EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000021884 (Gene tree)
Gene ID: 103746171
Gene Symbol: -
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 40834 bases
Position: chrKL203572.1:801103-841936
Accession: 103746171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000023297	SF3b1	PF08920.10	3.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000028993	-	3900	XM_008848288	ENSNGAP00000023297	1299 (aa)	XP_008846510	-

Gene Model

Click here to download ENSNGAG00000021884's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000021884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000021884	-	100	99.692	ENSG00000115524	SF3B1	99	99.692	Homo_sapiens
ENSNGAG00000021884	-	100	93.298	ENSAPOG00000011894	sf3b1	99	93.298	Acanthochromis_polyacanthus
ENSNGAG00000021884	-	99	99.923	ENSAMEG00000013809	SF3B1	99	99.923	Ailuropoda_melanoleuca
ENSNGAG00000021884	-	100	92.890	ENSACIG00000020910	sf3b1	96	93.011	Amphilophus_citrinellus
ENSNGAG00000021884	-	100	93.298	ENSAOCG00000004478	sf3b1	99	93.298	Amphiprion_ocellaris
ENSNGAG00000021884	-	100	93.298	ENSAPEG00000012937	sf3b1	99	93.298	Amphiprion_percula
ENSNGAG00000021884	-	100	93.369	ENSATEG00000020435	sf3b1	99	93.430	Anabas_testudineus
ENSNGAG00000021884	-	99	99.382	ENSAPLG00000003993	SF3B1	99	99.382	Anas_platyrhynchos
ENSNGAG00000021884	-	99	98.918	ENSACAG00000009612	SF3B1	99	98.918	Anolis_carolinensis
ENSNGAG00000021884	-	100	99.769	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSNGAG00000021884	-	100	92.530	ENSACLG00000023470	sf3b1	99	92.378	Astatotilapia_calliptera
ENSNGAG00000021884	-	100	93.826	ENSAMXG00000002219	sf3b1	99	93.674	Astyanax_mexicanus
ENSNGAG00000021884	-	100	99.615	ENSBTAG00000008915	SF3B1	99	99.615	Bos_taurus
ENSNGAG00000021884	-	99	65.579	WBGene00011605	sftb-1	99	65.678	Caenorhabditis_elegans
ENSNGAG00000021884	-	100	99.692	ENSCJAG00000003902	SF3B1	99	99.692	Callithrix_jacchus
ENSNGAG00000021884	-	100	99.692	ENSCAFG00000010826	SF3B1	99	99.692	Canis_familiaris
ENSNGAG00000021884	-	100	99.692	ENSCAFG00020004750	SF3B1	99	99.692	Canis_lupus_dingo
ENSNGAG00000021884	-	100	99.615	ENSCHIG00000015226	SF3B1	99	99.845	Capra_hircus
ENSNGAG00000021884	-	100	99.692	ENSTSYG00000009214	SF3B1	99	99.846	Carlito_syrichta
ENSNGAG00000021884	-	99	100.000	ENSCAPG00000006547	SF3B1	99	100.000	Cavia_aperea
ENSNGAG00000021884	-	99	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSNGAG00000021884	-	100	99.692	ENSCCAG00000020506	SF3B1	99	99.692	Cebus_capucinus
ENSNGAG00000021884	-	100	99.692	ENSCATG00000035735	SF3B1	99	99.692	Cercocebus_atys
ENSNGAG00000021884	-	99	100.000	ENSCLAG00000014767	SF3B1	99	100.000	Chinchilla_lanigera
ENSNGAG00000021884	-	100	99.692	ENSCSAG00000011505	SF3B1	99	99.692	Chlorocebus_sabaeus
ENSNGAG00000021884	-	76	96.154	ENSCHOG00000009860	SF3B1	76	96.154	Choloepus_hoffmanni
ENSNGAG00000021884	-	100	98.923	ENSCPBG00000021902	SF3B1	99	99.406	Chrysemys_picta_bellii
ENSNGAG00000021884	-	69	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSNGAG00000021884	-	99	80.168	ENSCSAVG00000002559	-	99	79.771	Ciona_savignyi
ENSNGAG00000021884	-	100	99.692	ENSCANG00000029415	SF3B1	99	100.000	Colobus_angolensis_palliatus
ENSNGAG00000021884	-	100	99.692	ENSCGRG00001016990	Sf3b1	99	100.000	Cricetulus_griseus_chok1gshd
ENSNGAG00000021884	-	100	99.692	ENSCGRG00000005301	Sf3b1	99	100.000	Cricetulus_griseus_crigri
ENSNGAG00000021884	-	100	89.755	ENSCSEG00000003860	sf3b1	99	89.679	Cynoglossus_semilaevis
ENSNGAG00000021884	-	96	93.339	ENSCVAG00000003680	sf3b1	99	93.339	Cyprinodon_variegatus
ENSNGAG00000021884	-	99	93.573	ENSDARG00000056138	sf3b1	99	93.497	Danio_rerio
ENSNGAG00000021884	-	100	99.616	ENSDNOG00000011754	SF3B1	99	99.616	Dasypus_novemcinctus
ENSNGAG00000021884	-	99	97.295	ENSDORG00000002399	Sf3b1	99	97.295	Dipodomys_ordii
ENSNGAG00000021884	-	99	76.741	FBgn0031266	Sf3b1	99	76.741	Drosophila_melanogaster
ENSNGAG00000021884	-	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSNGAG00000021884	-	100	87.003	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSNGAG00000021884	-	100	99.615	ENSEASG00005020159	SF3B1	97	99.615	Equus_asinus_asinus
ENSNGAG00000021884	-	100	99.615	ENSECAG00000021657	SF3B1	97	99.615	Equus_caballus
ENSNGAG00000021884	-	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSNGAG00000021884	-	100	92.808	ENSELUG00000005977	sf3b1	98	92.657	Esox_lucius
ENSNGAG00000021884	-	100	99.692	ENSFCAG00000005038	SF3B1	99	100.000	Felis_catus
ENSNGAG00000021884	-	99	99.459	ENSFALG00000004281	SF3B1	99	99.459	Ficedula_albicollis
ENSNGAG00000021884	-	100	99.692	ENSFDAG00000017510	SF3B1	99	99.692	Fukomys_damarensis
ENSNGAG00000021884	-	100	92.612	ENSFHEG00000014333	sf3b1	99	92.612	Fundulus_heteroclitus
ENSNGAG00000021884	-	100	93.206	ENSGMOG00000006773	sf3b1	99	93.206	Gadus_morhua
ENSNGAG00000021884	-	100	99.077	ENSGALG00000008038	SF3B1	99	99.077	Gallus_gallus
ENSNGAG00000021884	-	99	93.441	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSNGAG00000021884	-	100	93.349	ENSGACG00000008839	sf3b1	99	93.349	Gasterosteus_aculeatus
ENSNGAG00000021884	-	99	99.227	ENSGAGG00000017478	SF3B1	99	99.227	Gopherus_agassizii
ENSNGAG00000021884	-	100	93.037	ENSGGOG00000009264	SF3B1	100	94.095	Gorilla_gorilla
ENSNGAG00000021884	-	99	92.595	ENSHBUG00000007705	sf3b1	99	92.443	Haplochromis_burtoni
ENSNGAG00000021884	-	99	100.000	ENSHGLG00000008285	-	99	100.000	Heterocephalus_glaber_female
ENSNGAG00000021884	-	99	97.991	ENSHGLG00100005535	-	99	97.991	Heterocephalus_glaber_male
ENSNGAG00000021884	-	99	92.998	ENSHCOG00000016775	sf3b1	99	92.846	Hippocampus_comes
ENSNGAG00000021884	-	100	93.674	ENSIPUG00000013171	sf3b1	99	93.674	Ictalurus_punctatus
ENSNGAG00000021884	-	100	99.692	ENSSTOG00000011034	SF3B1	99	99.692	Ictidomys_tridecemlineatus
ENSNGAG00000021884	-	99	99.922	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSNGAG00000021884	-	100	92.781	ENSKMAG00000004009	sf3b1	99	92.705	Kryptolebias_marmoratus
ENSNGAG00000021884	-	100	93.262	ENSLBEG00000022208	sf3b1	99	93.109	Labrus_bergylta
ENSNGAG00000021884	-	99	92.490	ENSLACG00000014832	SF3B1	99	92.490	Latimeria_chalumnae
ENSNGAG00000021884	-	100	94.597	ENSLOCG00000003899	sf3b1	99	94.444	Lepisosteus_oculatus
ENSNGAG00000021884	-	100	99.692	ENSLAFG00000001956	SF3B1	99	99.923	Loxodonta_africana
ENSNGAG00000021884	-	99	100.000	ENSMMUG00000022430	SF3B1	99	100.000	Macaca_mulatta
ENSNGAG00000021884	-	100	99.692	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSNGAG00000021884	-	95	93.478	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSNGAG00000021884	-	100	93.293	ENSMAMG00000010241	sf3b1	99	93.293	Mastacembelus_armatus
ENSNGAG00000021884	-	100	92.530	ENSMZEG00005021254	sf3b1	99	92.378	Maylandia_zebra
ENSNGAG00000021884	-	99	98.764	ENSMGAG00000007017	SF3B1	99	98.764	Meleagris_gallopavo
ENSNGAG00000021884	-	99	95.750	ENSMAUG00000009071	Sf3b1	99	95.750	Mesocricetus_auratus
ENSNGAG00000021884	-	100	99.615	ENSMICG00000013879	SF3B1	99	99.923	Microcebus_murinus
ENSNGAG00000021884	-	99	95.595	ENSMOCG00000000455	Sf3b1	99	95.595	Microtus_ochrogaster
ENSNGAG00000021884	-	83	92.759	ENSMMOG00000000475	sf3b1	99	92.759	Mola_mola
ENSNGAG00000021884	-	100	99.000	ENSMODG00000012275	SF3B1	99	99.000	Monodelphis_domestica
ENSNGAG00000021884	-	100	93.216	ENSMALG00000017211	sf3b1	99	93.216	Monopterus_albus
ENSNGAG00000021884	-	100	99.692	MGP_CAROLIEiJ_G0014141	Sf3b1	99	99.692	Mus_caroli
ENSNGAG00000021884	-	100	99.692	ENSMUSG00000025982	Sf3b1	99	99.692	Mus_musculus
ENSNGAG00000021884	-	100	99.692	MGP_SPRETEiJ_G0014947	Sf3b1	99	99.692	Mus_spretus
ENSNGAG00000021884	-	100	99.692	ENSMPUG00000007799	SF3B1	99	99.692	Mustela_putorius_furo
ENSNGAG00000021884	-	100	98.462	ENSMLUG00000000840	SF3B1	99	98.462	Myotis_lucifugus
ENSNGAG00000021884	-	100	88.770	ENSNBRG00000015816	sf3b1	99	88.770	Neolamprologus_brichardi
ENSNGAG00000021884	-	100	99.692	ENSNLEG00000006861	SF3B1	99	100.000	Nomascus_leucogenys
ENSNGAG00000021884	-	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSNGAG00000021884	-	100	87.769	ENSOPRG00000008596	SF3B1	99	87.769	Ochotona_princeps
ENSNGAG00000021884	-	100	99.692	ENSODEG00000011153	-	99	99.692	Octodon_degus
ENSNGAG00000021884	-	100	92.530	ENSONIG00000013758	sf3b1	99	92.378	Oreochromis_niloticus
ENSNGAG00000021884	-	83	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSNGAG00000021884	-	100	93.064	ENSORLG00000020219	sf3b1	99	93.064	Oryzias_latipes
ENSNGAG00000021884	-	100	93.064	ENSORLG00020001746	sf3b1	99	93.064	Oryzias_latipes_hni
ENSNGAG00000021884	-	64	90.431	ENSORLG00015001759	sf3b1	98	90.431	Oryzias_latipes_hsok
ENSNGAG00000021884	-	100	93.069	ENSOMEG00000019231	sf3b1	99	93.069	Oryzias_melastigma
ENSNGAG00000021884	-	100	99.615	ENSOARG00000015374	SF3B1	99	99.615	Ovis_aries
ENSNGAG00000021884	-	100	99.692	ENSPPAG00000035007	SF3B1	99	100.000	Pan_paniscus
ENSNGAG00000021884	-	100	99.692	ENSPPRG00000009090	SF3B1	99	99.692	Panthera_pardus
ENSNGAG00000021884	-	100	99.692	ENSPTIG00000021557	SF3B1	99	99.692	Panthera_tigris_altaica
ENSNGAG00000021884	-	99	91.448	ENSPTRG00000012771	SF3B1	99	91.448	Pan_troglodytes
ENSNGAG00000021884	-	100	99.692	ENSPANG00000013417	SF3B1	99	99.692	Papio_anubis
ENSNGAG00000021884	-	100	94.733	ENSPKIG00000000784	sf3b1	99	94.580	Paramormyrops_kingsleyae
ENSNGAG00000021884	-	99	97.992	ENSPSIG00000017222	SF3B1	99	97.992	Pelodiscus_sinensis
ENSNGAG00000021884	-	90	93.660	ENSPMGG00000004330	sf3b1	99	93.491	Periophthalmus_magnuspinnatus
ENSNGAG00000021884	-	99	100.000	ENSPEMG00000010699	Sf3b1	99	100.000	Peromyscus_maniculatus_bairdii
ENSNGAG00000021884	-	99	90.207	ENSPMAG00000001311	sf3b1	99	90.360	Petromyzon_marinus
ENSNGAG00000021884	-	100	98.923	ENSPCIG00000010642	SF3B1	99	98.923	Phascolarctos_cinereus
ENSNGAG00000021884	-	100	92.998	ENSPFOG00000000073	sf3b1	99	92.998	Poecilia_formosa
ENSNGAG00000021884	-	100	93.069	ENSPLAG00000002293	sf3b1	99	93.069	Poecilia_latipinna
ENSNGAG00000021884	-	100	93.069	ENSPMEG00000000446	sf3b1	98	93.069	Poecilia_mexicana
ENSNGAG00000021884	-	100	93.145	ENSPREG00000019652	sf3b1	99	93.145	Poecilia_reticulata
ENSNGAG00000021884	-	100	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSNGAG00000021884	-	100	99.538	ENSPCAG00000009292	SF3B1	99	99.538	Procavia_capensis
ENSNGAG00000021884	-	100	99.615	ENSPCOG00000024074	SF3B1	99	99.615	Propithecus_coquereli
ENSNGAG00000021884	-	100	99.692	ENSPVAG00000008302	SF3B1	99	99.692	Pteropus_vampyrus
ENSNGAG00000021884	-	100	92.530	ENSPNYG00000014939	sf3b1	99	92.378	Pundamilia_nyererei
ENSNGAG00000021884	-	100	93.674	ENSPNAG00000008288	sf3b1	99	93.674	Pygocentrus_nattereri
ENSNGAG00000021884	-	100	99.692	ENSRNOG00000013516	Sf3b1	99	99.692	Rattus_norvegicus
ENSNGAG00000021884	-	99	96.445	ENSRBIG00000026096	SF3B1	99	96.445	Rhinopithecus_bieti
ENSNGAG00000021884	-	100	99.692	ENSRROG00000031308	SF3B1	99	100.000	Rhinopithecus_roxellana
ENSNGAG00000021884	-	100	99.692	ENSSBOG00000020080	SF3B1	99	99.692	Saimiri_boliviensis_boliviensis
ENSNGAG00000021884	-	100	99.000	ENSSHAG00000017564	SF3B1	99	99.228	Sarcophilus_harrisii
ENSNGAG00000021884	-	100	94.288	ENSSFOG00015021535	sf3b1	99	94.440	Scleropages_formosus
ENSNGAG00000021884	-	99	92.629	ENSSMAG00000013977	sf3b1	99	92.477	Scophthalmus_maximus
ENSNGAG00000021884	-	100	93.064	ENSSDUG00000017422	sf3b1	99	93.064	Seriola_dumerili
ENSNGAG00000021884	-	100	92.988	ENSSLDG00000019495	sf3b1	99	92.988	Seriola_lalandi_dorsalis
ENSNGAG00000021884	-	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSNGAG00000021884	-	100	98.769	ENSSPUG00000000410	SF3B1	99	98.769	Sphenodon_punctatus
ENSNGAG00000021884	-	100	93.369	ENSSPAG00000010451	sf3b1	98	93.369	Stegastes_partitus
ENSNGAG00000021884	-	91	99.241	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSNGAG00000021884	-	100	99.000	ENSTGUG00000010553	SF3B1	99	99.000	Taeniopygia_guttata
ENSNGAG00000021884	-	100	93.140	ENSTRUG00000015534	sf3b1	99	92.988	Takifugu_rubripes
ENSNGAG00000021884	-	88	99.793	ENSTBEG00000008714	SF3B1	93	99.793	Tupaia_belangeri
ENSNGAG00000021884	-	92	94.185	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSNGAG00000021884	-	94	95.688	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSNGAG00000021884	-	100	99.692	ENSUMAG00000020945	SF3B1	99	99.692	Ursus_maritimus
ENSNGAG00000021884	-	100	91.538	ENSVPAG00000005798	SF3B1	99	91.538	Vicugna_pacos
ENSNGAG00000021884	-	100	99.692	ENSVVUG00000025948	SF3B1	94	99.692	Vulpes_vulpes
ENSNGAG00000021884	-	99	96.754	ENSXETG00000013339	sf3b1	99	96.754	Xenopus_tropicalis
ENSNGAG00000021884	-	100	89.571	ENSXCOG00000018086	sf3b1	99	89.458	Xiphophorus_couchianus
ENSNGAG00000021884	-	100	93.069	ENSXMAG00000007369	sf3b1	99	93.364	Xiphophorus_maculatus