EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000022033 (Gene tree)
Gene ID: 103733202
Gene Symbol: Exosc1
Alias: 2610035C18Rik|2610104C07Rik|2610312F07Rik
Full Name: exosome component 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 10309 bases
Position: chrKL200506.1:2547067-2557375
Accession: 103733202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000023475	EXOSC1	PF10447.9	8.9e-15	1	1
ENSNGAP00000023475	ECR1_N	PF14382.6	8.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000029173	-	719	XM_008831982	ENSNGAP00000023475	195 (aa)	XP_008830204	-

Gene Model

Click here to download ENSNGAG00000022033's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000022033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000022033	Exosc1	100	94.872	ENSG00000171311	EXOSC1	100	94.872	Homo_sapiens
ENSNGAG00000022033	Exosc1	98	77.487	ENSAPOG00000007822	exosc1	98	77.487	Acanthochromis_polyacanthus
ENSNGAG00000022033	Exosc1	100	96.410	ENSAMEG00000000129	EXOSC1	100	96.410	Ailuropoda_melanoleuca
ENSNGAG00000022033	Exosc1	96	77.128	ENSACIG00000018956	exosc1	92	77.128	Amphilophus_citrinellus
ENSNGAG00000022033	Exosc1	98	77.487	ENSAOCG00000010699	exosc1	98	77.487	Amphiprion_ocellaris
ENSNGAG00000022033	Exosc1	92	68.156	ENSAPEG00000012690	exosc1	96	68.156	Amphiprion_percula
ENSNGAG00000022033	Exosc1	98	76.963	ENSATEG00000018683	exosc1	98	76.963	Anabas_testudineus
ENSNGAG00000022033	Exosc1	99	84.456	ENSACAG00000002101	EXOSC1	99	84.456	Anolis_carolinensis
ENSNGAG00000022033	Exosc1	100	96.410	ENSANAG00000034669	EXOSC1	100	96.410	Aotus_nancymaae
ENSNGAG00000022033	Exosc1	98	77.487	ENSACLG00000021243	exosc1	98	77.487	Astatotilapia_calliptera
ENSNGAG00000022033	Exosc1	98	79.058	ENSAMXG00000011116	exosc1	98	79.058	Astyanax_mexicanus
ENSNGAG00000022033	Exosc1	100	96.923	ENSBTAG00000012699	EXOSC1	100	96.923	Bos_taurus
ENSNGAG00000022033	Exosc1	92	32.447	WBGene00012966	exos-1	90	32.447	Caenorhabditis_elegans
ENSNGAG00000022033	Exosc1	100	96.923	ENSCJAG00000016586	EXOSC1	100	96.923	Callithrix_jacchus
ENSNGAG00000022033	Exosc1	100	95.897	ENSCAFG00000009068	EXOSC1	94	95.897	Canis_familiaris
ENSNGAG00000022033	Exosc1	100	95.897	ENSCAFG00020006002	EXOSC1	94	95.897	Canis_lupus_dingo
ENSNGAG00000022033	Exosc1	100	96.923	ENSCHIG00000015253	EXOSC1	100	96.923	Capra_hircus
ENSNGAG00000022033	Exosc1	100	96.410	ENSTSYG00000000760	EXOSC1	100	96.410	Carlito_syrichta
ENSNGAG00000022033	Exosc1	100	96.410	ENSCPOG00000001173	EXOSC1	100	96.410	Cavia_porcellus
ENSNGAG00000022033	Exosc1	100	54.822	ENSCCAG00000023986	EXOSC1	100	54.822	Cebus_capucinus
ENSNGAG00000022033	Exosc1	100	94.872	ENSCATG00000034114	EXOSC1	100	94.872	Cercocebus_atys
ENSNGAG00000022033	Exosc1	100	96.923	ENSCLAG00000002463	EXOSC1	100	96.923	Chinchilla_lanigera
ENSNGAG00000022033	Exosc1	100	94.359	ENSCSAG00000005870	EXOSC1	100	94.359	Chlorocebus_sabaeus
ENSNGAG00000022033	Exosc1	96	82.353	ENSCHOG00000006477	EXOSC1	100	82.353	Choloepus_hoffmanni
ENSNGAG00000022033	Exosc1	54	83.962	ENSCPBG00000011949	EXOSC1	88	83.962	Chrysemys_picta_bellii
ENSNGAG00000022033	Exosc1	95	54.545	ENSCING00000022734	-	89	54.545	Ciona_intestinalis
ENSNGAG00000022033	Exosc1	95	56.150	ENSCSAVG00000010865	-	95	56.150	Ciona_savignyi
ENSNGAG00000022033	Exosc1	100	94.872	ENSCANG00000034159	EXOSC1	100	94.872	Colobus_angolensis_palliatus
ENSNGAG00000022033	Exosc1	100	97.949	ENSCGRG00001000335	Exosc1	100	97.949	Cricetulus_griseus_chok1gshd
ENSNGAG00000022033	Exosc1	100	97.949	ENSCGRG00000011602	Exosc1	100	97.949	Cricetulus_griseus_crigri
ENSNGAG00000022033	Exosc1	98	65.969	ENSCSEG00000007895	exosc1	95	65.969	Cynoglossus_semilaevis
ENSNGAG00000022033	Exosc1	98	73.822	ENSCVAG00000016748	exosc1	98	73.822	Cyprinodon_variegatus
ENSNGAG00000022033	Exosc1	98	78.010	ENSDARG00000059841	exosc1	98	78.010	Danio_rerio
ENSNGAG00000022033	Exosc1	75	95.270	ENSDNOG00000007983	EXOSC1	100	95.270	Dasypus_novemcinctus
ENSNGAG00000022033	Exosc1	100	96.410	ENSDORG00000016528	Exosc1	100	96.410	Dipodomys_ordii
ENSNGAG00000022033	Exosc1	94	47.619	FBgn0032346	Csl4	92	47.619	Drosophila_melanogaster
ENSNGAG00000022033	Exosc1	100	95.385	ENSETEG00000002469	-	100	95.385	Echinops_telfairi
ENSNGAG00000022033	Exosc1	99	63.776	ENSEBUG00000008164	exosc1	98	63.776	Eptatretus_burgeri
ENSNGAG00000022033	Exosc1	100	86.667	ENSEASG00005008684	EXOSC1	100	86.667	Equus_asinus_asinus
ENSNGAG00000022033	Exosc1	61	75.630	ENSECAG00000010621	EXOSC1	71	75.630	Equus_caballus
ENSNGAG00000022033	Exosc1	100	95.385	ENSEEUG00000005647	EXOSC1	100	95.385	Erinaceus_europaeus
ENSNGAG00000022033	Exosc1	94	78.261	ENSELUG00000017369	exosc1	97	62.500	Esox_lucius
ENSNGAG00000022033	Exosc1	100	96.410	ENSFCAG00000040563	EXOSC1	94	96.410	Felis_catus
ENSNGAG00000022033	Exosc1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSNGAG00000022033	Exosc1	100	96.410	ENSFDAG00000000846	EXOSC1	100	96.410	Fukomys_damarensis
ENSNGAG00000022033	Exosc1	98	73.822	ENSFHEG00000009154	exosc1	98	73.822	Fundulus_heteroclitus
ENSNGAG00000022033	Exosc1	98	77.487	ENSGMOG00000008993	exosc1	98	77.487	Gadus_morhua
ENSNGAG00000022033	Exosc1	100	72.308	ENSGALG00000039917	EXOSC1	100	86.986	Gallus_gallus
ENSNGAG00000022033	Exosc1	98	74.346	ENSGAFG00000010265	exosc1	94	74.346	Gambusia_affinis
ENSNGAG00000022033	Exosc1	98	77.487	ENSGACG00000018936	exosc1	98	77.487	Gasterosteus_aculeatus
ENSNGAG00000022033	Exosc1	100	86.154	ENSGAGG00000019192	EXOSC1	100	86.154	Gopherus_agassizii
ENSNGAG00000022033	Exosc1	100	83.590	ENSGGOG00000003099	EXOSC1	100	83.590	Gorilla_gorilla
ENSNGAG00000022033	Exosc1	98	77.487	ENSHBUG00000017857	exosc1	98	77.487	Haplochromis_burtoni
ENSNGAG00000022033	Exosc1	100	95.897	ENSHGLG00000016927	EXOSC1	100	95.897	Heterocephalus_glaber_female
ENSNGAG00000022033	Exosc1	100	95.897	ENSHGLG00100012208	EXOSC1	100	95.897	Heterocephalus_glaber_male
ENSNGAG00000022033	Exosc1	98	76.440	ENSHCOG00000019882	exosc1	98	76.440	Hippocampus_comes
ENSNGAG00000022033	Exosc1	98	79.058	ENSIPUG00000007685	exosc1	98	79.058	Ictalurus_punctatus
ENSNGAG00000022033	Exosc1	100	96.410	ENSSTOG00000006615	EXOSC1	100	96.410	Ictidomys_tridecemlineatus
ENSNGAG00000022033	Exosc1	63	79.508	ENSSTOG00000029860	-	93	79.508	Ictidomys_tridecemlineatus
ENSNGAG00000022033	Exosc1	100	97.436	ENSJJAG00000013311	Exosc1	100	97.436	Jaculus_jaculus
ENSNGAG00000022033	Exosc1	98	75.521	ENSKMAG00000001202	exosc1	81	75.521	Kryptolebias_marmoratus
ENSNGAG00000022033	Exosc1	98	76.963	ENSLBEG00000011448	exosc1	98	76.963	Labrus_bergylta
ENSNGAG00000022033	Exosc1	98	58.081	ENSLOCG00000003776	exosc1	99	58.081	Lepisosteus_oculatus
ENSNGAG00000022033	Exosc1	100	96.410	ENSLAFG00000015983	EXOSC1	100	96.410	Loxodonta_africana
ENSNGAG00000022033	Exosc1	100	94.872	ENSMFAG00000001493	EXOSC1	100	94.872	Macaca_fascicularis
ENSNGAG00000022033	Exosc1	100	94.872	ENSMMUG00000020028	EXOSC1	100	88.442	Macaca_mulatta
ENSNGAG00000022033	Exosc1	100	94.872	ENSMNEG00000029816	EXOSC1	100	94.872	Macaca_nemestrina
ENSNGAG00000022033	Exosc1	100	89.744	ENSMLEG00000027643	EXOSC1	100	89.744	Mandrillus_leucophaeus
ENSNGAG00000022033	Exosc1	98	78.010	ENSMAMG00000012200	exosc1	98	78.010	Mastacembelus_armatus
ENSNGAG00000022033	Exosc1	98	77.487	ENSMZEG00005007042	exosc1	98	77.487	Maylandia_zebra
ENSNGAG00000022033	Exosc1	100	85.641	ENSMAUG00000020462	-	100	85.641	Mesocricetus_auratus
ENSNGAG00000022033	Exosc1	100	95.897	ENSMICG00000007664	EXOSC1	92	95.897	Microcebus_murinus
ENSNGAG00000022033	Exosc1	100	97.949	ENSMOCG00000006004	-	100	97.949	Microtus_ochrogaster
ENSNGAG00000022033	Exosc1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSNGAG00000022033	Exosc1	99	58.763	ENSMMOG00000021403	exosc1	99	58.763	Mola_mola
ENSNGAG00000022033	Exosc1	100	90.816	ENSMODG00000004213	EXOSC1	100	90.816	Monodelphis_domestica
ENSNGAG00000022033	Exosc1	94	78.261	ENSMALG00000007061	exosc1	92	78.261	Monopterus_albus
ENSNGAG00000022033	Exosc1	100	97.436	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.436	Mus_caroli
ENSNGAG00000022033	Exosc1	100	96.923	ENSMUSG00000034321	Exosc1	100	96.923	Mus_musculus
ENSNGAG00000022033	Exosc1	100	97.949	MGP_PahariEiJ_G0014449	Exosc1	100	97.949	Mus_pahari
ENSNGAG00000022033	Exosc1	100	97.436	MGP_SPRETEiJ_G0023880	Exosc1	100	97.436	Mus_spretus
ENSNGAG00000022033	Exosc1	100	96.410	ENSMPUG00000017044	EXOSC1	100	96.410	Mustela_putorius_furo
ENSNGAG00000022033	Exosc1	100	95.897	ENSMLUG00000009228	EXOSC1	100	95.897	Myotis_lucifugus
ENSNGAG00000022033	Exosc1	98	59.162	ENSNBRG00000024007	exosc1	97	59.162	Neolamprologus_brichardi
ENSNGAG00000022033	Exosc1	100	94.359	ENSNLEG00000013872	EXOSC1	100	94.359	Nomascus_leucogenys
ENSNGAG00000022033	Exosc1	59	87.826	ENSMEUG00000002246	EXOSC1	100	87.826	Notamacropus_eugenii
ENSNGAG00000022033	Exosc1	100	96.410	ENSOPRG00000005065	EXOSC1	100	96.410	Ochotona_princeps
ENSNGAG00000022033	Exosc1	100	96.410	ENSODEG00000016709	EXOSC1	100	96.410	Octodon_degus
ENSNGAG00000022033	Exosc1	98	77.487	ENSONIG00000017683	exosc1	98	77.487	Oreochromis_niloticus
ENSNGAG00000022033	Exosc1	59	92.174	ENSOANG00000006563	EXOSC1	98	90.323	Ornithorhynchus_anatinus
ENSNGAG00000022033	Exosc1	100	95.918	ENSOCUG00000011898	-	100	95.918	Oryctolagus_cuniculus
ENSNGAG00000022033	Exosc1	100	90.769	ENSOCUG00000026461	-	100	90.769	Oryctolagus_cuniculus
ENSNGAG00000022033	Exosc1	98	76.042	ENSORLG00000011595	exosc1	98	76.042	Oryzias_latipes
ENSNGAG00000022033	Exosc1	98	76.042	ENSORLG00020005831	exosc1	98	76.042	Oryzias_latipes_hni
ENSNGAG00000022033	Exosc1	98	76.042	ENSORLG00015004317	exosc1	98	76.042	Oryzias_latipes_hsok
ENSNGAG00000022033	Exosc1	98	61.780	ENSOMEG00000013907	exosc1	98	61.780	Oryzias_melastigma
ENSNGAG00000022033	Exosc1	100	96.410	ENSOGAG00000016259	EXOSC1	100	96.410	Otolemur_garnettii
ENSNGAG00000022033	Exosc1	100	96.410	ENSOARG00000010136	EXOSC1	100	96.410	Ovis_aries
ENSNGAG00000022033	Exosc1	100	89.394	ENSPPAG00000039842	EXOSC1	100	89.394	Pan_paniscus
ENSNGAG00000022033	Exosc1	100	96.410	ENSPPRG00000023366	EXOSC1	100	96.410	Panthera_pardus
ENSNGAG00000022033	Exosc1	100	96.410	ENSPTIG00000017701	EXOSC1	100	96.410	Panthera_tigris_altaica
ENSNGAG00000022033	Exosc1	100	94.872	ENSPTRG00000002808	EXOSC1	100	94.872	Pan_troglodytes
ENSNGAG00000022033	Exosc1	100	94.872	ENSPANG00000021324	EXOSC1	100	94.872	Papio_anubis
ENSNGAG00000022033	Exosc1	98	78.534	ENSPKIG00000016037	exosc1	98	78.534	Paramormyrops_kingsleyae
ENSNGAG00000022033	Exosc1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.967	Pelodiscus_sinensis
ENSNGAG00000022033	Exosc1	98	67.016	ENSPMGG00000014002	exosc1	98	67.016	Periophthalmus_magnuspinnatus
ENSNGAG00000022033	Exosc1	100	97.949	ENSPEMG00000010710	-	100	97.949	Peromyscus_maniculatus_bairdii
ENSNGAG00000022033	Exosc1	95	69.519	ENSPMAG00000000195	exosc1	95	69.519	Petromyzon_marinus
ENSNGAG00000022033	Exosc1	100	91.795	ENSPCIG00000002210	EXOSC1	99	91.795	Phascolarctos_cinereus
ENSNGAG00000022033	Exosc1	98	73.822	ENSPFOG00000006755	exosc1	94	73.822	Poecilia_formosa
ENSNGAG00000022033	Exosc1	98	73.822	ENSPLAG00000005880	exosc1	98	73.822	Poecilia_latipinna
ENSNGAG00000022033	Exosc1	98	73.822	ENSPMEG00000015598	exosc1	94	73.822	Poecilia_mexicana
ENSNGAG00000022033	Exosc1	98	64.583	ENSPREG00000000405	exosc1	93	64.583	Poecilia_reticulata
ENSNGAG00000022033	Exosc1	100	94.359	ENSPPYG00000002531	EXOSC1	100	94.359	Pongo_abelii
ENSNGAG00000022033	Exosc1	100	96.410	ENSPCAG00000009135	EXOSC1	100	96.410	Procavia_capensis
ENSNGAG00000022033	Exosc1	100	90.256	ENSPCOG00000027539	EXOSC1	100	90.256	Propithecus_coquereli
ENSNGAG00000022033	Exosc1	100	96.410	ENSPVAG00000003372	EXOSC1	100	96.410	Pteropus_vampyrus
ENSNGAG00000022033	Exosc1	98	77.487	ENSPNYG00000021745	exosc1	98	77.487	Pundamilia_nyererei
ENSNGAG00000022033	Exosc1	98	78.010	ENSPNAG00000001944	exosc1	98	78.010	Pygocentrus_nattereri
ENSNGAG00000022033	Exosc1	100	97.949	ENSRNOG00000048708	Exosc1	100	97.949	Rattus_norvegicus
ENSNGAG00000022033	Exosc1	100	94.872	ENSRBIG00000035618	EXOSC1	100	94.872	Rhinopithecus_bieti
ENSNGAG00000022033	Exosc1	100	94.872	ENSRROG00000032589	EXOSC1	92	94.872	Rhinopithecus_roxellana
ENSNGAG00000022033	Exosc1	100	96.410	ENSSBOG00000000359	EXOSC1	100	96.410	Saimiri_boliviensis_boliviensis
ENSNGAG00000022033	Exosc1	75	93.878	ENSSHAG00000018219	EXOSC1	100	93.878	Sarcophilus_harrisii
ENSNGAG00000022033	Exosc1	98	79.688	ENSSFOG00015009069	exosc1	99	79.688	Scleropages_formosus
ENSNGAG00000022033	Exosc1	97	75.263	ENSSFOG00015016289	-	98	75.263	Scleropages_formosus
ENSNGAG00000022033	Exosc1	98	78.010	ENSSMAG00000003721	exosc1	98	78.010	Scophthalmus_maximus
ENSNGAG00000022033	Exosc1	98	78.010	ENSSDUG00000002993	exosc1	98	78.010	Seriola_dumerili
ENSNGAG00000022033	Exosc1	98	78.010	ENSSLDG00000025181	exosc1	98	78.010	Seriola_lalandi_dorsalis
ENSNGAG00000022033	Exosc1	100	82.564	ENSSARG00000000162	EXOSC1	100	82.564	Sorex_araneus
ENSNGAG00000022033	Exosc1	99	83.505	ENSSPUG00000012263	EXOSC1	99	83.505	Sphenodon_punctatus
ENSNGAG00000022033	Exosc1	98	69.110	ENSSPAG00000016792	exosc1	82	69.110	Stegastes_partitus
ENSNGAG00000022033	Exosc1	100	95.385	ENSSSCG00000010518	EXOSC1	91	95.385	Sus_scrofa
ENSNGAG00000022033	Exosc1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSNGAG00000022033	Exosc1	97	71.429	ENSTRUG00000007706	exosc1	98	71.429	Takifugu_rubripes
ENSNGAG00000022033	Exosc1	97	71.354	ENSTNIG00000014079	exosc1	97	71.354	Tetraodon_nigroviridis
ENSNGAG00000022033	Exosc1	100	87.179	ENSTBEG00000006011	EXOSC1	100	87.179	Tupaia_belangeri
ENSNGAG00000022033	Exosc1	94	95.652	ENSTTRG00000009887	EXOSC1	100	95.652	Tursiops_truncatus
ENSNGAG00000022033	Exosc1	100	79.487	ENSUAMG00000010266	EXOSC1	100	79.487	Ursus_americanus
ENSNGAG00000022033	Exosc1	100	80.513	ENSUMAG00000022002	EXOSC1	100	80.513	Ursus_maritimus
ENSNGAG00000022033	Exosc1	100	95.897	ENSVVUG00000023192	EXOSC1	63	95.897	Vulpes_vulpes
ENSNGAG00000022033	Exosc1	98	79.688	ENSXETG00000003434	exosc1	99	79.688	Xenopus_tropicalis
ENSNGAG00000022033	Exosc1	62	83.333	ENSXCOG00000014499	exosc1	92	83.333	Xiphophorus_couchianus
ENSNGAG00000022033	Exosc1	98	65.104	ENSXMAG00000023382	exosc1	93	65.104	Xiphophorus_maculatus