EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNGAG00000021852 (Gene tree)
Gene ID
103734566
Gene Symbol
Smarca4
Alias
Brg1|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Nannospalax_galili
Status
putative
Strand
Plus strand
Length
95627 bases
Position
chrKL200918.1:90451-186077
Accession
103734566
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNGAP00000023246ResIIIPF04851.151.6e-0911
ENSNGAP00000023249ResIIIPF04851.151.6e-0911
ENSNGAP00000023246BRKPF07533.161.3e-1711
ENSNGAP00000023249BRKPF07533.161.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNGAT00000028939-5434XM_008833554ENSNGAP000000232461610 (aa)XP_008831776UPI0004ED4B44
ENSNGAT00000028943-4932XM_008833551ENSNGAP000000232491643 (aa)XP_008831773UPI0004ED5E15
Gene Model
Click here to download ENSNGAG00000021852's gene model file
Pathways
Pathway IDPathway NameSource
ngi04714ThermogenesisKEGG
ngi05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000021852's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNGAG00000021852Smarca49875.109ENSNGAG00000000108Smarca28280.410
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNGAG00000021852Smarca410098.699ENSG00000127616SMARCA410099.531Homo_sapiens
ENSNGAG00000021852Smarca47588.183ENSAPOG00000003509smarca4a9886.229Acanthochromis_polyacanthus
ENSNGAG00000021852Smarca49583.468ENSAPOG00000004542SMARCA49882.909Acanthochromis_polyacanthus
ENSNGAG00000021852Smarca410094.762ENSAMEG00000010868SMARCA410094.762Ailuropoda_melanoleuca
ENSNGAG00000021852Smarca49787.461ENSACIG00000021550smarca4a9887.384Amphilophus_citrinellus
ENSNGAG00000021852Smarca48985.922ENSAOCG00000019167smarca4a10086.634Amphiprion_ocellaris
ENSNGAG00000021852Smarca49486.495ENSAOCG00000009450-9786.891Amphiprion_ocellaris
ENSNGAG00000021852Smarca48985.992ENSAPEG00000015559smarca4a10086.704Amphiprion_percula
ENSNGAG00000021852Smarca410082.938ENSAPEG00000023108-9982.329Amphiprion_percula
ENSNGAG00000021852Smarca410087.172ENSATEG00000011524smarca4a10087.607Anabas_testudineus
ENSNGAG00000021852Smarca49983.587ENSATEG00000001094-9981.697Anabas_testudineus
ENSNGAG00000021852Smarca49998.385ENSANAG00000036991SMARCA410096.724Aotus_nancymaae
ENSNGAG00000021852Smarca49788.557ENSACLG00000000163smarca4a9888.213Astatotilapia_calliptera
ENSNGAG00000021852Smarca49583.814ENSACLG00000008638-9883.521Astatotilapia_calliptera
ENSNGAG00000021852Smarca49487.215ENSAMXG00000011238-9886.792Astyanax_mexicanus
ENSNGAG00000021852Smarca49783.144ENSAMXG00000021023smarca4a8489.026Astyanax_mexicanus
ENSNGAG00000021852Smarca410098.323ENSBTAG00000019220SMARCA410098.323Bos_taurus
ENSNGAG00000021852Smarca410096.665ENSCJAG00000005936SMARCA410096.665Callithrix_jacchus
ENSNGAG00000021852Smarca410098.699ENSCAFG00000017584SMARCA410098.699Canis_familiaris
ENSNGAG00000021852Smarca410098.699ENSCAFG00020024620SMARCA49998.699Canis_lupus_dingo
ENSNGAG00000021852Smarca410093.862ENSCHIG00000015318SMARCA410093.862Capra_hircus
ENSNGAG00000021852Smarca410098.261ENSTSYG00000012966SMARCA410098.261Carlito_syrichta
ENSNGAG00000021852Smarca49488.933ENSCAPG00000015932SMARCA49297.485Cavia_aperea
ENSNGAG00000021852Smarca410098.327ENSCPOG00000015549SMARCA410098.327Cavia_porcellus
ENSNGAG00000021852Smarca410094.455ENSCCAG00000031660SMARCA49994.763Cebus_capucinus
ENSNGAG00000021852Smarca410098.699ENSCATG00000029530SMARCA410098.699Cercocebus_atys
ENSNGAG00000021852Smarca410098.199ENSCLAG00000011946SMARCA410098.199Chinchilla_lanigera
ENSNGAG00000021852Smarca410096.161ENSCPBG00000009994SMARCA410096.223Chrysemys_picta_bellii
ENSNGAG00000021852Smarca410098.575ENSCANG00000036013SMARCA410098.575Colobus_angolensis_palliatus
ENSNGAG00000021852Smarca410098.575ENSCGRG00001016732Smarca410098.575Cricetulus_griseus_chok1gshd
ENSNGAG00000021852Smarca410098.575ENSCGRG00000017242Smarca410098.575Cricetulus_griseus_crigri
ENSNGAG00000021852Smarca49686.890ENSCSEG00000014771smarca4a10086.927Cynoglossus_semilaevis
ENSNGAG00000021852Smarca49984.085ENSCVAG00000003018-9884.398Cyprinodon_variegatus
ENSNGAG00000021852Smarca49786.855ENSCVAG00000006979smarca4a9986.787Cyprinodon_variegatus
ENSNGAG00000021852Smarca49284.165ENSDARG00000104339SMARCA49584.488Danio_rerio
ENSNGAG00000021852Smarca410086.951ENSDARG00000077226smarca4a10087.439Danio_rerio
ENSNGAG00000021852Smarca410089.510ENSDNOG00000048847SMARCA49398.732Dasypus_novemcinctus
ENSNGAG00000021852Smarca48590.711ENSDORG00000002544Smarca49191.894Dipodomys_ordii
ENSNGAG00000021852Smarca49488.457ENSETEG00000013361SMARCA49488.457Echinops_telfairi
ENSNGAG00000021852Smarca410098.265ENSEASG00005006167SMARCA49898.265Equus_asinus_asinus
ENSNGAG00000021852Smarca410098.327ENSECAG00000008334SMARCA410098.327Equus_caballus
ENSNGAG00000021852Smarca49977.701ENSELUG00000023232-9878.125Esox_lucius
ENSNGAG00000021852Smarca410086.303ENSELUG00000010247smarca4a10084.727Esox_lucius
ENSNGAG00000021852Smarca410098.664ENSFCAG00000004894SMARCA410098.664Felis_catus
ENSNGAG00000021852Smarca47497.817ENSFALG00000004208SMARCA49391.962Ficedula_albicollis
ENSNGAG00000021852Smarca49298.376ENSFDAG00000012237SMARCA49798.376Fukomys_damarensis
ENSNGAG00000021852Smarca410084.189ENSFHEG00000007902-9884.398Fundulus_heteroclitus
ENSNGAG00000021852Smarca49685.858ENSFHEG00000010182smarca4a10085.931Fundulus_heteroclitus
ENSNGAG00000021852Smarca49380.875ENSGMOG00000005756-8580.119Gadus_morhua
ENSNGAG00000021852Smarca49381.040ENSGMOG00000002649smarca4a8881.647Gadus_morhua
ENSNGAG00000021852Smarca47396.695ENSGALG00000047145SMARCA410096.695Gallus_gallus
ENSNGAG00000021852Smarca49088.491ENSGAFG00000014900smarca4a9988.052Gambusia_affinis
ENSNGAG00000021852Smarca49981.767ENSGAFG00000008827-9881.516Gambusia_affinis
ENSNGAG00000021852Smarca49885.509ENSGACG00000006691smarca4a10084.784Gasterosteus_aculeatus
ENSNGAG00000021852Smarca49980.918ENSGACG00000016033-9980.435Gasterosteus_aculeatus
ENSNGAG00000021852Smarca410096.340ENSGAGG00000016757SMARCA410096.402Gopherus_agassizii
ENSNGAG00000021852Smarca410098.699ENSGGOG00000009882SMARCA410098.699Gorilla_gorilla
ENSNGAG00000021852Smarca410083.733ENSHBUG00000005447-9983.553Haplochromis_burtoni
ENSNGAG00000021852Smarca410087.477ENSHBUG00000021172smarca4a10087.599Haplochromis_burtoni
ENSNGAG00000021852Smarca410098.179ENSHGLG00000010519SMARCA410098.179Heterocephalus_glaber_female
ENSNGAG00000021852Smarca410097.092ENSHGLG00100013774SMARCA410097.092Heterocephalus_glaber_male
ENSNGAG00000021852Smarca49586.577ENSHCOG00000009510smarca4a9686.906Hippocampus_comes
ENSNGAG00000021852Smarca410087.675ENSIPUG00000006107smarca4a10087.797Ictalurus_punctatus
ENSNGAG00000021852Smarca49884.843ENSIPUG00000016346-9884.422Ictalurus_punctatus
ENSNGAG00000021852Smarca410098.637ENSSTOG00000007939SMARCA410098.637Ictidomys_tridecemlineatus
ENSNGAG00000021852Smarca410098.543ENSJJAG00000012877Smarca410098.543Jaculus_jaculus
ENSNGAG00000021852Smarca410085.907ENSKMAG00000011931smarca4a10086.091Kryptolebias_marmoratus
ENSNGAG00000021852Smarca410083.581ENSKMAG00000019518-9887.378Kryptolebias_marmoratus
ENSNGAG00000021852Smarca49585.612ENSLBEG00000017383smarca4a9784.854Labrus_bergylta
ENSNGAG00000021852Smarca49583.151ENSLBEG00000020655-8282.995Labrus_bergylta
ENSNGAG00000021852Smarca45288.729ENSLACG00000015309SMARCA410088.341Latimeria_chalumnae
ENSNGAG00000021852Smarca410087.616ENSLOCG00000007820smarca4a9985.133Lepisosteus_oculatus
ENSNGAG00000021852Smarca410098.454ENSLAFG00000001433SMARCA410098.454Loxodonta_africana
ENSNGAG00000021852Smarca410098.699ENSMFAG00000032146SMARCA49998.699Macaca_fascicularis
ENSNGAG00000021852Smarca410098.699ENSMMUG00000012042SMARCA410098.699Macaca_mulatta
ENSNGAG00000021852Smarca410098.759ENSMNEG00000028512SMARCA410098.759Macaca_nemestrina
ENSNGAG00000021852Smarca410098.699ENSMLEG00000034976SMARCA410098.516Mandrillus_leucophaeus
ENSNGAG00000021852Smarca410087.248ENSMAMG00000009256smarca4a10087.370Mastacembelus_armatus
ENSNGAG00000021852Smarca49586.580ENSMAMG00000002841-9887.093Mastacembelus_armatus
ENSNGAG00000021852Smarca410087.485ENSMZEG00005003889smarca4a10087.363Maylandia_zebra
ENSNGAG00000021852Smarca49485.884ENSMZEG00005023861-9884.227Maylandia_zebra
ENSNGAG00000021852Smarca410098.392ENSMAUG00000020731Smarca410098.392Mesocricetus_auratus
ENSNGAG00000021852Smarca410098.392ENSMICG00000009806SMARCA410098.392Microcebus_murinus
ENSNGAG00000021852Smarca410098.454ENSMOCG00000022209Smarca410098.454Microtus_ochrogaster
ENSNGAG00000021852Smarca49585.219ENSMMOG00000007571smarca4a9885.687Mola_mola
ENSNGAG00000021852Smarca410097.571ENSMODG00000006287SMARCA410097.571Monodelphis_domestica
ENSNGAG00000021852Smarca49687.199ENSMALG00000003388smarca4a10086.919Monopterus_albus
ENSNGAG00000021852Smarca410098.699MGP_CAROLIEiJ_G0031879Smarca410098.736Mus_caroli
ENSNGAG00000021852Smarca410098.699ENSMUSG00000032187Smarca410098.699Mus_musculus
ENSNGAG00000021852Smarca410098.820MGP_PahariEiJ_G0014745Smarca410098.891Mus_pahari
ENSNGAG00000021852Smarca410098.699MGP_SPRETEiJ_G0033003Smarca410098.736Mus_spretus
ENSNGAG00000021852Smarca410098.699ENSMPUG00000005711SMARCA410098.699Mustela_putorius_furo
ENSNGAG00000021852Smarca410098.699ENSMLUG00000004491-10098.699Myotis_lucifugus
ENSNGAG00000021852Smarca49586.441ENSNBRG00000011457smarca4a9686.589Neolamprologus_brichardi
ENSNGAG00000021852Smarca410092.508ENSNLEG00000012389SMARCA410090.833Nomascus_leucogenys
ENSNGAG00000021852Smarca48196.552ENSOPRG00000000885-7896.552Ochotona_princeps
ENSNGAG00000021852Smarca410095.144ENSODEG00000017127SMARCA410094.644Octodon_degus
ENSNGAG00000021852Smarca410088.297ENSONIG00000008196smarca4a10088.497Oreochromis_niloticus
ENSNGAG00000021852Smarca410083.794ENSONIG00000018040-10083.613Oreochromis_niloticus
ENSNGAG00000021852Smarca49990.574ENSOCUG00000001787SMARCA49990.574Oryctolagus_cuniculus
ENSNGAG00000021852Smarca49583.386ENSORLG00000003955-9983.293Oryzias_latipes
ENSNGAG00000021852Smarca49686.113ENSORLG00000015452smarca4a10085.994Oryzias_latipes
ENSNGAG00000021852Smarca410085.872ENSORLG00020004611smarca4a10085.994Oryzias_latipes_hni
ENSNGAG00000021852Smarca49583.396ENSORLG00020009728-9983.184Oryzias_latipes_hni
ENSNGAG00000021852Smarca410085.872ENSORLG00015016560smarca4a10086.116Oryzias_latipes_hsok
ENSNGAG00000021852Smarca49983.152ENSORLG00015007739-9982.874Oryzias_latipes_hsok
ENSNGAG00000021852Smarca49683.282ENSOMEG00000016626-9983.153Oryzias_melastigma
ENSNGAG00000021852Smarca410086.650ENSOMEG00000007486smarca4a10087.271Oryzias_melastigma
ENSNGAG00000021852Smarca48996.330ENSOGAG00000016148SMARCA410096.330Otolemur_garnettii
ENSNGAG00000021852Smarca410097.269ENSOARG00000017454SMARCA410097.269Ovis_aries
ENSNGAG00000021852Smarca410098.699ENSPPAG00000043191SMARCA410098.699Pan_paniscus
ENSNGAG00000021852Smarca410098.664ENSPPRG00000000064SMARCA410098.664Panthera_pardus
ENSNGAG00000021852Smarca410098.699ENSPTRG00000010488SMARCA410098.699Pan_troglodytes
ENSNGAG00000021852Smarca410098.821ENSPANG00000011042SMARCA49998.821Papio_anubis
ENSNGAG00000021852Smarca49886.181ENSPKIG00000010087-9886.926Paramormyrops_kingsleyae
ENSNGAG00000021852Smarca410087.705ENSPKIG00000007770SMARCA410086.991Paramormyrops_kingsleyae
ENSNGAG00000021852Smarca410091.135ENSPSIG00000005547SMARCA410090.832Pelodiscus_sinensis
ENSNGAG00000021852Smarca410098.578ENSPEMG00000020389Smarca410098.578Peromyscus_maniculatus_bairdii
ENSNGAG00000021852Smarca410097.770ENSPCIG00000017138SMARCA410097.770Phascolarctos_cinereus
ENSNGAG00000021852Smarca410083.463ENSPFOG00000012930-9983.642Poecilia_formosa
ENSNGAG00000021852Smarca410085.662ENSPFOG00000007892smarca4a10085.949Poecilia_formosa
ENSNGAG00000021852Smarca410085.723ENSPLAG00000014294smarca4a10086.010Poecilia_latipinna
ENSNGAG00000021852Smarca48289.925ENSPLAG00000018616-9886.170Poecilia_latipinna
ENSNGAG00000021852Smarca49585.870ENSPMEG00000003725smarca4a9786.748Poecilia_mexicana
ENSNGAG00000021852Smarca49584.956ENSPMEG00000008929-9884.534Poecilia_mexicana
ENSNGAG00000021852Smarca49584.412ENSPREG00000014823-9784.432Poecilia_reticulata
ENSNGAG00000021852Smarca49785.532ENSPREG00000014608smarca4a10085.766Poecilia_reticulata
ENSNGAG00000021852Smarca410098.604ENSPPYG00000009568SMARCA410098.604Pongo_abelii
ENSNGAG00000021852Smarca47999.338ENSPCAG00000014054SMARCA47799.338Procavia_capensis
ENSNGAG00000021852Smarca410098.451ENSPCOG00000023011SMARCA410098.268Propithecus_coquereli
ENSNGAG00000021852Smarca49696.045ENSPVAG00000007787SMARCA49696.045Pteropus_vampyrus
ENSNGAG00000021852Smarca49786.488ENSPNYG00000000717smarca4a9687.982Pundamilia_nyererei
ENSNGAG00000021852Smarca49586.808ENSPNAG00000006636-9786.624Pygocentrus_nattereri
ENSNGAG00000021852Smarca410098.637ENSRNOG00000009271Smarca410098.637Rattus_norvegicus
ENSNGAG00000021852Smarca410098.513ENSRBIG00000038696SMARCA49998.513Rhinopithecus_bieti
ENSNGAG00000021852Smarca410098.575ENSRROG00000045509SMARCA410098.575Rhinopithecus_roxellana
ENSNGAG00000021852Smarca410098.265ENSSBOG00000026896SMARCA49998.447Saimiri_boliviensis_boliviensis
ENSNGAG00000021852Smarca410097.584ENSSHAG00000001642SMARCA410097.584Sarcophilus_harrisii
ENSNGAG00000021852Smarca410088.314ENSSFOG00015013823smarca410087.401Scleropages_formosus
ENSNGAG00000021852Smarca49190.209ENSSFOG00015009921-9290.826Scleropages_formosus
ENSNGAG00000021852Smarca410085.593ENSSMAG00000003200smarca4a10085.654Scophthalmus_maximus
ENSNGAG00000021852Smarca410082.008ENSSMAG00000014082-9981.900Scophthalmus_maximus
ENSNGAG00000021852Smarca49986.121ENSSDUG00000005388-9586.646Seriola_dumerili
ENSNGAG00000021852Smarca410083.621ENSSDUG00000017298smarca4a10084.175Seriola_dumerili
ENSNGAG00000021852Smarca49586.775ENSSLDG00000023663-9787.492Seriola_lalandi_dorsalis
ENSNGAG00000021852Smarca410086.743ENSSLDG00000024486smarca4a10086.915Seriola_lalandi_dorsalis
ENSNGAG00000021852Smarca465100.000ENSSARG00000013477SMARCA485100.000Sorex_araneus
ENSNGAG00000021852Smarca49591.943ENSSPUG00000004558SMARCA49891.694Sphenodon_punctatus
ENSNGAG00000021852Smarca410086.259ENSSPAG00000004248smarca4a10086.386Stegastes_partitus
ENSNGAG00000021852Smarca410083.037ENSSPAG00000012533-9982.454Stegastes_partitus
ENSNGAG00000021852Smarca410098.516ENSSSCG00000013629SMARCA410098.516Sus_scrofa
ENSNGAG00000021852Smarca45290.403ENSTGUG00000015488-10089.708Taeniopygia_guttata
ENSNGAG00000021852Smarca49582.238ENSTRUG00000001378SMARCA49882.763Takifugu_rubripes
ENSNGAG00000021852Smarca48981.408ENSTRUG00000004885smarca4a10082.104Takifugu_rubripes
ENSNGAG00000021852Smarca410082.896ENSTNIG00000004536SMARCA410083.374Tetraodon_nigroviridis
ENSNGAG00000021852Smarca47386.170ENSTNIG00000004859-10085.816Tetraodon_nigroviridis
ENSNGAG00000021852Smarca450100.000ENSTBEG00000000707-53100.000Tupaia_belangeri
ENSNGAG00000021852Smarca410097.021ENSTTRG00000009519SMARCA410097.021Tursiops_truncatus
ENSNGAG00000021852Smarca410098.761ENSUAMG00000014661SMARCA410098.761Ursus_americanus
ENSNGAG00000021852Smarca410097.019ENSUMAG00000022005SMARCA49998.951Ursus_maritimus
ENSNGAG00000021852Smarca410098.699ENSVVUG00000017820SMARCA49798.699Vulpes_vulpes
ENSNGAG00000021852Smarca410086.792ENSXETG00000009355smarca410086.792Xenopus_tropicalis
ENSNGAG00000021852Smarca410083.974ENSXMAG00000007030-9984.154Xiphophorus_maculatus
ENSNGAG00000021852Smarca410086.159ENSXMAG00000006321smarca4a10086.159Xiphophorus_maculatus

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