EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000021993 (Gene tree)
Gene ID: 103738236
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|HELIC2|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 32752 bases
Position: chrKL198913.1:909151-941902
Accession: 103738236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000023450	ResIII	PF04851.15	1.4e-25	1	2
ENSNGAP00000023450	ResIII	PF04851.15	1.4e-25	2	2
ENSNGAP00000023450	DEAD	PF00270.29	2.1e-52	1	2
ENSNGAP00000023450	DEAD	PF00270.29	2.1e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000029148	-	6823	XM_008838112	ENSNGAP00000023450	2136 (aa)	XP_008836334	UPI0004ED17D1

Gene Model

Click here to download ENSNGAG00000021993's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000021993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000021993	Snrnp200	86	42.532	ENSNGAG00000000702	Ascc3	80	44.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000021993	Snrnp200	100	99.906	ENSG00000144028	SNRNP200	100	99.906	Homo_sapiens
ENSNGAG00000021993	Snrnp200	99	90.888	ENSAPOG00000010223	snrnp200	99	90.777	Acanthochromis_polyacanthus
ENSNGAG00000021993	Snrnp200	100	99.860	ENSAMEG00000008996	SNRNP200	100	99.860	Ailuropoda_melanoleuca
ENSNGAG00000021993	Snrnp200	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSNGAG00000021993	Snrnp200	99	90.794	ENSAOCG00000024593	snrnp200	100	90.043	Amphiprion_ocellaris
ENSNGAG00000021993	Snrnp200	97	90.096	ENSAPEG00000012554	snrnp200	100	90.096	Amphiprion_percula
ENSNGAG00000021993	Snrnp200	99	90.653	ENSATEG00000022522	snrnp200	99	90.543	Anabas_testudineus
ENSNGAG00000021993	Snrnp200	99	97.690	ENSAPLG00000004313	SNRNP200	100	97.690	Anas_platyrhynchos
ENSNGAG00000021993	Snrnp200	99	97.497	ENSACAG00000000434	SNRNP200	100	97.497	Anolis_carolinensis
ENSNGAG00000021993	Snrnp200	100	95.336	ENSANAG00000036625	SNRNP200	100	95.756	Aotus_nancymaae
ENSNGAG00000021993	Snrnp200	99	90.512	ENSACLG00000011188	snrnp200	99	90.403	Astatotilapia_calliptera
ENSNGAG00000021993	Snrnp200	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSNGAG00000021993	Snrnp200	100	99.298	ENSBTAG00000000848	SNRNP200	100	99.298	Bos_taurus
ENSNGAG00000021993	Snrnp200	100	99.860	ENSCJAG00000007514	SNRNP200	100	99.860	Callithrix_jacchus
ENSNGAG00000021993	Snrnp200	100	99.067	ENSCAFG00020019979	SNRNP200	100	99.883	Canis_lupus_dingo
ENSNGAG00000021993	Snrnp200	100	99.485	ENSCHIG00000020611	SNRNP200	100	99.485	Capra_hircus
ENSNGAG00000021993	Snrnp200	100	99.906	ENSTSYG00000010467	SNRNP200	100	99.906	Carlito_syrichta
ENSNGAG00000021993	Snrnp200	99	99.436	ENSCAPG00000017234	SNRNP200	99	99.436	Cavia_aperea
ENSNGAG00000021993	Snrnp200	100	99.719	ENSCPOG00000006776	SNRNP200	100	99.719	Cavia_porcellus
ENSNGAG00000021993	Snrnp200	100	99.860	ENSCCAG00000033962	SNRNP200	100	99.860	Cebus_capucinus
ENSNGAG00000021993	Snrnp200	100	99.906	ENSCATG00000015790	SNRNP200	100	99.906	Cercocebus_atys
ENSNGAG00000021993	Snrnp200	100	99.579	ENSCLAG00000004116	SNRNP200	100	99.579	Chinchilla_lanigera
ENSNGAG00000021993	Snrnp200	100	99.860	ENSCSAG00000017369	SNRNP200	100	99.860	Chlorocebus_sabaeus
ENSNGAG00000021993	Snrnp200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSNGAG00000021993	Snrnp200	100	97.756	ENSCPBG00000022571	SNRNP200	100	97.756	Chrysemys_picta_bellii
ENSNGAG00000021993	Snrnp200	99	76.553	ENSCING00000005082	-	99	76.693	Ciona_intestinalis
ENSNGAG00000021993	Snrnp200	100	94.395	ENSCANG00000033932	SNRNP200	100	99.851	Colobus_angolensis_palliatus
ENSNGAG00000021993	Snrnp200	100	99.860	ENSCGRG00001022610	Snrnp200	100	99.860	Cricetulus_griseus_chok1gshd
ENSNGAG00000021993	Snrnp200	100	99.299	ENSCGRG00000016472	Snrnp200	100	99.299	Cricetulus_griseus_crigri
ENSNGAG00000021993	Snrnp200	100	89.888	ENSCSEG00000016399	snrnp200	100	89.888	Cynoglossus_semilaevis
ENSNGAG00000021993	Snrnp200	100	85.627	ENSCVAG00000017631	snrnp200	99	85.627	Cyprinodon_variegatus
ENSNGAG00000021993	Snrnp200	100	90.356	ENSDARG00000077536	snrnp200	99	90.356	Danio_rerio
ENSNGAG00000021993	Snrnp200	100	98.268	ENSDNOG00000011227	SNRNP200	100	98.268	Dasypus_novemcinctus
ENSNGAG00000021993	Snrnp200	100	97.242	ENSDORG00000005861	Snrnp200	100	97.242	Dipodomys_ordii
ENSNGAG00000021993	Snrnp200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSNGAG00000021993	Snrnp200	95	99.655	ENSETEG00000000162	SNRNP200	74	99.655	Echinops_telfairi
ENSNGAG00000021993	Snrnp200	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSNGAG00000021993	Snrnp200	100	98.741	ENSEASG00005001884	SNRNP200	100	98.741	Equus_asinus_asinus
ENSNGAG00000021993	Snrnp200	100	99.860	ENSECAG00000019675	SNRNP200	100	99.860	Equus_caballus
ENSNGAG00000021993	Snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSNGAG00000021993	Snrnp200	99	90.841	ENSELUG00000018948	snrnp200	99	90.730	Esox_lucius
ENSNGAG00000021993	Snrnp200	100	99.906	ENSFCAG00000010699	SNRNP200	100	99.906	Felis_catus
ENSNGAG00000021993	Snrnp200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSNGAG00000021993	Snrnp200	100	99.625	ENSFDAG00000004683	SNRNP200	100	99.625	Fukomys_damarensis
ENSNGAG00000021993	Snrnp200	100	87.781	ENSFHEG00000003786	snrnp200	99	87.781	Fundulus_heteroclitus
ENSNGAG00000021993	Snrnp200	100	89.673	ENSGMOG00000004881	snrnp200	99	89.626	Gadus_morhua
ENSNGAG00000021993	Snrnp200	100	88.015	ENSGAFG00000010807	snrnp200	99	88.015	Gambusia_affinis
ENSNGAG00000021993	Snrnp200	100	90.005	ENSGACG00000011474	snrnp200	99	89.911	Gasterosteus_aculeatus
ENSNGAG00000021993	Snrnp200	95	97.686	ENSGAGG00000016069	SNRNP200	99	97.686	Gopherus_agassizii
ENSNGAG00000021993	Snrnp200	100	99.906	ENSGGOG00000005174	SNRNP200	100	99.906	Gorilla_gorilla
ENSNGAG00000021993	Snrnp200	97	87.780	ENSHBUG00000011322	snrnp200	99	87.827	Haplochromis_burtoni
ENSNGAG00000021993	Snrnp200	100	99.719	ENSHGLG00000006654	SNRNP200	100	99.719	Heterocephalus_glaber_female
ENSNGAG00000021993	Snrnp200	100	99.719	ENSHGLG00100018594	SNRNP200	100	99.719	Heterocephalus_glaber_male
ENSNGAG00000021993	Snrnp200	100	99.860	ENSSTOG00000016351	SNRNP200	100	99.860	Ictidomys_tridecemlineatus
ENSNGAG00000021993	Snrnp200	100	99.766	ENSJJAG00000023659	Snrnp200	100	99.766	Jaculus_jaculus
ENSNGAG00000021993	Snrnp200	100	87.541	ENSKMAG00000003665	snrnp200	99	87.541	Kryptolebias_marmoratus
ENSNGAG00000021993	Snrnp200	100	90.262	ENSLBEG00000021585	snrnp200	99	90.262	Labrus_bergylta
ENSNGAG00000021993	Snrnp200	82	94.722	ENSLACG00000000226	SNRNP200	99	94.722	Latimeria_chalumnae
ENSNGAG00000021993	Snrnp200	100	92.182	ENSLOCG00000015198	snrnp200	99	92.182	Lepisosteus_oculatus
ENSNGAG00000021993	Snrnp200	100	99.485	ENSLAFG00000015626	SNRNP200	100	99.485	Loxodonta_africana
ENSNGAG00000021993	Snrnp200	100	99.860	ENSMFAG00000040174	SNRNP200	100	99.860	Macaca_fascicularis
ENSNGAG00000021993	Snrnp200	100	99.860	ENSMMUG00000023261	SNRNP200	100	99.860	Macaca_mulatta
ENSNGAG00000021993	Snrnp200	100	99.813	ENSMNEG00000032398	SNRNP200	100	99.813	Macaca_nemestrina
ENSNGAG00000021993	Snrnp200	100	99.906	ENSMLEG00000019083	SNRNP200	100	99.906	Mandrillus_leucophaeus
ENSNGAG00000021993	Snrnp200	100	90.220	ENSMAMG00000007851	snrnp200	99	90.173	Mastacembelus_armatus
ENSNGAG00000021993	Snrnp200	97	87.780	ENSMZEG00005010787	snrnp200	99	87.827	Maylandia_zebra
ENSNGAG00000021993	Snrnp200	97	97.242	ENSMGAG00000001831	SNRNP200	100	97.242	Meleagris_gallopavo
ENSNGAG00000021993	Snrnp200	100	99.906	ENSMAUG00000011825	Snrnp200	100	99.906	Mesocricetus_auratus
ENSNGAG00000021993	Snrnp200	100	99.860	ENSMICG00000004710	SNRNP200	100	99.860	Microcebus_murinus
ENSNGAG00000021993	Snrnp200	100	97.331	ENSMOCG00000011814	Snrnp200	100	97.331	Microtus_ochrogaster
ENSNGAG00000021993	Snrnp200	99	89.009	ENSMMOG00000014167	snrnp200	99	88.904	Mola_mola
ENSNGAG00000021993	Snrnp200	100	98.970	ENSMODG00000008475	SNRNP200	100	98.970	Monodelphis_domestica
ENSNGAG00000021993	Snrnp200	99	90.794	ENSMALG00000001973	snrnp200	99	90.684	Monopterus_albus
ENSNGAG00000021993	Snrnp200	100	99.719	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.719	Mus_caroli
ENSNGAG00000021993	Snrnp200	100	99.766	ENSMUSG00000003660	Snrnp200	100	99.766	Mus_musculus
ENSNGAG00000021993	Snrnp200	100	99.813	MGP_PahariEiJ_G0025695	Snrnp200	100	99.813	Mus_pahari
ENSNGAG00000021993	Snrnp200	100	99.766	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.766	Mus_spretus
ENSNGAG00000021993	Snrnp200	100	99.813	ENSMPUG00000008949	SNRNP200	100	99.813	Mustela_putorius_furo
ENSNGAG00000021993	Snrnp200	100	99.158	ENSMLUG00000010493	SNRNP200	100	99.158	Myotis_lucifugus
ENSNGAG00000021993	Snrnp200	100	95.459	ENSMLUG00000027511	-	100	95.459	Myotis_lucifugus
ENSNGAG00000021993	Snrnp200	90	90.319	ENSNBRG00000017960	snrnp200	98	90.319	Neolamprologus_brichardi
ENSNGAG00000021993	Snrnp200	100	95.258	ENSNLEG00000000025	SNRNP200	100	95.441	Nomascus_leucogenys
ENSNGAG00000021993	Snrnp200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSNGAG00000021993	Snrnp200	100	95.974	ENSOPRG00000015464	SNRNP200	100	95.974	Ochotona_princeps
ENSNGAG00000021993	Snrnp200	100	99.579	ENSODEG00000008366	SNRNP200	100	99.579	Octodon_degus
ENSNGAG00000021993	Snrnp200	99	90.512	ENSONIG00000010714	snrnp200	99	90.403	Oreochromis_niloticus
ENSNGAG00000021993	Snrnp200	100	99.766	ENSOCUG00000009864	SNRNP200	100	99.766	Oryctolagus_cuniculus
ENSNGAG00000021993	Snrnp200	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSNGAG00000021993	Snrnp200	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSNGAG00000021993	Snrnp200	100	90.309	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSNGAG00000021993	Snrnp200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSNGAG00000021993	Snrnp200	100	99.906	ENSOGAG00000006879	SNRNP200	100	99.906	Otolemur_garnettii
ENSNGAG00000021993	Snrnp200	100	98.456	ENSOARG00000013949	SNRNP200	100	98.456	Ovis_aries
ENSNGAG00000021993	Snrnp200	100	99.906	ENSPPAG00000041559	SNRNP200	100	99.906	Pan_paniscus
ENSNGAG00000021993	Snrnp200	100	99.906	ENSPPRG00000004435	SNRNP200	100	99.906	Panthera_pardus
ENSNGAG00000021993	Snrnp200	100	99.438	ENSPTIG00000006380	SNRNP200	100	99.438	Panthera_tigris_altaica
ENSNGAG00000021993	Snrnp200	100	99.906	ENSPTRG00000012230	SNRNP200	100	99.906	Pan_troglodytes
ENSNGAG00000021993	Snrnp200	100	99.860	ENSPANG00000006017	SNRNP200	100	99.860	Papio_anubis
ENSNGAG00000021993	Snrnp200	100	91.105	ENSPKIG00000014762	snrnp200	99	91.105	Paramormyrops_kingsleyae
ENSNGAG00000021993	Snrnp200	100	96.724	ENSPSIG00000008580	SNRNP200	100	96.724	Pelodiscus_sinensis
ENSNGAG00000021993	Snrnp200	100	98.970	ENSPCIG00000023050	SNRNP200	100	98.970	Phascolarctos_cinereus
ENSNGAG00000021993	Snrnp200	100	90.360	ENSPFOG00000015110	snrnp200	99	90.360	Poecilia_formosa
ENSNGAG00000021993	Snrnp200	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSNGAG00000021993	Snrnp200	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSNGAG00000021993	Snrnp200	100	90.449	ENSPREG00000008875	snrnp200	99	90.449	Poecilia_reticulata
ENSNGAG00000021993	Snrnp200	100	99.906	ENSPPYG00000012068	SNRNP200	100	99.906	Pongo_abelii
ENSNGAG00000021993	Snrnp200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSNGAG00000021993	Snrnp200	100	99.906	ENSPCOG00000024608	SNRNP200	100	99.906	Propithecus_coquereli
ENSNGAG00000021993	Snrnp200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSNGAG00000021993	Snrnp200	99	85.995	ENSPNYG00000017476	snrnp200	99	85.901	Pundamilia_nyererei
ENSNGAG00000021993	Snrnp200	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSNGAG00000021993	Snrnp200	100	99.906	ENSRNOG00000012157	Snrnp200	100	99.906	Rattus_norvegicus
ENSNGAG00000021993	Snrnp200	100	99.906	ENSRBIG00000044690	-	100	99.906	Rhinopithecus_bieti
ENSNGAG00000021993	Snrnp200	100	99.906	ENSRROG00000037952	-	100	99.906	Rhinopithecus_roxellana
ENSNGAG00000021993	Snrnp200	100	99.860	ENSSBOG00000035471	SNRNP200	100	99.860	Saimiri_boliviensis_boliviensis
ENSNGAG00000021993	Snrnp200	97	98.887	ENSSHAG00000000758	SNRNP200	100	98.887	Sarcophilus_harrisii
ENSNGAG00000021993	Snrnp200	99	91.686	ENSSFOG00015018826	snrnp200	99	91.573	Scleropages_formosus
ENSNGAG00000021993	Snrnp200	99	90.465	ENSSMAG00000005463	snrnp200	99	90.356	Scophthalmus_maximus
ENSNGAG00000021993	Snrnp200	99	90.747	ENSSDUG00000021410	snrnp200	99	90.637	Seriola_dumerili
ENSNGAG00000021993	Snrnp200	99	90.700	ENSSLDG00000010884	snrnp200	99	90.590	Seriola_lalandi_dorsalis
ENSNGAG00000021993	Snrnp200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSNGAG00000021993	Snrnp200	100	97.519	ENSSPUG00000003726	-	100	97.519	Sphenodon_punctatus
ENSNGAG00000021993	Snrnp200	99	90.794	ENSSPAG00000001842	snrnp200	99	90.684	Stegastes_partitus
ENSNGAG00000021993	Snrnp200	100	99.719	ENSSSCG00000008127	SNRNP200	100	99.719	Sus_scrofa
ENSNGAG00000021993	Snrnp200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSNGAG00000021993	Snrnp200	99	90.418	ENSTRUG00000001307	snrnp200	99	90.309	Takifugu_rubripes
ENSNGAG00000021993	Snrnp200	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSNGAG00000021993	Snrnp200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSNGAG00000021993	Snrnp200	100	99.532	ENSTTRG00000004983	SNRNP200	100	99.532	Tursiops_truncatus
ENSNGAG00000021993	Snrnp200	75	92.926	ENSUAMG00000008395	-	95	92.926	Ursus_americanus
ENSNGAG00000021993	Snrnp200	100	99.906	ENSUMAG00000012385	SNRNP200	100	99.906	Ursus_maritimus
ENSNGAG00000021993	Snrnp200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSNGAG00000021993	Snrnp200	100	99.673	ENSVVUG00000026247	SNRNP200	100	99.673	Vulpes_vulpes
ENSNGAG00000021993	Snrnp200	100	94.343	ENSXETG00000001243	snrnp200	100	94.343	Xenopus_tropicalis
ENSNGAG00000021993	Snrnp200	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus