EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000021872 (Gene tree)
Gene ID: 103738862
Gene Symbol: Lsg1
Alias: D16Bwg1547e
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 31481 bases
Position: chrKL201823.1:2152279-2183759
Accession: 103738862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000023267	MMR_HSR1	PF01926.23	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000028962	-	1905	XM_008839040	ENSNGAP00000023267	634 (aa)	XP_008837262	-

Gene Model

Click here to download ENSNGAG00000021872's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000021872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000021872	Lsg1	100	79.970	ENSG00000041802	LSG1	98	90.805	Homo_sapiens
ENSNGAG00000021872	Lsg1	99	63.988	ENSAPOG00000009694	lsg1	99	63.988	Acanthochromis_polyacanthus
ENSNGAG00000021872	Lsg1	99	78.030	ENSAMEG00000009343	LSG1	99	78.756	Ailuropoda_melanoleuca
ENSNGAG00000021872	Lsg1	98	65.238	ENSACIG00000012406	lsg1	99	64.642	Amphilophus_citrinellus
ENSNGAG00000021872	Lsg1	99	63.287	ENSAOCG00000016066	lsg1	99	63.287	Amphiprion_ocellaris
ENSNGAG00000021872	Lsg1	99	63.497	ENSAPEG00000003252	lsg1	99	63.174	Amphiprion_percula
ENSNGAG00000021872	Lsg1	98	64.678	ENSATEG00000011794	lsg1	99	64.923	Anabas_testudineus
ENSNGAG00000021872	Lsg1	94	63.403	ENSACAG00000004222	LSG1	99	63.259	Anolis_carolinensis
ENSNGAG00000021872	Lsg1	100	80.880	ENSANAG00000021153	LSG1	100	82.549	Aotus_nancymaae
ENSNGAG00000021872	Lsg1	99	64.000	ENSACLG00000000520	lsg1	99	63.945	Astatotilapia_calliptera
ENSNGAG00000021872	Lsg1	99	62.519	ENSAMXG00000008271	lsg1	99	63.720	Astyanax_mexicanus
ENSNGAG00000021872	Lsg1	100	80.675	ENSBTAG00000008461	LSG1	100	80.675	Bos_taurus
ENSNGAG00000021872	Lsg1	63	52.284	WBGene00016907	C53H9.2	89	52.284	Caenorhabditis_elegans
ENSNGAG00000021872	Lsg1	100	80.577	ENSCJAG00000013962	LSG1	100	82.246	Callithrix_jacchus
ENSNGAG00000021872	Lsg1	95	78.080	ENSCAFG00000013445	LSG1	99	79.680	Canis_familiaris
ENSNGAG00000021872	Lsg1	99	77.005	ENSCAFG00020002216	LSG1	99	79.294	Canis_lupus_dingo
ENSNGAG00000021872	Lsg1	99	80.368	ENSCHIG00000015769	LSG1	99	80.982	Capra_hircus
ENSNGAG00000021872	Lsg1	100	82.549	ENSTSYG00000001447	LSG1	100	82.549	Carlito_syrichta
ENSNGAG00000021872	Lsg1	95	76.537	ENSCAPG00000009856	LSG1	100	76.214	Cavia_aperea
ENSNGAG00000021872	Lsg1	100	81.470	ENSCCAG00000035744	LSG1	100	83.155	Cebus_capucinus
ENSNGAG00000021872	Lsg1	100	79.970	ENSCATG00000042060	LSG1	100	80.425	Cercocebus_atys
ENSNGAG00000021872	Lsg1	100	80.273	ENSCSAG00000008796	LSG1	92	81.791	Chlorocebus_sabaeus
ENSNGAG00000021872	Lsg1	99	67.722	ENSCPBG00000015941	LSG1	83	68.636	Chrysemys_picta_bellii
ENSNGAG00000021872	Lsg1	83	47.681	ENSCING00000007079	-	99	47.681	Ciona_intestinalis
ENSNGAG00000021872	Lsg1	84	48.609	ENSCSAVG00000002514	-	95	54.032	Ciona_savignyi
ENSNGAG00000021872	Lsg1	100	80.121	ENSCANG00000030709	LSG1	100	81.639	Colobus_angolensis_palliatus
ENSNGAG00000021872	Lsg1	100	86.810	ENSCGRG00001019846	Lsg1	100	86.810	Cricetulus_griseus_chok1gshd
ENSNGAG00000021872	Lsg1	100	86.810	ENSCGRG00000014617	Lsg1	100	86.810	Cricetulus_griseus_crigri
ENSNGAG00000021872	Lsg1	98	63.158	ENSCSEG00000008522	lsg1	99	62.232	Cynoglossus_semilaevis
ENSNGAG00000021872	Lsg1	97	65.873	ENSCVAG00000002484	lsg1	99	65.480	Cyprinodon_variegatus
ENSNGAG00000021872	Lsg1	99	65.449	ENSDARG00000015352	lsg1	99	64.840	Danio_rerio
ENSNGAG00000021872	Lsg1	100	79.452	ENSDNOG00000006224	LSG1	100	79.148	Dasypus_novemcinctus
ENSNGAG00000021872	Lsg1	99	47.158	FBgn0266284	Ns3	99	47.612	Drosophila_melanogaster
ENSNGAG00000021872	Lsg1	88	89.333	ENSETEG00000003888	LSG1	89	89.333	Echinops_telfairi
ENSNGAG00000021872	Lsg1	88	56.014	ENSEBUG00000003119	lsg1	85	55.479	Eptatretus_burgeri
ENSNGAG00000021872	Lsg1	100	79.666	ENSEASG00005000678	LSG1	100	81.032	Equus_asinus_asinus
ENSNGAG00000021872	Lsg1	100	81.184	ENSECAG00000017659	LSG1	100	81.184	Equus_caballus
ENSNGAG00000021872	Lsg1	88	81.034	ENSEEUG00000015217	LSG1	87	81.034	Erinaceus_europaeus
ENSNGAG00000021872	Lsg1	99	62.422	ENSELUG00000023973	lsg1	99	62.422	Esox_lucius
ENSNGAG00000021872	Lsg1	99	80.243	ENSFCAG00000024957	LSG1	99	80.243	Felis_catus
ENSNGAG00000021872	Lsg1	99	61.679	ENSFALG00000007210	LSG1	99	62.595	Ficedula_albicollis
ENSNGAG00000021872	Lsg1	100	77.914	ENSFDAG00000017373	LSG1	100	77.914	Fukomys_damarensis
ENSNGAG00000021872	Lsg1	97	65.142	ENSFHEG00000003680	lsg1	99	64.319	Fundulus_heteroclitus
ENSNGAG00000021872	Lsg1	83	71.193	ENSGMOG00000015834	lsg1	87	70.134	Gadus_morhua
ENSNGAG00000021872	Lsg1	99	63.772	ENSGALG00000007058	LSG1	87	64.072	Gallus_gallus
ENSNGAG00000021872	Lsg1	97	66.774	ENSGAFG00000015831	lsg1	99	66.406	Gambusia_affinis
ENSNGAG00000021872	Lsg1	98	62.402	ENSGACG00000009323	lsg1	99	62.080	Gasterosteus_aculeatus
ENSNGAG00000021872	Lsg1	100	79.818	ENSGGOG00000000520	LSG1	100	81.335	Gorilla_gorilla
ENSNGAG00000021872	Lsg1	99	64.043	ENSHBUG00000005659	lsg1	99	63.988	Haplochromis_burtoni
ENSNGAG00000021872	Lsg1	100	75.457	ENSHGLG00000017390	LSG1	100	76.852	Heterocephalus_glaber_female
ENSNGAG00000021872	Lsg1	100	75.457	ENSHGLG00100018587	LSG1	100	76.852	Heterocephalus_glaber_male
ENSNGAG00000021872	Lsg1	97	64.420	ENSHCOG00000016848	lsg1	99	64.099	Hippocampus_comes
ENSNGAG00000021872	Lsg1	99	64.087	ENSIPUG00000008631	lsg1	99	63.820	Ictalurus_punctatus
ENSNGAG00000021872	Lsg1	80	79.798	ENSSTOG00000010234	LSG1	99	80.000	Ictidomys_tridecemlineatus
ENSNGAG00000021872	Lsg1	100	81.346	ENSJJAG00000015513	Lsg1	100	81.346	Jaculus_jaculus
ENSNGAG00000021872	Lsg1	98	62.677	ENSKMAG00000009681	lsg1	99	61.796	Kryptolebias_marmoratus
ENSNGAG00000021872	Lsg1	98	64.353	ENSLBEG00000024261	lsg1	99	63.608	Labrus_bergylta
ENSNGAG00000021872	Lsg1	99	64.759	ENSLACG00000013399	LSG1	99	64.137	Latimeria_chalumnae
ENSNGAG00000021872	Lsg1	98	64.036	ENSLOCG00000004918	lsg1	99	64.350	Lepisosteus_oculatus
ENSNGAG00000021872	Lsg1	100	80.982	ENSLAFG00000012919	-	100	80.982	Loxodonta_africana
ENSNGAG00000021872	Lsg1	100	80.121	ENSMFAG00000039903	LSG1	100	80.577	Macaca_fascicularis
ENSNGAG00000021872	Lsg1	100	80.273	ENSMMUG00000010708	LSG1	100	81.791	Macaca_mulatta
ENSNGAG00000021872	Lsg1	100	80.121	ENSMNEG00000031538	LSG1	100	80.577	Macaca_nemestrina
ENSNGAG00000021872	Lsg1	100	80.273	ENSMLEG00000041184	LSG1	100	81.791	Mandrillus_leucophaeus
ENSNGAG00000021872	Lsg1	99	64.099	ENSMAMG00000000470	lsg1	99	63.790	Mastacembelus_armatus
ENSNGAG00000021872	Lsg1	99	64.198	ENSMZEG00005017865	lsg1	99	64.142	Maylandia_zebra
ENSNGAG00000021872	Lsg1	88	64.736	ENSMGAG00000007050	LSG1	99	65.077	Meleagris_gallopavo
ENSNGAG00000021872	Lsg1	91	85.908	ENSMAUG00000016976	Lsg1	93	85.908	Mesocricetus_auratus
ENSNGAG00000021872	Lsg1	100	80.488	ENSMICG00000049087	LSG1	100	80.488	Microcebus_murinus
ENSNGAG00000021872	Lsg1	100	85.494	ENSMOCG00000022136	Lsg1	100	85.208	Microtus_ochrogaster
ENSNGAG00000021872	Lsg1	85	72.917	ENSMMOG00000008884	lsg1	99	63.240	Mola_mola
ENSNGAG00000021872	Lsg1	99	58.939	ENSMODG00000019828	LSG1	99	58.333	Monodelphis_domestica
ENSNGAG00000021872	Lsg1	100	83.103	MGP_CAROLIEiJ_G0020648	Lsg1	100	83.103	Mus_caroli
ENSNGAG00000021872	Lsg1	100	83.717	ENSMUSG00000022538	Lsg1	100	83.717	Mus_musculus
ENSNGAG00000021872	Lsg1	98	84.399	MGP_PahariEiJ_G0016352	Lsg1	100	84.356	Mus_pahari
ENSNGAG00000021872	Lsg1	100	84.025	MGP_SPRETEiJ_G0021544	Lsg1	100	84.025	Mus_spretus
ENSNGAG00000021872	Lsg1	99	77.964	ENSMPUG00000003734	LSG1	99	79.179	Mustela_putorius_furo
ENSNGAG00000021872	Lsg1	99	82.515	ENSMLUG00000012548	LSG1	99	82.515	Myotis_lucifugus
ENSNGAG00000021872	Lsg1	100	80.425	ENSNLEG00000008293	LSG1	100	81.791	Nomascus_leucogenys
ENSNGAG00000021872	Lsg1	70	71.134	ENSMEUG00000009041	-	82	71.134	Notamacropus_eugenii
ENSNGAG00000021872	Lsg1	99	62.369	ENSONIG00000002635	lsg1	99	63.524	Oreochromis_niloticus
ENSNGAG00000021872	Lsg1	95	72.313	ENSOANG00000012742	LSG1	99	71.429	Ornithorhynchus_anatinus
ENSNGAG00000021872	Lsg1	100	82.246	ENSOCUG00000004817	LSG1	100	82.246	Oryctolagus_cuniculus
ENSNGAG00000021872	Lsg1	98	65.916	ENSORLG00000007695	lsg1	99	65.723	Oryzias_latipes
ENSNGAG00000021872	Lsg1	98	65.971	ENSORLG00020016286	lsg1	99	64.937	Oryzias_latipes_hni
ENSNGAG00000021872	Lsg1	98	65.756	ENSORLG00015012025	lsg1	99	65.039	Oryzias_latipes_hsok
ENSNGAG00000021872	Lsg1	98	63.651	ENSOMEG00000022379	lsg1	99	63.101	Oryzias_melastigma
ENSNGAG00000021872	Lsg1	100	80.241	ENSOGAG00000003475	LSG1	100	81.297	Otolemur_garnettii
ENSNGAG00000021872	Lsg1	99	79.755	ENSOARG00000020403	LSG1	99	79.908	Ovis_aries
ENSNGAG00000021872	Lsg1	100	81.335	ENSPPAG00000029271	LSG1	100	81.335	Pan_paniscus
ENSNGAG00000021872	Lsg1	99	79.398	ENSPPRG00000010281	LSG1	99	79.398	Panthera_pardus
ENSNGAG00000021872	Lsg1	99	80.395	ENSPTIG00000010789	LSG1	99	80.395	Panthera_tigris_altaica
ENSNGAG00000021872	Lsg1	100	81.184	ENSPTRG00000015760	LSG1	100	81.184	Pan_troglodytes
ENSNGAG00000021872	Lsg1	100	80.121	ENSPANG00000018249	LSG1	100	80.577	Papio_anubis
ENSNGAG00000021872	Lsg1	97	63.722	ENSPKIG00000002895	lsg1	100	63.441	Paramormyrops_kingsleyae
ENSNGAG00000021872	Lsg1	96	65.409	ENSPSIG00000009821	LSG1	99	64.455	Pelodiscus_sinensis
ENSNGAG00000021872	Lsg1	95	64.773	ENSPMGG00000000931	lsg1	99	64.448	Periophthalmus_magnuspinnatus
ENSNGAG00000021872	Lsg1	100	85.168	ENSPEMG00000012082	-	100	84.709	Peromyscus_maniculatus_bairdii
ENSNGAG00000021872	Lsg1	99	57.292	ENSPMAG00000007451	lsg1	99	57.721	Petromyzon_marinus
ENSNGAG00000021872	Lsg1	99	66.842	ENSPCIG00000013890	LSG1	83	66.842	Phascolarctos_cinereus
ENSNGAG00000021872	Lsg1	97	65.566	ENSPFOG00000021882	lsg1	99	64.885	Poecilia_formosa
ENSNGAG00000021872	Lsg1	97	66.190	ENSPLAG00000019536	lsg1	99	65.639	Poecilia_latipinna
ENSNGAG00000021872	Lsg1	97	64.890	ENSPMEG00000017281	lsg1	99	64.079	Poecilia_mexicana
ENSNGAG00000021872	Lsg1	97	56.006	ENSPREG00000006048	lsg1	99	55.505	Poecilia_reticulata
ENSNGAG00000021872	Lsg1	92	80.624	ENSPPYG00000014425	LSG1	100	79.770	Pongo_abelii
ENSNGAG00000021872	Lsg1	89	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSNGAG00000021872	Lsg1	100	81.470	ENSPCOG00000012360	LSG1	100	82.389	Propithecus_coquereli
ENSNGAG00000021872	Lsg1	99	63.846	ENSPNYG00000021994	lsg1	99	63.790	Pundamilia_nyererei
ENSNGAG00000021872	Lsg1	99	64.688	ENSPNAG00000015533	lsg1	99	64.580	Pygocentrus_nattereri
ENSNGAG00000021872	Lsg1	100	84.885	ENSRNOG00000001727	Lsg1	100	84.885	Rattus_norvegicus
ENSNGAG00000021872	Lsg1	100	81.184	ENSRBIG00000029053	LSG1	100	81.184	Rhinopithecus_bieti
ENSNGAG00000021872	Lsg1	100	81.184	ENSRROG00000037702	LSG1	100	81.184	Rhinopithecus_roxellana
ENSNGAG00000021872	Lsg1	59	56.287	YGL099W	LSG1	62	56.287	Saccharomyces_cerevisiae
ENSNGAG00000021872	Lsg1	100	80.425	ENSSBOG00000034938	LSG1	100	82.094	Saimiri_boliviensis_boliviensis
ENSNGAG00000021872	Lsg1	77	64.639	ENSSHAG00000003487	LSG1	99	64.449	Sarcophilus_harrisii
ENSNGAG00000021872	Lsg1	98	63.551	ENSSFOG00015008955	lsg1	99	62.693	Scleropages_formosus
ENSNGAG00000021872	Lsg1	98	64.929	ENSSDUG00000004622	lsg1	99	63.720	Seriola_dumerili
ENSNGAG00000021872	Lsg1	98	64.025	ENSSLDG00000010869	lsg1	99	64.596	Seriola_lalandi_dorsalis
ENSNGAG00000021872	Lsg1	83	78.529	ENSSARG00000012981	LSG1	81	78.529	Sorex_araneus
ENSNGAG00000021872	Lsg1	99	65.022	ENSSPUG00000016347	LSG1	99	65.291	Sphenodon_punctatus
ENSNGAG00000021872	Lsg1	99	64.006	ENSSPAG00000005508	lsg1	99	64.219	Stegastes_partitus
ENSNGAG00000021872	Lsg1	99	79.109	ENSSSCG00000011827	LSG1	99	79.263	Sus_scrofa
ENSNGAG00000021872	Lsg1	88	62.521	ENSTGUG00000009068	LSG1	99	63.025	Taeniopygia_guttata
ENSNGAG00000021872	Lsg1	97	62.880	ENSTRUG00000017380	lsg1	99	62.090	Takifugu_rubripes
ENSNGAG00000021872	Lsg1	97	64.094	ENSTNIG00000015570	lsg1	99	63.594	Tetraodon_nigroviridis
ENSNGAG00000021872	Lsg1	99	74.119	ENSTTRG00000000559	LSG1	99	73.201	Tursiops_truncatus
ENSNGAG00000021872	Lsg1	99	79.939	ENSUAMG00000012454	LSG1	99	80.395	Ursus_americanus
ENSNGAG00000021872	Lsg1	99	79.939	ENSUMAG00000000855	LSG1	99	80.395	Ursus_maritimus
ENSNGAG00000021872	Lsg1	95	75.520	ENSVPAG00000012400	LSG1	99	74.519	Vicugna_pacos
ENSNGAG00000021872	Lsg1	95	78.675	ENSVVUG00000008956	LSG1	97	80.291	Vulpes_vulpes
ENSNGAG00000021872	Lsg1	99	65.350	ENSXETG00000003451	lsg1	99	66.460	Xenopus_tropicalis
ENSNGAG00000021872	Lsg1	97	65.665	ENSXCOG00000003239	lsg1	99	65.835	Xiphophorus_couchianus
ENSNGAG00000021872	Lsg1	97	66.184	ENSXMAG00000005536	lsg1	99	64.308	Xiphophorus_maculatus