000018935	rpusd4	85	53.198	Amphiprion_percula
ENSNGAG00000020847	Rpusd4	89	52.478	ENSATEG00000008059	rpusd4	84	52.478	Anabas_testudineus
ENSNGAG00000020847	Rpusd4	73	62.724	ENSAPLG00000013250	RPUSD4	99	61.356	Anas_platyrhynchos
ENSNGAG00000020847	Rpusd4	96	62.192	ENSACAG00000000189	RPUSD4	99	62.192	Anolis_carolinensis
ENSNGAG00000020847	Rpusd4	98	79.784	ENSANAG00000024050	RPUSD4	99	79.784	Aotus_nancymaae
ENSNGAG00000020847	Rpusd4	86	53.776	ENSACLG00000020996	rpusd4	84	53.776	Astatotilapia_calliptera
ENSNGAG00000020847	Rpusd4	92	49.162	ENSAMXG00000031479	rpusd4	95	50.742	Astyanax_mexicanus
ENSNGAG00000020847	Rpusd4	99	76.471	ENSBTAG00000020900	RPUSD4	99	76.471	Bos_taurus
ENSNGAG00000020847	Rpusd4	98	79.730	ENSCJAG00000042850	RPUSD4	93	79.730	Callithrix_jacchus
ENSNGAG00000020847	Rpusd4	99	81.233	ENSCAFG00000010488	RPUSD4	99	81.233	Canis_familiaris
ENSNGAG00000020847	Rpusd4	99	81.233	ENSCAFG00020010621	RPUSD4	99	81.233	Canis_lupus_dingo
ENSNGAG00000020847	Rpusd4	98	77.480	ENSCHIG00000009975	RPUSD4	98	77.480	Capra_hircus
ENSNGAG00000020847	Rpusd4	98	82.703	ENSTSYG00000008456	RPUSD4	98	82.703	Carlito_syrichta
ENSNGAG00000020847	Rpusd4	67	82.143	ENSCAPG00000006040	RPUSD4	98	82.143	Cavia_aperea
ENSNGAG00000020847	Rpusd4	98	81.351	ENSCPOG00000014971	RPUSD4	98	81.351	Cavia_porcellus
ENSNGAG00000020847	Rpusd4	98	80.054	ENSCCAG00000027838	RPUSD4	99	80.054	Cebus_capucinus
ENSNGAG00000020847	Rpusd4	98	78.976	ENSCATG00000041570	RPUSD4	98	78.976	Cercocebus_atys
ENSNGAG00000020847	Rpusd4	98	81.649	ENSCLAG00000016553	RPUSD4	98	81.649	Chinchilla_lanigera
ENSNGAG00000020847	Rpusd4	98	79.515	ENSCSAG00000002274	RPUSD4	98	79.515	Chlorocebus_sabaeus
ENSNGAG00000020847	Rpusd4	74	83.813	ENSCHOG00000010249	RPUSD4	98	83.813	Choloepus_hoffmanni
ENSNGAG00000020847	Rpusd4	75	69.825	ENSCPBG00000011175	RPUSD4	98	69.825	Chrysemys_picta_bellii
ENSNGAG00000020847	Rpusd4	71	43.885	ENSCSAVG00000000872	-	54	43.885	Ciona_savignyi
ENSNGAG00000020847	Rpusd4	98	78.437	ENSCANG00000039684	RPUSD4	98	78.437	Colobus_angolensis_palliatus
ENSNGAG00000020847	Rpusd4	99	84.450	ENSCGRG00001024141	Rpusd4	99	84.450	Cricetulus_griseus_chok1gshd
ENSNGAG00000020847	Rpusd4	99	84.450	ENSCGRG00000014415	Rpusd4	99	84.450	Cricetulus_griseus_crigri
ENSNGAG00000020847	Rpusd4	90	51.744	ENSCVAG00000000392	rpusd4	95	51.775	Cyprinodon_variegatus
ENSNGAG00000020847	Rpusd4	90	51.453	ENSCVAG00000008761	rpusd4	86	51.453	Cyprinodon_variegatus
ENSNGAG00000020847	Rpusd4	85	50.769	ENSDARG00000012674	rpusd4	91	50.769	Danio_rerio
ENSNGAG00000020847	Rpusd4	99	77.957	ENSDNOG00000020026	RPUSD4	99	77.957	Dasypus_novemcinctus
ENSNGAG00000020847	Rpusd4	99	81.501	ENSDORG00000016717	Rpusd4	99	81.501	Dipodomys_ordii
ENSNGAG00000020847	Rpusd4	100	77.573	ENSETEG00000013953	RPUSD4	100	77.573	Echinops_telfairi
ENSNGAG00000020847	Rpusd4	99	82.527	ENSEASG00005022982	RPUSD4	99	82.527	Equus_asinus_asinus
ENSNGAG00000020847	Rpusd4	99	82.258	ENSECAG00000000557	RPUSD4	99	82.258	Equus_caballus
ENSNGAG00000020847	Rpusd4	80	83.696	ENSEEUG00000014036	RPUSD4	80	83.696	Erinaceus_europaeus
ENSNGAG00000020847	Rpusd4	88	57.391	ENSELUG00000008075	rpusd4	90	57.391	Esox_lucius
ENSNGAG00000020847	Rpusd4	99	80.914	ENSFCAG00000029789	RPUSD4	99	80.914	Felis_catus
ENSNGAG00000020847	Rpusd4	88	59.337	ENSFALG00000005171	RPUSD4	98	59.337	Ficedula_albicollis
ENSNGAG00000020847	Rpusd4	98	81.989	ENSFDAG00000014307	RPUSD4	98	81.989	Fukomys_damarensis
ENSNGAG00000020847	Rpusd4	90	49.721	ENSFHEG00000004329	rpusd4	92	49.721	Fundulus_heteroclitus
ENSNGAG00000020847	Rpusd4	85	51.070	ENSGMOG00000017726	rpusd4	96	51.070	Gadus_morhua
ENSNGAG00000020847	Rpusd4	87	58.631	ENSGALG00000024326	RPUSD4	95	59.118	Gallus_gallus
ENSNGAG00000020847	Rpusd4	89	48.991	ENSGAFG00000021559	rpusd4	87	48.991	Gambusia_affinis
ENSNGAG00000020847	Rpusd4	89	50.294	ENSGACG00000001657	rpusd4	100	50.588	Gasterosteus_aculeatus
ENSNGAG00000020847	Rpusd4	92	63.112	ENSGAGG00000000132	RPUSD4	96	63.112	Gopherus_agassizii
ENSNGAG00000020847	Rpusd4	98	78.706	ENSGGOG00000016494	RPUSD4	98	78.706	Gorilla_gorilla
ENSNGAG00000020847	Rpusd4	86	53.776	ENSHBUG00000022838	rpusd4	84	53.776	Haplochromis_burtoni
ENSNGAG00000020847	Rpusd4	98	82.210	ENSHGLG00000002285	RPUSD4	98	82.210	Heterocephalus_glaber_female
ENSNGAG00000020847	Rpusd4	98	82.210	ENSHGLG00100006385	RPUSD4	98	82.210	Heterocephalus_glaber_male
ENSNGAG00000020847	Rpusd4	86	54.573	ENSHCOG00000006612	rpusd4	83	54.573	Hippocampus_comes
ENSNGAG00000020847	Rpusd4	94	52.247	ENSIPUG00000023879	rusd4	91	52.247	Ictalurus_punctatus
ENSNGAG00000020847	Rpusd4	97	82.143	ENSSTOG00000025280	RPUSD4	100	82.143	Ictidomys_tridecemlineatus
ENSNGAG00000020847	Rpusd4	99	85.484	ENSJJAG00000018673	Rpusd4	100	85.484	Jaculus_jaculus
ENSNGAG00000020847	Rpusd4	87	55.389	ENSKMAG00000021805	rpusd4	86	55.389	Kryptolebias_marmoratus
ENSNGAG00000020847	Rpusd4	86	54.878	ENSLBEG00000020394	rpusd4	91	54.878	Labrus_bergylta
ENSNGAG00000020847	Rpusd4	85	63.692	ENSLACG00000011028	RPUSD4	85	62.426	Latimeria_chalumnae
ENSNGAG00000020847	Rpusd4	86	49.240	ENSLOCG00000003124	rpusd4	88	49.240	Lepisosteus_oculatus
ENSNGAG00000020847	Rpusd4	99	79.032	ENSLAFG00000005211	RPUSD4	99	79.032	Loxodonta_africana
ENSNGAG00000020847	Rpusd4	98	78.976	ENSMFAG00000039513	RPUSD4	98	78.976	Macaca_fascicularis
ENSNGAG00000020847	Rpusd4	99	78.400	ENSMMUG00000007933	RPUSD4	99	78.400	Macaca_mulatta
ENSNGAG00000020847	Rpusd4	98	78.706	ENSMNEG00000027414	RPUSD4	98	78.706	Macaca_nemestrina
ENSNGAG00000020847	Rpusd4	98	78.706	ENSMLEG00000042461	RPUSD4	98	78.706	Mandrillus_leucophaeus
ENSNGAG00000020847	Rpusd4	88	50.296	ENSMAMG00000023839	rpusd4	86	50.296	Mastacembelus_armatus
ENSNGAG00000020847	Rpusd4	86	53.776	ENSMZEG00005011999	rpusd4	84	53.776	Maylandia_zebra
ENSNGAG00000020847	Rpusd4	74	63.214	ENSMGAG00000000840	RPUSD4	99	60.185	Meleagris_gallopavo
ENSNGAG00000020847	Rpusd4	99	82.979	ENSMAUG00000010280	Rpusd4	99	82.979	Mesocricetus_auratus
ENSNGAG00000020847	Rpusd4	98	81.671	ENSMICG00000015979	RPUSD4	93	87.338	Microcebus_murinus
ENSNGAG00000020847	Rpusd4	98	81.132	ENSMOCG00000000661	Rpusd4	98	81.132	Microtus_ochrogaster
ENSNGAG00000020847	Rpusd4	78	56.187	ENSMMOG00000021731	rpusd4	88	56.187	Mola_mola
ENSNGAG00000020847	Rpusd4	87	75.841	ENSMODG00000004521	RPUSD4	84	75.841	Monodelphis_domestica
ENSNGAG00000020847	Rpusd4	80	54.221	ENSMALG00000005839	rpusd4	98	52.778	Monopterus_albus
ENSNGAG00000020847	Rpusd4	99	82.713	MGP_CAROLIEiJ_G0031954	Rpusd4	99	82.713	Mus_caroli
ENSNGAG00000020847	Rpusd4	99	82.447	ENSMUSG00000032044	Rpusd4	99	82.447	Mus_musculus
ENSNGAG00000020847	Rpusd4	99	83.511	MGP_PahariEiJ_G0014819	Rpusd4	99	83.511	Mus_pahari
ENSNGAG00000020847	Rpusd4	99	82.713	MGP_SPRETEiJ_G0033078	Rpusd4	99	82.713	Mus_spretus
ENSNGAG00000020847	Rpusd4	99	79.625	ENSMPUG00000006608	RPUSD4	99	79.625	Mustela_putorius_furo
ENSNGAG00000020847	Rpusd4	89	83.976	ENSMLUG00000017328	-	96	79.452	Myotis_lucifugus
ENSNGAG00000020847	Rpusd4	67	84.252	ENSMLUG00000029348	-	100	84.252	Myotis_lucifugus
ENSNGAG00000020847	Rpusd4	86	54.407	ENSNBRG00000005207	rpusd4	95	54.407	Neolamprologus_brichardi
ENSNGAG00000020847	Rpusd4	98	78.976	ENSNLEG00000007465	RPUSD4	98	78.976	Nomascus_leucogenys
ENSNGAG00000020847	Rpusd4	90	75.367	ENSMEUG00000004370	RPUSD4	92	75.367	Notamacropus_eugenii
ENSNGAG00000020847	Rpusd4	55	82.877	ENSOPRG00000013141	-	78	82.877	Ochotona_princeps
ENSNGAG00000020847	Rpusd4	98	81.233	ENSODEG00000004577	RPUSD4	98	81.233	Octodon_degus
ENSNGAG00000020847	Rpusd4	94	51.944	ENSONIG00000018879	rpusd4	96	51.944	Oreochromis_niloticus
ENSNGAG00000020847	Rpusd4	77	69.831	ENSOANG00000007247	RPUSD4	95	69.697	Ornithorhynchus_anatinus
ENSNGAG00000020847	Rpusd4	98	80.645	ENSOCUG00000017039	RPUSD4	98	80.645	Oryctolagus_cuniculus
ENSNGAG00000020847	Rpusd4	90	51.156	ENSORLG00000002750	rpusd4	94	49.858	Oryzias_latipes
ENSNGAG00000020847	Rpusd4	93	49.859	ENSORLG00020002044	rpusd4	86	49.859	Oryzias_latipes_hni
ENSNGAG00000020847	Rpusd4	93	50.000	ENSORLG00015020034	rpusd4	86	50.000	Oryzias_latipes_hsok
ENSNGAG00000020847	Rpusd4	89	52.199	ENSOMEG00000004861	rpusd4	84	52.035	Oryzias_melastigma
ENSNGAG00000020847	Rpusd4	98	81.183	ENSOGAG00000008922	RPUSD4	98	81.183	Otolemur_garnettii
ENSNGAG00000020847	Rpusd4	96	78.297	ENSOARG00000012238	RPUSD4	98	77.628	Ovis_aries
ENSNGAG00000020847	Rpusd4	98	78.706	ENSPPAG00000042883	RPUSD4	92	78.706	Pan_paniscus
ENSNGAG00000020847	Rpusd4	99	80.697	ENSPPRG00000003081	RPUSD4	99	80.697	Panthera_pardus
ENSNGAG00000020847	Rpusd4	99	80.697	ENSPTIG00000012059	RPUSD4	99	80.697	Panthera_tigris_altaica
ENSNGAG00000020847	Rpusd4	98	78.437	ENSPTRG00000004454	RPUSD4	98	78.437	Pan_troglodytes
ENSNGAG00000020847	Rpusd4	98	79.515	ENSPANG00000015040	RPUSD4	98	79.515	Papio_anubis
ENSNGAG00000020847	Rpusd4	89	57.692	ENSPKIG00000023986	rpusd4	86	57.692	Paramormyrops_kingsleyae
ENSNGAG00000020847	Rpusd4	79	68.000	ENSPSIG00000014268	RPUSD4	95	68.000	Pelodiscus_sinensis
ENSNGAG00000020847	Rpusd4	86	51.672	ENSPMGG00000002806	rpusd4	91	51.524	Periophthalmus_magnuspinnatus
ENSNGAG00000020847	Rpusd4	99	76.408	ENSPEMG00000000278	Rpusd4	99	76.408	Peromyscus_maniculatus_bairdii
ENSNGAG00000020847	Rpusd4	81	45.562	ENSPMAG00000008183	rpusd4	98	45.562	Petromyzon_marinus
ENSNGAG00000020847	Rpusd4	95	73.003	ENSPCIG00000010212	RPUSD4	99	73.003	Phascolarctos_cinereus
ENSNGAG00000020847	Rpusd4	89	51.009	ENSPFOG00000019030	rpusd4	90	51.009	Poecilia_formosa
ENSNGAG00000020847	Rpusd4	89	51.594	ENSPLAG00000016848	rpusd4	87	51.594	Poecilia_latipinna
ENSNGAG00000020847	Rpusd4	89	50.725	ENSPMEG00000017534	rpusd4	87	50.725	Poecilia_mexicana
ENSNGAG00000020847	Rpusd4	85	51.506	ENSPREG00000005689	rpusd4	85	51.506	Poecilia_reticulata
ENSNGAG00000020847	Rpusd4	98	79.245	ENSPPYG00000004043	RPUSD4	98	79.245	Pongo_abelii
ENSNGAG00000020847	Rpusd4	80	77.717	ENSPCAG00000000753	RPUSD4	81	77.717	Procavia_capensis
ENSNGAG00000020847	Rpusd4	98	74.124	ENSPCOG00000020694	RPUSD4	100	74.124	Propithecus_coquereli
ENSNGAG00000020847	Rpusd4	97	80.495	ENSPVAG00000000988	RPUSD4	96	80.495	Pteropus_vampyrus
ENSNGAG00000020847	Rpusd4	86	52.568	ENSPNYG00000009652	rpusd4	84	52.568	Pundamilia_nyererei
ENSNGAG00000020847	Rpusd4	88	52.994	ENSPNAG00000012264	rpusd4	88	52.994	Pygocentrus_nattereri
ENSNGAG00000020847	Rpusd4	99	83.245	ENSRNOG00000011567	Rpusd4	99	83.245	Rattus_norvegicus
ENSNGAG00000020847	Rpusd4	96	79.778	ENSRBIG00000034842	RPUSD4	98	78.976	Rhinopithecus_bieti
ENSNGAG00000020847	Rpusd4	96	79.778	ENSRROG00000039753	RPUSD4	98	78.976	Rhinopithecus_roxellana
ENSNGAG00000020847	Rpusd4	98	79.784	ENSSBOG00000030413	RPUSD4	99	79.784	Saimiri_boliviensis_boliviensis
ENSNGAG00000020847	Rpusd4	80	77.076	ENSSHAG00000008304	RPUSD4	99	77.076	Sarcophilus_harrisii
ENSNGAG00000020847	Rpusd4	86	57.831	ENSSFOG00015006203	rpusd4	99	53.083	Scleropages_formosus
ENSNGAG00000020847	Rpusd4	96	51.475	ENSSMAG00000020978	rpusd4	96	51.475	Scophthalmus_maximus
ENSNGAG00000020847	Rpusd4	85	52.599	ENSSDUG00000013399	rpusd4	85	52.599	Seriola_dumerili
ENSNGAG00000020847	Rpusd4	85	52.294	ENSSLDG00000023507	rpusd4	85	52.294	Seriola_lalandi_dorsalis
ENSNGAG00000020847	Rpusd4	91	63.584	ENSSPUG00000001401	RPUSD4	96	64.000	Sphenodon_punctatus
ENSNGAG00000020847	Rpusd4	90	53.314	ENSSPAG00000012163	rpusd4	89	53.314	Stegastes_partitus
ENSNGAG00000020847	Rpusd4	99	80.645	ENSSSCG00000015233	RPUSD4	99	80.645	Sus_scrofa
ENSNGAG00000020847	Rpusd4	79	62.333	ENSTGUG00000000773	RPUSD4	100	62.333	Taeniopygia_guttata
ENSNGAG00000020847	Rpusd4	86	53.172	ENSTRUG00000012283	rpusd4	84	53.172	Takifugu_rubripes
ENSNGAG00000020847	Rpusd4	93	50.420	ENSTNIG00000014676	rpusd4	90	50.420	Tetraodon_nigroviridis
ENSNGAG00000020847	Rpusd4	99	80.914	ENSTTRG00000001555	RPUSD4	99	80.914	Tursiops_truncatus
ENSNGAG00000020847	Rpusd4	99	80.914	ENSUMAG00000002219	RPUSD4	99	80.914	Ursus_maritimus
ENSNGAG00000020847	Rpusd4	70	81.509	ENSVPAG00000001066	RPUSD4	100	81.509	Vicugna_pacos
ENSNGAG00000020847	Rpusd4	99	81.501	ENSVVUG00000020101	RPUSD4	99	81.501	Vulpes_vulpes
ENSNGAG00000020847	Rpusd4	89	50.435	ENSXCOG00000004676	rpusd4	89	50.145	Xiphophorus_couchianus
ENSNGAG00000020847	Rpusd4	89	50.435	ENSXMAG00000023351	rpusd4	87	50.435	Xiphophorus_maculatus