EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000020856 (Gene tree)
Gene ID: 103725700
Gene Symbol: -
Alias: 1200003F12Rik|PNPase|polynucleotide phosphorylase
Full Name: polyribonucleotide nucleotidyltransferase 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 41356 bases
Position: chrKL205289.1:1477760-1519115
Accession: 103725700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000021801	KH_1	PF00013.29	8.8e-06	1	1
ENSNGAP00000021791	KH_1	PF00013.29	9.2e-06	1	1
ENSNGAP00000021791	RNase_PH	PF01138.21	1.3e-40	1	2
ENSNGAP00000021791	RNase_PH	PF01138.21	1.3e-40	2	2
ENSNGAP00000021801	RNase_PH	PF01138.21	1.2e-36	1	2
ENSNGAP00000021801	RNase_PH	PF01138.21	1.2e-36	2	2
ENSNGAP00000021791	PNPase	PF03726.14	2.2e-08	1	1
ENSNGAP00000021801	PNPase	PF03726.14	2.2e-08	1	1
ENSNGAP00000021791	S1	PF00575.23	4.7e-06	1	1
ENSNGAP00000021801	S1	PF00575.23	1.1e-05	1	1
ENSNGAP00000021791	RNase_PH_C	PF03725.15	3.7e-16	1	1
ENSNGAP00000021801	RNase_PH_C	PF03725.15	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000027482	-	2367	-	ENSNGAP00000021801	788 (aa)	-	-
ENSNGAT00000027472	-	2634	XM_008822998	ENSNGAP00000021791	783 (aa)	XP_008821220	UPI0004ED3076

Gene Model

Click here to download ENSNGAG00000020856's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000020856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000020856	-	99	93.223	ENSG00000138035	PNPT1	99	93.661	Homo_sapiens
ENSNGAG00000020856	-	93	78.434	ENSAPOG00000005581	PNPT1	98	76.902	Acanthochromis_polyacanthus
ENSNGAG00000020856	-	99	92.377	ENSAMEG00000003772	PNPT1	99	92.377	Ailuropoda_melanoleuca
ENSNGAG00000020856	-	92	77.379	ENSACIG00000010140	PNPT1	98	78.151	Amphilophus_citrinellus
ENSNGAG00000020856	-	97	76.532	ENSAOCG00000020109	PNPT1	98	77.381	Amphiprion_ocellaris
ENSNGAG00000020856	-	95	75.978	ENSAPEG00000002299	PNPT1	98	76.849	Amphiprion_percula
ENSNGAG00000020856	-	94	78.883	ENSATEG00000011164	PNPT1	95	78.962	Anabas_testudineus
ENSNGAG00000020856	-	93	81.769	ENSAPLG00000002885	PNPT1	99	82.069	Anas_platyrhynchos
ENSNGAG00000020856	-	99	78.815	ENSACAG00000003692	PNPT1	98	79.540	Anolis_carolinensis
ENSNGAG00000020856	-	99	93.032	ENSANAG00000023709	PNPT1	99	93.273	Aotus_nancymaae
ENSNGAG00000020856	-	97	76.723	ENSACLG00000024267	PNPT1	98	77.441	Astatotilapia_calliptera
ENSNGAG00000020856	-	92	77.018	ENSAMXG00000042321	PNPT1	99	77.562	Astyanax_mexicanus
ENSNGAG00000020856	-	99	91.462	ENSBTAG00000008909	PNPT1	99	91.462	Bos_taurus
ENSNGAG00000020856	-	91	41.575	WBGene00015266	BE0003N10.1	96	41.575	Caenorhabditis_elegans
ENSNGAG00000020856	-	99	93.419	ENSCJAG00000009740	PNPT1	99	93.532	Callithrix_jacchus
ENSNGAG00000020856	-	99	86.923	ENSCAFG00000002891	PNPT1	99	86.923	Canis_familiaris
ENSNGAG00000020856	-	99	92.497	ENSCAFG00020026841	PNPT1	99	92.497	Canis_lupus_dingo
ENSNGAG00000020856	-	99	88.098	ENSCHIG00000025034	PNPT1	99	88.098	Capra_hircus
ENSNGAG00000020856	-	99	91.871	ENSTSYG00000006536	PNPT1	99	92.109	Carlito_syrichta
ENSNGAG00000020856	-	91	72.361	ENSCAPG00000013300	PNPT1	98	72.361	Cavia_aperea
ENSNGAG00000020856	-	99	90.944	ENSCPOG00000011008	PNPT1	99	90.944	Cavia_porcellus
ENSNGAG00000020856	-	99	92.516	ENSCCAG00000037909	PNPT1	99	92.755	Cebus_capucinus
ENSNGAG00000020856	-	99	69.290	ENSCATG00000036442	-	98	69.261	Cercocebus_atys
ENSNGAG00000020856	-	99	91.560	ENSCATG00000031551	PNPT1	99	91.979	Cercocebus_atys
ENSNGAG00000020856	-	99	91.484	ENSCLAG00000006240	PNPT1	99	91.721	Chinchilla_lanigera
ENSNGAG00000020856	-	99	92.976	ENSCSAG00000014324	PNPT1	99	93.411	Chlorocebus_sabaeus
ENSNGAG00000020856	-	92	81.502	ENSCHOG00000007360	PNPT1	98	81.502	Choloepus_hoffmanni
ENSNGAG00000020856	-	99	79.523	ENSCPBG00000020856	PNPT1	99	80.025	Chrysemys_picta_bellii
ENSNGAG00000020856	-	99	71.669	ENSCANG00000028159	-	98	72.084	Colobus_angolensis_palliatus
ENSNGAG00000020856	-	99	92.711	ENSCANG00000034019	PNPT1	99	93.144	Colobus_angolensis_palliatus
ENSNGAG00000020856	-	99	92.958	ENSCGRG00001012245	Pnpt1	99	93.196	Cricetulus_griseus_chok1gshd
ENSNGAG00000020856	-	99	93.548	ENSCGRG00000007624	Pnpt1	99	93.790	Cricetulus_griseus_crigri
ENSNGAG00000020856	-	91	74.614	ENSCSEG00000000809	PNPT1	99	74.684	Cynoglossus_semilaevis
ENSNGAG00000020856	-	78	77.003	ENSCVAG00000010037	PNPT1	96	78.986	Cyprinodon_variegatus
ENSNGAG00000020856	-	99	90.452	ENSDNOG00000046753	PNPT1	99	90.686	Dasypus_novemcinctus
ENSNGAG00000020856	-	99	92.497	ENSDORG00000011409	Pnpt1	98	92.497	Dipodomys_ordii
ENSNGAG00000020856	-	98	56.047	FBgn0039846	PNPase	99	56.047	Drosophila_melanogaster
ENSNGAG00000020856	-	99	67.313	ENSETEG00000001582	-	99	67.313	Echinops_telfairi
ENSNGAG00000020856	-	92	54.230	ENSEBUG00000010305	PNPT1	94	54.230	Eptatretus_burgeri
ENSNGAG00000020856	-	99	93.661	ENSEASG00005001974	PNPT1	99	93.661	Equus_asinus_asinus
ENSNGAG00000020856	-	99	93.790	ENSECAG00000020058	PNPT1	97	93.790	Equus_caballus
ENSNGAG00000020856	-	99	82.474	ENSEEUG00000015610	PNPT1	99	82.474	Erinaceus_europaeus
ENSNGAG00000020856	-	96	77.067	ENSELUG00000004795	PNPT1	96	77.943	Esox_lucius
ENSNGAG00000020856	-	99	93.014	ENSFCAG00000013236	PNPT1	99	93.014	Felis_catus
ENSNGAG00000020856	-	93	80.743	ENSFALG00000011214	PNPT1	98	81.311	Ficedula_albicollis
ENSNGAG00000020856	-	99	91.049	ENSFDAG00000017446	PNPT1	99	91.462	Fukomys_damarensis
ENSNGAG00000020856	-	97	75.817	ENSFHEG00000006495	PNPT1	98	78.611	Fundulus_heteroclitus
ENSNGAG00000020856	-	95	74.263	ENSGMOG00000006805	PNPT1	96	74.831	Gadus_morhua
ENSNGAG00000020856	-	94	80.868	ENSGALG00000043545	PNPT1	91	81.431	Gallus_gallus
ENSNGAG00000020856	-	97	75.817	ENSGAFG00000019681	PNPT1	98	77.424	Gambusia_affinis
ENSNGAG00000020856	-	96	75.726	ENSGACG00000010840	PNPT1	98	75.726	Gasterosteus_aculeatus
ENSNGAG00000020856	-	99	77.806	ENSGGOG00000041496	-	98	78.329	Gorilla_gorilla
ENSNGAG00000020856	-	99	93.223	ENSGGOG00000006867	PNPT1	99	93.661	Gorilla_gorilla
ENSNGAG00000020856	-	97	76.463	ENSHBUG00000013041	PNPT1	98	77.177	Haplochromis_burtoni
ENSNGAG00000020856	-	99	91.850	ENSHGLG00000007480	PNPT1	99	91.850	Heterocephalus_glaber_female
ENSNGAG00000020856	-	89	83.524	ENSHGLG00000010054	-	95	83.524	Heterocephalus_glaber_female
ENSNGAG00000020856	-	99	91.850	ENSHGLG00100010920	PNPT1	99	91.850	Heterocephalus_glaber_male
ENSNGAG00000020856	-	99	78.137	ENSHGLG00100007397	-	98	78.137	Heterocephalus_glaber_male
ENSNGAG00000020856	-	93	63.302	ENSHCOG00000002817	PNPT1	98	63.862	Hippocampus_comes
ENSNGAG00000020856	-	93	77.702	ENSIPUG00000014624	PNPT1	99	78.225	Ictalurus_punctatus
ENSNGAG00000020856	-	100	92.209	ENSSTOG00000006304	PNPT1	99	92.755	Ictidomys_tridecemlineatus
ENSNGAG00000020856	-	99	92.497	ENSJJAG00000019227	Pnpt1	99	92.497	Jaculus_jaculus
ENSNGAG00000020856	-	94	77.297	ENSKMAG00000017389	PNPT1	95	78.326	Kryptolebias_marmoratus
ENSNGAG00000020856	-	95	77.493	ENSLBEG00000027692	PNPT1	97	76.944	Labrus_bergylta
ENSNGAG00000020856	-	90	79.747	ENSLACG00000011059	PNPT1	99	81.214	Latimeria_chalumnae
ENSNGAG00000020856	-	99	73.995	ENSLOCG00000015375	PNPT1	99	74.427	Lepisosteus_oculatus
ENSNGAG00000020856	-	99	84.794	ENSLAFG00000021462	PNPT1	99	84.794	Loxodonta_africana
ENSNGAG00000020856	-	99	92.839	ENSMFAG00000001927	PNPT1	99	93.273	Macaca_fascicularis
ENSNGAG00000020856	-	86	94.258	ENSMMUG00000007003	PNPT1	98	94.258	Macaca_mulatta
ENSNGAG00000020856	-	94	93.234	ENSMNEG00000038589	PNPT1	99	94.576	Macaca_nemestrina
ENSNGAG00000020856	-	99	89.770	ENSMLEG00000038706	PNPT1	99	90.168	Mandrillus_leucophaeus
ENSNGAG00000020856	-	99	67.564	ENSMLEG00000028524	-	98	67.834	Mandrillus_leucophaeus
ENSNGAG00000020856	-	99	70.202	ENSMAMG00000021954	PNPT1	99	70.588	Mastacembelus_armatus
ENSNGAG00000020856	-	97	76.723	ENSMZEG00005027363	PNPT1	98	77.441	Maylandia_zebra
ENSNGAG00000020856	-	93	80.874	ENSMGAG00000001952	PNPT1	98	81.440	Meleagris_gallopavo
ENSNGAG00000020856	-	100	92.649	ENSMAUG00000013652	Pnpt1	99	93.196	Mesocricetus_auratus
ENSNGAG00000020856	-	100	93.231	ENSMICG00000009369	PNPT1	99	93.790	Microcebus_murinus
ENSNGAG00000020856	-	99	93.943	ENSMOCG00000002820	Pnpt1	99	93.943	Microtus_ochrogaster
ENSNGAG00000020856	-	91	74.309	ENSMMOG00000007480	PNPT1	98	74.825	Mola_mola
ENSNGAG00000020856	-	99	82.798	ENSMODG00000001984	PNPT1	99	83.012	Monodelphis_domestica
ENSNGAG00000020856	-	95	77.658	ENSMALG00000018484	PNPT1	98	76.578	Monopterus_albus
ENSNGAG00000020856	-	98	93.742	MGP_CAROLIEiJ_G0016153	Pnpt1	99	94.179	Mus_caroli
ENSNGAG00000020856	-	98	93.603	ENSMUSG00000020464	Pnpt1	99	93.532	Mus_musculus
ENSNGAG00000020856	-	99	93.661	MGP_PahariEiJ_G0016737	Pnpt1	99	93.661	Mus_pahari
ENSNGAG00000020856	-	100	93.103	MGP_SPRETEiJ_G0016996	Pnpt1	99	94.587	Mus_spretus
ENSNGAG00000020856	-	99	92.774	ENSMPUG00000002353	PNPT1	99	92.774	Mustela_putorius_furo
ENSNGAG00000020856	-	99	91.753	ENSMLUG00000003886	PNPT1	99	91.753	Myotis_lucifugus
ENSNGAG00000020856	-	70	75.226	ENSNBRG00000012517	PNPT1	87	76.059	Neolamprologus_brichardi
ENSNGAG00000020856	-	99	90.281	ENSNLEG00000009354	PNPT1	99	90.686	Nomascus_leucogenys
ENSNGAG00000020856	-	92	81.324	ENSNLEG00000003327	-	98	81.865	Nomascus_leucogenys
ENSNGAG00000020856	-	99	89.642	ENSOPRG00000010232	-	99	89.780	Ochotona_princeps
ENSNGAG00000020856	-	99	91.355	ENSODEG00000012137	PNPT1	99	91.591	Octodon_degus
ENSNGAG00000020856	-	99	75.159	ENSONIG00000000983	PNPT1	98	75.840	Oreochromis_niloticus
ENSNGAG00000020856	-	90	86.629	ENSOANG00000011178	PNPT1	98	87.302	Ornithorhynchus_anatinus
ENSNGAG00000020856	-	99	93.935	ENSOCUG00000006889	PNPT1	99	93.935	Oryctolagus_cuniculus
ENSNGAG00000020856	-	99	74.839	ENSORLG00000004335	PNPT1	96	75.359	Oryzias_latipes
ENSNGAG00000020856	-	99	74.615	ENSORLG00015018951	PNPT1	99	78.691	Oryzias_latipes_hsok
ENSNGAG00000020856	-	99	90.736	ENSOGAG00000009840	PNPT1	99	91.271	Otolemur_garnettii
ENSNGAG00000020856	-	99	91.731	ENSOARG00000002164	PNPT1	99	91.731	Ovis_aries
ENSNGAG00000020856	-	90	93.196	ENSPPAG00000024705	PNPT1	99	93.740	Pan_paniscus
ENSNGAG00000020856	-	99	75.223	ENSPPAG00000040514	-	98	75.679	Pan_paniscus
ENSNGAG00000020856	-	99	93.273	ENSPPRG00000001366	PNPT1	99	93.273	Panthera_pardus
ENSNGAG00000020856	-	99	93.402	ENSPTIG00000014915	PNPT1	99	93.402	Panthera_tigris_altaica
ENSNGAG00000020856	-	99	75.032	ENSPTRG00000051411	-	98	75.491	Pan_troglodytes
ENSNGAG00000020856	-	99	93.223	ENSPTRG00000011934	PNPT1	99	93.661	Pan_troglodytes
ENSNGAG00000020856	-	99	93.223	ENSPANG00000022846	PNPT1	99	93.661	Papio_anubis
ENSNGAG00000020856	-	99	73.585	ENSPKIG00000021612	PNPT1	99	75.243	Paramormyrops_kingsleyae
ENSNGAG00000020856	-	98	80.415	ENSPSIG00000013120	PNPT1	98	80.946	Pelodiscus_sinensis
ENSNGAG00000020856	-	99	94.140	ENSPEMG00000004284	Pnpt1	99	94.459	Peromyscus_maniculatus_bairdii
ENSNGAG00000020856	-	92	73.416	ENSPMAG00000008932	PNPT1	98	73.416	Petromyzon_marinus
ENSNGAG00000020856	-	99	84.319	ENSPCIG00000010236	PNPT1	99	84.496	Phascolarctos_cinereus
ENSNGAG00000020856	-	97	76.340	ENSPFOG00000010229	PNPT1	98	76.923	Poecilia_formosa
ENSNGAG00000020856	-	97	76.471	ENSPLAG00000009008	PNPT1	98	77.056	Poecilia_latipinna
ENSNGAG00000020856	-	97	76.340	ENSPMEG00000004192	PNPT1	98	78.644	Poecilia_mexicana
ENSNGAG00000020856	-	93	77.473	ENSPREG00000003072	PNPT1	98	78.243	Poecilia_reticulata
ENSNGAG00000020856	-	99	92.711	ENSPPYG00000012399	PNPT1	99	93.144	Pongo_abelii
ENSNGAG00000020856	-	92	81.641	ENSPCAG00000010806	PNPT1	98	81.641	Procavia_capensis
ENSNGAG00000020856	-	92	81.215	ENSPCOG00000015664	PNPT1	99	81.653	Propithecus_coquereli
ENSNGAG00000020856	-	80	87.617	ENSPVAG00000005379	PNPT1	88	78.514	Pteropus_vampyrus
ENSNGAG00000020856	-	93	76.406	ENSPNYG00000000363	PNPT1	95	77.083	Pundamilia_nyererei
ENSNGAG00000020856	-	95	79.840	ENSPNAG00000010891	PNPT1	96	80.514	Pygocentrus_nattereri
ENSNGAG00000020856	-	97	93.404	ENSRNOG00000003600	Pnpt1	99	93.273	Rattus_norvegicus
ENSNGAG00000020856	-	99	92.839	ENSRBIG00000043016	PNPT1	99	93.273	Rhinopithecus_bieti
ENSNGAG00000020856	-	99	92.711	ENSRROG00000040537	PNPT1	99	93.144	Rhinopithecus_roxellana
ENSNGAG00000020856	-	99	90.452	ENSSBOG00000032574	PNPT1	98	94.517	Saimiri_boliviensis_boliviensis
ENSNGAG00000020856	-	62	86.448	ENSSHAG00000014040	PNPT1	98	86.749	Sarcophilus_harrisii
ENSNGAG00000020856	-	93	69.918	ENSSFOG00015017596	PNPT1	94	70.654	Scleropages_formosus
ENSNGAG00000020856	-	95	75.908	ENSSMAG00000018471	PNPT1	98	75.972	Scophthalmus_maximus
ENSNGAG00000020856	-	95	78.197	ENSSDUG00000018584	PNPT1	95	78.610	Seriola_dumerili
ENSNGAG00000020856	-	95	78.600	ENSSLDG00000023385	PNPT1	98	77.542	Seriola_lalandi_dorsalis
ENSNGAG00000020856	-	86	84.286	ENSSARG00000012819	PNPT1	86	84.568	Sorex_araneus
ENSNGAG00000020856	-	99	77.551	ENSSPUG00000011785	PNPT1	99	77.806	Sphenodon_punctatus
ENSNGAG00000020856	-	95	75.705	ENSSPAG00000016880	PNPT1	98	75.312	Stegastes_partitus
ENSNGAG00000020856	-	99	92.367	ENSSSCG00000031882	PNPT1	99	92.367	Sus_scrofa
ENSNGAG00000020856	-	93	80.933	ENSTGUG00000006908	PNPT1	98	81.363	Taeniopygia_guttata
ENSNGAG00000020856	-	93	76.648	ENSTRUG00000005495	PNPT1	95	76.431	Takifugu_rubripes
ENSNGAG00000020856	-	93	76.712	ENSTNIG00000007460	PNPT1	99	76.495	Tetraodon_nigroviridis
ENSNGAG00000020856	-	99	63.355	ENSTBEG00000010788	PNPT1	99	63.355	Tupaia_belangeri
ENSNGAG00000020856	-	93	93.141	ENSTTRG00000000029	PNPT1	98	93.602	Tursiops_truncatus
ENSNGAG00000020856	-	92	94.609	ENSUAMG00000017133	PNPT1	99	93.732	Ursus_americanus
ENSNGAG00000020856	-	99	92.885	ENSUMAG00000018844	PNPT1	97	92.885	Ursus_maritimus
ENSNGAG00000020856	-	99	83.592	ENSVPAG00000007097	PNPT1	99	83.592	Vicugna_pacos
ENSNGAG00000020856	-	99	92.238	ENSVVUG00000010034	PNPT1	99	92.238	Vulpes_vulpes
ENSNGAG00000020856	-	98	78.329	ENSXETG00000006075	pnpt1	96	78.968	Xenopus_tropicalis
ENSNGAG00000020856	-	92	78.670	ENSXCOG00000013381	PNPT1	97	78.750	Xiphophorus_couchianus
ENSNGAG00000020856	-	96	76.587	ENSXMAG00000016907	PNPT1	98	78.750	Xiphophorus_maculatus