EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000021073 (Gene tree)
Gene ID: 103729342
Gene Symbol: Rrp1b
Alias: 2600005C20Rik
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 24625 bases
Position: chrKL199477.1:1824337-1848961
Accession: 103729342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000022082	Nop52	PF05997.12	1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000027765	-	2205	XM_008827382	ENSNGAP00000022082	734 (aa)	XP_008825604	-

Gene Model

Click here to download ENSNGAG00000021073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000021073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000021073	Rrp1b	100	66.579	ENSG00000160208	RRP1B	100	66.579	Homo_sapiens
ENSNGAG00000021073	Rrp1b	68	44.444	ENSAPOG00000007490	-	53	46.067	Acanthochromis_polyacanthus
ENSNGAG00000021073	Rrp1b	55	45.278	ENSAMEG00000011448	RRP1	72	50.298	Ailuropoda_melanoleuca
ENSNGAG00000021073	Rrp1b	56	54.054	ENSAOCG00000017894	-	87	56.122	Amphiprion_ocellaris
ENSNGAG00000021073	Rrp1b	62	47.619	ENSAPEG00000024150	-	50	46.358	Amphiprion_percula
ENSNGAG00000021073	Rrp1b	94	43.087	ENSAPLG00000004310	RRP1B	100	43.356	Anas_platyrhynchos
ENSNGAG00000021073	Rrp1b	100	64.737	ENSANAG00000034889	RRP1B	100	64.737	Aotus_nancymaae
ENSNGAG00000021073	Rrp1b	51	46.702	ENSBTAG00000003981	RRP1	83	46.966	Bos_taurus
ENSNGAG00000021073	Rrp1b	100	59.025	ENSBTAG00000017418	RRP1B	100	58.762	Bos_taurus
ENSNGAG00000021073	Rrp1b	100	63.241	ENSCJAG00000017077	RRP1B	100	63.241	Callithrix_jacchus
ENSNGAG00000021073	Rrp1b	94	59.664	ENSCAFG00000010621	RRP1B	99	59.187	Canis_familiaris
ENSNGAG00000021073	Rrp1b	100	60.771	ENSCAFG00020018901	RRP1B	100	60.320	Canis_lupus_dingo
ENSNGAG00000021073	Rrp1b	51	44.638	ENSCHIG00000020948	RRP1	81	47.312	Capra_hircus
ENSNGAG00000021073	Rrp1b	100	59.367	ENSCHIG00000021519	RRP1B	100	58.453	Capra_hircus
ENSNGAG00000021073	Rrp1b	100	59.680	ENSCPOG00000002396	RRP1B	100	58.995	Cavia_porcellus
ENSNGAG00000021073	Rrp1b	52	48.148	ENSCCAG00000029828	RRP1	80	49.086	Cebus_capucinus
ENSNGAG00000021073	Rrp1b	100	65.658	ENSCCAG00000029384	RRP1B	100	65.658	Cebus_capucinus
ENSNGAG00000021073	Rrp1b	100	66.447	ENSCATG00000017423	RRP1B	100	66.447	Cercocebus_atys
ENSNGAG00000021073	Rrp1b	100	59.439	ENSCLAG00000005622	RRP1B	100	60.204	Chinchilla_lanigera
ENSNGAG00000021073	Rrp1b	100	66.053	ENSCSAG00000007961	RRP1B	100	66.053	Chlorocebus_sabaeus
ENSNGAG00000021073	Rrp1b	50	56.104	ENSCHOG00000002426	-	63	56.104	Choloepus_hoffmanni
ENSNGAG00000021073	Rrp1b	99	47.066	ENSCPBG00000010310	RRP1B	98	46.016	Chrysemys_picta_bellii
ENSNGAG00000021073	Rrp1b	100	66.053	ENSCANG00000040952	RRP1B	100	66.053	Colobus_angolensis_palliatus
ENSNGAG00000021073	Rrp1b	100	70.878	ENSCGRG00001010889	-	100	71.809	Cricetulus_griseus_chok1gshd
ENSNGAG00000021073	Rrp1b	100	70.612	ENSCGRG00001023882	-	100	71.543	Cricetulus_griseus_chok1gshd
ENSNGAG00000021073	Rrp1b	96	69.263	ENSCGRG00000001553	Rrp1b	97	70.845	Cricetulus_griseus_crigri
ENSNGAG00000021073	Rrp1b	57	53.846	ENSCSEG00000020711	-	73	53.846	Cynoglossus_semilaevis
ENSNGAG00000021073	Rrp1b	100	57.984	ENSDNOG00000032774	RRP1B	100	57.728	Dasypus_novemcinctus
ENSNGAG00000021073	Rrp1b	52	48.259	ENSDNOG00000019880	RRP1	88	46.489	Dasypus_novemcinctus
ENSNGAG00000021073	Rrp1b	93	60.485	ENSDORG00000005496	Rrp1b	100	61.769	Dipodomys_ordii
ENSNGAG00000021073	Rrp1b	100	51.921	ENSETEG00000019489	RRP1B	100	51.575	Echinops_telfairi
ENSNGAG00000021073	Rrp1b	52	45.980	ENSEASG00005001673	RRP1	83	46.335	Equus_asinus_asinus
ENSNGAG00000021073	Rrp1b	100	62.714	ENSEASG00005001687	RRP1B	100	62.714	Equus_asinus_asinus
ENSNGAG00000021073	Rrp1b	52	44.010	ENSECAG00000015703	RRP1	83	46.475	Equus_caballus
ENSNGAG00000021073	Rrp1b	100	63.421	ENSECAG00000018018	RRP1B	100	62.714	Equus_caballus
ENSNGAG00000021073	Rrp1b	63	54.400	ENSELUG00000015885	-	97	42.623	Esox_lucius
ENSNGAG00000021073	Rrp1b	100	59.737	ENSFCAG00000010272	RRP1B	100	60.132	Felis_catus
ENSNGAG00000021073	Rrp1b	52	47.680	ENSFCAG00000008434	RRP1	84	47.938	Felis_catus
ENSNGAG00000021073	Rrp1b	96	58.799	ENSFDAG00000010899	RRP1B	96	59.078	Fukomys_damarensis
ENSNGAG00000021073	Rrp1b	53	44.059	ENSFDAG00000013728	RRP1	83	44.935	Fukomys_damarensis
ENSNGAG00000021073	Rrp1b	52	52.688	ENSFHEG00000016314	-	52	46.154	Fundulus_heteroclitus
ENSNGAG00000021073	Rrp1b	62	50.000	ENSGMOG00000001953	-	69	50.450	Gadus_morhua
ENSNGAG00000021073	Rrp1b	50	52.850	ENSGALG00000035696	RRP1B	50	53.109	Gallus_gallus
ENSNGAG00000021073	Rrp1b	99	33.422	ENSGACG00000001438	rrp1	71	47.857	Gasterosteus_aculeatus
ENSNGAG00000021073	Rrp1b	99	45.085	ENSGAGG00000000375	RRP1B	99	45.982	Gopherus_agassizii
ENSNGAG00000021073	Rrp1b	100	66.447	ENSGGOG00000012069	RRP1B	100	66.447	Gorilla_gorilla
ENSNGAG00000021073	Rrp1b	99	60.509	ENSHGLG00000004968	RRP1B	100	60.776	Heterocephalus_glaber_female
ENSNGAG00000021073	Rrp1b	82	64.706	ENSHGLG00100002232	RRP1B	81	64.265	Heterocephalus_glaber_male
ENSNGAG00000021073	Rrp1b	69	46.753	ENSHCOG00000018388	-	65	46.358	Hippocampus_comes
ENSNGAG00000021073	Rrp1b	64	43.478	ENSIPUG00000000673	-	73	40.106	Ictalurus_punctatus
ENSNGAG00000021073	Rrp1b	99	65.768	ENSSTOG00000011790	RRP1B	96	66.400	Ictidomys_tridecemlineatus
ENSNGAG00000021073	Rrp1b	53	45.885	ENSSTOG00000011116	RRP1	74	49.849	Ictidomys_tridecemlineatus
ENSNGAG00000021073	Rrp1b	100	63.515	ENSJJAG00000021279	Rrp1b	100	63.915	Jaculus_jaculus
ENSNGAG00000021073	Rrp1b	63	49.650	ENSKMAG00000005539	rrp1	70	49.650	Kryptolebias_marmoratus
ENSNGAG00000021073	Rrp1b	99	36.364	ENSLACG00000017332	-	52	46.547	Latimeria_chalumnae
ENSNGAG00000021073	Rrp1b	51	46.547	ENSLAFG00000022901	RRP1	87	46.547	Loxodonta_africana
ENSNGAG00000021073	Rrp1b	88	57.485	ENSLAFG00000000766	RRP1B	99	57.485	Loxodonta_africana
ENSNGAG00000021073	Rrp1b	100	66.579	ENSMFAG00000039152	RRP1B	100	66.316	Macaca_fascicularis
ENSNGAG00000021073	Rrp1b	100	64.737	ENSMMUG00000000104	RRP1B	100	64.474	Macaca_mulatta
ENSNGAG00000021073	Rrp1b	100	66.316	ENSMNEG00000034269	RRP1B	100	66.053	Macaca_nemestrina
ENSNGAG00000021073	Rrp1b	94	66.109	ENSMLEG00000040044	RRP1B	99	66.109	Mandrillus_leucophaeus
ENSNGAG00000021073	Rrp1b	50	53.109	ENSMGAG00000014591	RRP1B	100	41.282	Meleagris_gallopavo
ENSNGAG00000021073	Rrp1b	100	70.850	ENSMAUG00000021508	Rrp1b	100	71.159	Mesocricetus_auratus
ENSNGAG00000021073	Rrp1b	100	67.065	ENSMICG00000004686	RRP1B	100	66.534	Microcebus_murinus
ENSNGAG00000021073	Rrp1b	100	68.145	ENSMOCG00000001117	Rrp1b	100	68.548	Microtus_ochrogaster
ENSNGAG00000021073	Rrp1b	100	55.556	ENSMODG00000021033	RRP1B	100	56.078	Monodelphis_domestica
ENSNGAG00000021073	Rrp1b	100	67.112	MGP_CAROLIEiJ_G0021376	Rrp1b	100	67.246	Mus_caroli
ENSNGAG00000021073	Rrp1b	100	67.785	ENSMUSG00000058392	Rrp1b	100	67.608	Mus_musculus
ENSNGAG00000021073	Rrp1b	100	65.957	MGP_PahariEiJ_G0023695	Rrp1b	100	66.755	Mus_pahari
ENSNGAG00000021073	Rrp1b	100	65.957	MGP_SPRETEiJ_G0022290	Rrp1b	100	66.533	Mus_spretus
ENSNGAG00000021073	Rrp1b	83	54.646	ENSMPUG00000009810	RRP1B	99	53.834	Mustela_putorius_furo
ENSNGAG00000021073	Rrp1b	99	62.202	ENSMLUG00000007738	RRP1B	99	61.538	Myotis_lucifugus
ENSNGAG00000021073	Rrp1b	59	44.545	ENSNLEG00000034734	RRP1	79	47.872	Nomascus_leucogenys
ENSNGAG00000021073	Rrp1b	100	64.815	ENSNLEG00000001490	RRP1B	100	64.815	Nomascus_leucogenys
ENSNGAG00000021073	Rrp1b	66	78.992	ENSMEUG00000003226	-	78	78.992	Notamacropus_eugenii
ENSNGAG00000021073	Rrp1b	100	58.616	ENSODEG00000013177	RRP1B	100	58.480	Octodon_degus
ENSNGAG00000021073	Rrp1b	99	47.471	ENSOANG00000006470	RRP1B	99	47.650	Ornithorhynchus_anatinus
ENSNGAG00000021073	Rrp1b	94	55.237	ENSOCUG00000025931	RRP1B	100	53.945	Oryctolagus_cuniculus
ENSNGAG00000021073	Rrp1b	57	54.321	ENSORLG00020007199	-	51	53.086	Oryzias_latipes_hni
ENSNGAG00000021073	Rrp1b	65	43.768	ENSORLG00015004425	-	55	43.228	Oryzias_latipes_hsok
ENSNGAG00000021073	Rrp1b	57	56.790	ENSOMEG00000016910	-	53	56.790	Oryzias_melastigma
ENSNGAG00000021073	Rrp1b	71	77.686	ENSOGAG00000009872	RRP1B	88	77.686	Otolemur_garnettii
ENSNGAG00000021073	Rrp1b	94	57.682	ENSOARG00000011314	RRP1B	100	56.727	Ovis_aries
ENSNGAG00000021073	Rrp1b	97	64.391	ENSPPAG00000035319	RRP1B	99	65.877	Pan_paniscus
ENSNGAG00000021073	Rrp1b	100	59.055	ENSPPRG00000010356	RRP1B	100	59.445	Panthera_pardus
ENSNGAG00000021073	Rrp1b	67	71.654	ENSPTIG00000016894	RRP1B	86	71.654	Panthera_tigris_altaica
ENSNGAG00000021073	Rrp1b	100	66.579	ENSPTRG00000013958	RRP1B	100	66.579	Pan_troglodytes
ENSNGAG00000021073	Rrp1b	100	66.711	ENSPANG00000011090	RRP1B	100	66.711	Papio_anubis
ENSNGAG00000021073	Rrp1b	52	47.525	ENSPANG00000015097	RRP1	71	51.335	Papio_anubis
ENSNGAG00000021073	Rrp1b	99	46.424	ENSPSIG00000008152	RRP1B	96	46.272	Pelodiscus_sinensis
ENSNGAG00000021073	Rrp1b	100	68.842	ENSPEMG00000022490	Rrp1b	100	69.907	Peromyscus_maniculatus_bairdii
ENSNGAG00000021073	Rrp1b	100	55.932	ENSPCIG00000015513	RRP1B	100	55.484	Phascolarctos_cinereus
ENSNGAG00000021073	Rrp1b	55	48.946	ENSPCIG00000015523	-	81	52.381	Phascolarctos_cinereus
ENSNGAG00000021073	Rrp1b	64	46.667	ENSPMEG00000007042	-	58	46.667	Poecilia_mexicana
ENSNGAG00000021073	Rrp1b	64	47.297	ENSPREG00000015673	-	58	47.297	Poecilia_reticulata
ENSNGAG00000021073	Rrp1b	100	66.842	ENSPPYG00000011470	RRP1B	100	66.842	Pongo_abelii
ENSNGAG00000021073	Rrp1b	85	84.211	ENSPCAG00000013723	RRP1B	91	84.211	Procavia_capensis
ENSNGAG00000021073	Rrp1b	100	67.729	ENSPCOG00000017927	RRP1B	100	68.393	Propithecus_coquereli
ENSNGAG00000021073	Rrp1b	99	55.878	ENSPVAG00000001436	RRP1B	99	55.020	Pteropus_vampyrus
ENSNGAG00000021073	Rrp1b	80	42.623	ENSPNAG00000007718	-	53	43.889	Pygocentrus_nattereri
ENSNGAG00000021073	Rrp1b	100	67.333	ENSRNOG00000001194	Rrp1b	100	68.000	Rattus_norvegicus
ENSNGAG00000021073	Rrp1b	100	63.026	ENSRBIG00000041689	RRP1B	100	63.026	Rhinopithecus_bieti
ENSNGAG00000021073	Rrp1b	100	66.447	ENSRROG00000031499	RRP1B	100	66.447	Rhinopithecus_roxellana
ENSNGAG00000021073	Rrp1b	94	62.500	ENSSBOG00000034727	RRP1B	99	62.500	Saimiri_boliviensis_boliviensis
ENSNGAG00000021073	Rrp1b	100	56.005	ENSSHAG00000017789	RRP1B	100	55.685	Sarcophilus_harrisii
ENSNGAG00000021073	Rrp1b	70	45.000	ENSSFOG00015003932	-	59	45.000	Scleropages_formosus
ENSNGAG00000021073	Rrp1b	62	51.515	ENSSMAG00000016847	-	83	43.642	Scophthalmus_maximus
ENSNGAG00000021073	Rrp1b	62	52.713	ENSSDUG00000000551	-	55	47.368	Seriola_dumerili
ENSNGAG00000021073	Rrp1b	62	52.713	ENSSLDG00000002538	-	53	49.664	Seriola_lalandi_dorsalis
ENSNGAG00000021073	Rrp1b	79	60.071	ENSSARG00000003108	-	75	60.071	Sorex_araneus
ENSNGAG00000021073	Rrp1b	50	50.259	ENSSPUG00000002834	RRP1B	99	42.288	Sphenodon_punctatus
ENSNGAG00000021073	Rrp1b	100	58.112	ENSSSCG00000021698	RRP1B	100	57.616	Sus_scrofa
ENSNGAG00000021073	Rrp1b	60	45.192	ENSTNIG00000005053	rrp1	70	45.192	Tetraodon_nigroviridis
ENSNGAG00000021073	Rrp1b	86	64.048	ENSTBEG00000000422	RRP1B	99	74.556	Tupaia_belangeri
ENSNGAG00000021073	Rrp1b	100	57.769	ENSTTRG00000000723	RRP1B	100	58.300	Tursiops_truncatus
ENSNGAG00000021073	Rrp1b	100	58.988	ENSUAMG00000026765	RRP1B	100	58.322	Ursus_americanus
ENSNGAG00000021073	Rrp1b	51	44.648	ENSUMAG00000025507	RRP1	80	45.370	Ursus_maritimus
ENSNGAG00000021073	Rrp1b	63	71.429	ENSUMAG00000025510	RRP1B	96	71.429	Ursus_maritimus
ENSNGAG00000021073	Rrp1b	94	59.860	ENSVVUG00000024509	RRP1B	99	59.244	Vulpes_vulpes
ENSNGAG00000021073	Rrp1b	63	43.614	ENSXETG00000013683	rrp1b	67	46.281	Xenopus_tropicalis
ENSNGAG00000021073	Rrp1b	64	45.752	ENSXMAG00000023123	-	59	45.752	Xiphophorus_maculatus