EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000023097 (Gene tree)
Gene ID: 103740663
Gene Symbol: Crnkl1
Alias: 1200013P10Rik|5730590A01Rik|crn
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 16155 bases
Position: chrKL198962.1:2064361-2080515
Accession: 103740663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000025019	HAT	PF02184.16	3.3e-35	1	2
ENSNGAP00000025019	HAT	PF02184.16	3.3e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000030734	-	2103	XM_008841339	ENSNGAP00000025019	700 (aa)	XP_008839561	-

Gene Model

Click here to download ENSNGAG00000023097's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023097	Crnkl1	100	94.286	ENSG00000101343	CRNKL1	100	94.286	Homo_sapiens
ENSNGAG00000023097	Crnkl1	99	83.954	ENSAPOG00000009705	crnkl1	97	84.012	Acanthochromis_polyacanthus
ENSNGAG00000023097	Crnkl1	100	96.143	ENSAMEG00000000270	CRNKL1	83	96.143	Ailuropoda_melanoleuca
ENSNGAG00000023097	Crnkl1	98	83.988	ENSACIG00000015267	crnkl1	89	83.988	Amphilophus_citrinellus
ENSNGAG00000023097	Crnkl1	99	84.097	ENSAOCG00000021964	crnkl1	91	84.097	Amphiprion_ocellaris
ENSNGAG00000023097	Crnkl1	99	83.954	ENSAPEG00000015041	crnkl1	91	83.954	Amphiprion_percula
ENSNGAG00000023097	Crnkl1	99	84.538	ENSATEG00000001068	crnkl1	89	84.538	Anabas_testudineus
ENSNGAG00000023097	Crnkl1	99	88.269	ENSAPLG00000013105	CRNKL1	99	88.269	Anas_platyrhynchos
ENSNGAG00000023097	Crnkl1	99	90.661	ENSACAG00000005284	CRNKL1	99	90.661	Anolis_carolinensis
ENSNGAG00000023097	Crnkl1	92	94.729	ENSANAG00000024889	CRNKL1	100	94.729	Aotus_nancymaae
ENSNGAG00000023097	Crnkl1	99	85.362	ENSACLG00000010813	crnkl1	90	85.362	Astatotilapia_calliptera
ENSNGAG00000023097	Crnkl1	97	85.377	ENSAMXG00000018334	crnkl1	92	83.524	Astyanax_mexicanus
ENSNGAG00000023097	Crnkl1	100	95.000	ENSBTAG00000008472	CRNKL1	99	95.000	Bos_taurus
ENSNGAG00000023097	Crnkl1	93	61.433	WBGene00019762	M03F8.3	91	60.750	Caenorhabditis_elegans
ENSNGAG00000023097	Crnkl1	100	94.429	ENSCJAG00000005393	CRNKL1	100	94.429	Callithrix_jacchus
ENSNGAG00000023097	Crnkl1	100	95.857	ENSCAFG00000005333	CRNKL1	94	95.857	Canis_familiaris
ENSNGAG00000023097	Crnkl1	100	95.857	ENSCAFG00020027488	CRNKL1	100	95.857	Canis_lupus_dingo
ENSNGAG00000023097	Crnkl1	100	94.026	ENSCHIG00000013171	CRNKL1	99	94.026	Capra_hircus
ENSNGAG00000023097	Crnkl1	100	95.000	ENSTSYG00000004197	CRNKL1	100	95.000	Carlito_syrichta
ENSNGAG00000023097	Crnkl1	96	94.778	ENSCAPG00000010501	CRNKL1	99	94.778	Cavia_aperea
ENSNGAG00000023097	Crnkl1	100	95.143	ENSCPOG00000004418	CRNKL1	100	95.143	Cavia_porcellus
ENSNGAG00000023097	Crnkl1	100	94.429	ENSCCAG00000027037	CRNKL1	100	94.429	Cebus_capucinus
ENSNGAG00000023097	Crnkl1	100	94.571	ENSCATG00000034247	CRNKL1	100	94.571	Cercocebus_atys
ENSNGAG00000023097	Crnkl1	100	95.571	ENSCLAG00000013859	CRNKL1	100	95.571	Chinchilla_lanigera
ENSNGAG00000023097	Crnkl1	100	94.571	ENSCSAG00000011434	CRNKL1	100	94.571	Chlorocebus_sabaeus
ENSNGAG00000023097	Crnkl1	100	95.429	ENSCHOG00000006371	CRNKL1	84	95.429	Choloepus_hoffmanni
ENSNGAG00000023097	Crnkl1	99	91.691	ENSCPBG00000023501	CRNKL1	99	91.691	Chrysemys_picta_bellii
ENSNGAG00000023097	Crnkl1	96	68.000	ENSCING00000002709	-	99	66.428	Ciona_intestinalis
ENSNGAG00000023097	Crnkl1	100	94.429	ENSCANG00000038789	CRNKL1	100	94.429	Colobus_angolensis_palliatus
ENSNGAG00000023097	Crnkl1	100	96.000	ENSCGRG00001001115	-	99	96.000	Cricetulus_griseus_chok1gshd
ENSNGAG00000023097	Crnkl1	100	96.000	ENSCGRG00001000687	-	99	96.000	Cricetulus_griseus_chok1gshd
ENSNGAG00000023097	Crnkl1	100	96.000	ENSCGRG00000007854	Crnkl1	99	96.000	Cricetulus_griseus_crigri
ENSNGAG00000023097	Crnkl1	98	83.721	ENSCSEG00000005594	crnkl1	86	83.721	Cynoglossus_semilaevis
ENSNGAG00000023097	Crnkl1	97	85.272	ENSCVAG00000015172	crnkl1	92	83.381	Cyprinodon_variegatus
ENSNGAG00000023097	Crnkl1	96	84.741	ENSDARG00000007901	crnkl1	90	83.501	Danio_rerio
ENSNGAG00000023097	Crnkl1	99	95.839	ENSDNOG00000016226	CRNKL1	95	95.839	Dasypus_novemcinctus
ENSNGAG00000023097	Crnkl1	97	85.944	ENSDORG00000030174	-	99	85.944	Dipodomys_ordii
ENSNGAG00000023097	Crnkl1	97	86.384	ENSDORG00000023724	-	99	86.384	Dipodomys_ordii
ENSNGAG00000023097	Crnkl1	100	96.148	ENSDORG00000000394	-	100	96.148	Dipodomys_ordii
ENSNGAG00000023097	Crnkl1	97	66.763	FBgn0000377	crn	97	66.284	Drosophila_melanogaster
ENSNGAG00000023097	Crnkl1	100	83.143	ENSETEG00000003711	CRNKL1	84	83.143	Echinops_telfairi
ENSNGAG00000023097	Crnkl1	99	59.339	ENSEBUG00000013461	crnkl1	96	53.736	Eptatretus_burgeri
ENSNGAG00000023097	Crnkl1	100	95.857	ENSEASG00005002072	CRNKL1	100	95.857	Equus_asinus_asinus
ENSNGAG00000023097	Crnkl1	100	95.857	ENSECAG00000022215	CRNKL1	100	95.857	Equus_caballus
ENSNGAG00000023097	Crnkl1	99	93.074	ENSEEUG00000000413	CRNKL1	92	93.143	Erinaceus_europaeus
ENSNGAG00000023097	Crnkl1	97	84.141	ENSELUG00000015424	crnkl1	97	82.783	Esox_lucius
ENSNGAG00000023097	Crnkl1	100	96.143	ENSFCAG00000000714	CRNKL1	100	96.143	Felis_catus
ENSNGAG00000023097	Crnkl1	98	89.620	ENSFALG00000004611	CRNKL1	100	89.620	Ficedula_albicollis
ENSNGAG00000023097	Crnkl1	100	95.571	ENSFDAG00000000604	CRNKL1	100	95.571	Fukomys_damarensis
ENSNGAG00000023097	Crnkl1	98	84.402	ENSFHEG00000013163	crnkl1	88	84.402	Fundulus_heteroclitus
ENSNGAG00000023097	Crnkl1	97	83.824	ENSGMOG00000007609	crnkl1	94	82.235	Gadus_morhua
ENSNGAG00000023097	Crnkl1	99	91.261	ENSGALG00000008429	CRNKL1	99	91.261	Gallus_gallus
ENSNGAG00000023097	Crnkl1	97	84.389	ENSGAFG00000014249	crnkl1	90	82.808	Gambusia_affinis
ENSNGAG00000023097	Crnkl1	99	82.471	ENSGACG00000011852	crnkl1	91	82.471	Gasterosteus_aculeatus
ENSNGAG00000023097	Crnkl1	96	90.135	ENSGAGG00000021233	CRNKL1	100	90.135	Gopherus_agassizii
ENSNGAG00000023097	Crnkl1	100	94.286	ENSGGOG00000014176	CRNKL1	100	94.286	Gorilla_gorilla
ENSNGAG00000023097	Crnkl1	99	85.217	ENSHBUG00000005246	crnkl1	90	85.217	Haplochromis_burtoni
ENSNGAG00000023097	Crnkl1	100	95.429	ENSHGLG00000010856	CRNKL1	100	95.429	Heterocephalus_glaber_female
ENSNGAG00000023097	Crnkl1	100	95.429	ENSHGLG00100011521	CRNKL1	100	95.429	Heterocephalus_glaber_male
ENSNGAG00000023097	Crnkl1	97	82.206	ENSHCOG00000006420	crnkl1	98	80.863	Hippocampus_comes
ENSNGAG00000023097	Crnkl1	97	73.894	ENSIPUG00000006836	-	99	73.149	Ictalurus_punctatus
ENSNGAG00000023097	Crnkl1	94	85.325	ENSIPUG00000006751	crnkl1	93	83.578	Ictalurus_punctatus
ENSNGAG00000023097	Crnkl1	93	66.769	ENSIPUG00000000315	-	100	67.951	Ictalurus_punctatus
ENSNGAG00000023097	Crnkl1	100	96.714	ENSSTOG00000014747	CRNKL1	100	96.714	Ictidomys_tridecemlineatus
ENSNGAG00000023097	Crnkl1	100	97.017	ENSJJAG00000016926	Crnkl1	100	97.017	Jaculus_jaculus
ENSNGAG00000023097	Crnkl1	99	84.029	ENSKMAG00000003620	crnkl1	86	84.029	Kryptolebias_marmoratus
ENSNGAG00000023097	Crnkl1	97	69.242	ENSLBEG00000003543	crnkl1	92	69.727	Labrus_bergylta
ENSNGAG00000023097	Crnkl1	99	85.776	ENSLACG00000001129	CRNKL1	99	85.776	Latimeria_chalumnae
ENSNGAG00000023097	Crnkl1	97	87.149	ENSLOCG00000016889	crnkl1	95	85.509	Lepisosteus_oculatus
ENSNGAG00000023097	Crnkl1	100	95.435	ENSLAFG00000004512	CRNKL1	100	95.435	Loxodonta_africana
ENSNGAG00000023097	Crnkl1	100	94.571	ENSMFAG00000039893	CRNKL1	100	94.571	Macaca_fascicularis
ENSNGAG00000023097	Crnkl1	100	94.571	ENSMMUG00000007709	CRNKL1	100	94.571	Macaca_mulatta
ENSNGAG00000023097	Crnkl1	100	94.571	ENSMNEG00000037490	CRNKL1	100	94.571	Macaca_nemestrina
ENSNGAG00000023097	Crnkl1	100	94.571	ENSMLEG00000034885	CRNKL1	100	94.571	Mandrillus_leucophaeus
ENSNGAG00000023097	Crnkl1	99	83.524	ENSMAMG00000008757	crnkl1	90	83.524	Mastacembelus_armatus
ENSNGAG00000023097	Crnkl1	99	85.362	ENSMZEG00005022345	crnkl1	90	85.362	Maylandia_zebra
ENSNGAG00000023097	Crnkl1	99	91.117	ENSMGAG00000003452	CRNKL1	94	91.117	Meleagris_gallopavo
ENSNGAG00000023097	Crnkl1	100	95.857	ENSMAUG00000020764	Crnkl1	99	95.857	Mesocricetus_auratus
ENSNGAG00000023097	Crnkl1	100	95.286	ENSMICG00000006048	CRNKL1	100	95.286	Microcebus_murinus
ENSNGAG00000023097	Crnkl1	100	90.714	ENSMOCG00000000681	-	99	90.714	Microtus_ochrogaster
ENSNGAG00000023097	Crnkl1	97	68.483	ENSMOCG00000004179	-	96	68.705	Microtus_ochrogaster
ENSNGAG00000023097	Crnkl1	92	83.981	ENSMMOG00000017601	crnkl1	97	83.981	Mola_mola
ENSNGAG00000023097	Crnkl1	100	84.429	ENSMODG00000010857	-	99	84.429	Monodelphis_domestica
ENSNGAG00000023097	Crnkl1	100	92.582	ENSMODG00000005961	-	99	92.582	Monodelphis_domestica
ENSNGAG00000023097	Crnkl1	98	61.468	ENSMALG00000011211	crnkl1	89	61.816	Monopterus_albus
ENSNGAG00000023097	Crnkl1	100	96.143	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.143	Mus_caroli
ENSNGAG00000023097	Crnkl1	100	96.286	ENSMUSG00000001767	Crnkl1	99	96.286	Mus_musculus
ENSNGAG00000023097	Crnkl1	100	94.286	MGP_PahariEiJ_G0025838	Crnkl1	99	94.286	Mus_pahari
ENSNGAG00000023097	Crnkl1	100	96.143	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.143	Mus_spretus
ENSNGAG00000023097	Crnkl1	100	96.000	ENSMPUG00000001226	CRNKL1	100	96.000	Mustela_putorius_furo
ENSNGAG00000023097	Crnkl1	100	95.857	ENSMLUG00000016513	CRNKL1	89	95.857	Myotis_lucifugus
ENSNGAG00000023097	Crnkl1	99	85.507	ENSNBRG00000007867	crnkl1	89	85.507	Neolamprologus_brichardi
ENSNGAG00000023097	Crnkl1	100	91.286	ENSNLEG00000009862	CRNKL1	100	91.286	Nomascus_leucogenys
ENSNGAG00000023097	Crnkl1	98	93.265	ENSMEUG00000012167	-	100	93.265	Notamacropus_eugenii
ENSNGAG00000023097	Crnkl1	100	83.595	ENSMEUG00000002361	-	99	83.595	Notamacropus_eugenii
ENSNGAG00000023097	Crnkl1	76	65.348	ENSOPRG00000009242	-	61	65.348	Ochotona_princeps
ENSNGAG00000023097	Crnkl1	100	95.429	ENSODEG00000012175	CRNKL1	100	95.429	Octodon_degus
ENSNGAG00000023097	Crnkl1	99	85.079	ENSONIG00000018728	crnkl1	89	85.797	Oreochromis_niloticus
ENSNGAG00000023097	Crnkl1	99	95.994	ENSOCUG00000015484	CRNKL1	83	95.994	Oryctolagus_cuniculus
ENSNGAG00000023097	Crnkl1	99	81.519	ENSORLG00000017240	crnkl1	96	79.167	Oryzias_latipes
ENSNGAG00000023097	Crnkl1	97	83.358	ENSORLG00020001742	crnkl1	89	83.358	Oryzias_latipes_hni
ENSNGAG00000023097	Crnkl1	99	81.662	ENSORLG00015019564	crnkl1	91	81.662	Oryzias_latipes_hsok
ENSNGAG00000023097	Crnkl1	99	82.521	ENSOMEG00000019895	crnkl1	91	82.521	Oryzias_melastigma
ENSNGAG00000023097	Crnkl1	100	94.857	ENSOGAG00000011544	CRNKL1	100	94.857	Otolemur_garnettii
ENSNGAG00000023097	Crnkl1	100	95.000	ENSOARG00000002150	CRNKL1	89	95.000	Ovis_aries
ENSNGAG00000023097	Crnkl1	99	93.074	ENSPPAG00000027847	CRNKL1	83	93.143	Pan_paniscus
ENSNGAG00000023097	Crnkl1	100	96.143	ENSPPRG00000001955	CRNKL1	100	96.143	Panthera_pardus
ENSNGAG00000023097	Crnkl1	100	96.143	ENSPTIG00000007393	CRNKL1	100	96.143	Panthera_tigris_altaica
ENSNGAG00000023097	Crnkl1	100	94.143	ENSPTRG00000030609	CRNKL1	100	94.143	Pan_troglodytes
ENSNGAG00000023097	Crnkl1	100	94.571	ENSPANG00000017420	CRNKL1	100	94.571	Papio_anubis
ENSNGAG00000023097	Crnkl1	96	80.798	ENSPKIG00000017093	crnkl1	89	80.115	Paramormyrops_kingsleyae
ENSNGAG00000023097	Crnkl1	99	90.805	ENSPSIG00000012705	CRNKL1	99	90.805	Pelodiscus_sinensis
ENSNGAG00000023097	Crnkl1	99	78.129	ENSPMGG00000006263	crnkl1	96	77.633	Periophthalmus_magnuspinnatus
ENSNGAG00000023097	Crnkl1	100	96.000	ENSPEMG00000000073	-	99	96.000	Peromyscus_maniculatus_bairdii
ENSNGAG00000023097	Crnkl1	99	80.171	ENSPMAG00000002250	crnkl1	99	80.171	Petromyzon_marinus
ENSNGAG00000023097	Crnkl1	100	93.429	ENSPCIG00000025825	CRNKL1	96	93.429	Phascolarctos_cinereus
ENSNGAG00000023097	Crnkl1	97	84.242	ENSPFOG00000005102	crnkl1	93	82.454	Poecilia_formosa
ENSNGAG00000023097	Crnkl1	97	84.242	ENSPLAG00000007288	crnkl1	90	82.336	Poecilia_latipinna
ENSNGAG00000023097	Crnkl1	97	84.389	ENSPMEG00000008865	crnkl1	93	82.596	Poecilia_mexicana
ENSNGAG00000023097	Crnkl1	97	83.947	ENSPREG00000012615	crnkl1	92	82.209	Poecilia_reticulata
ENSNGAG00000023097	Crnkl1	99	94.228	ENSPPYG00000010747	CRNKL1	81	94.286	Pongo_abelii
ENSNGAG00000023097	Crnkl1	99	89.466	ENSPCAG00000003296	CRNKL1	85	89.571	Procavia_capensis
ENSNGAG00000023097	Crnkl1	100	94.857	ENSPCOG00000017608	CRNKL1	83	94.857	Propithecus_coquereli
ENSNGAG00000023097	Crnkl1	100	95.714	ENSPVAG00000006207	CRNKL1	83	95.714	Pteropus_vampyrus
ENSNGAG00000023097	Crnkl1	99	85.217	ENSPNYG00000001977	crnkl1	90	85.217	Pundamilia_nyererei
ENSNGAG00000023097	Crnkl1	98	86.237	ENSPNAG00000001507	crnkl1	98	82.378	Pygocentrus_nattereri
ENSNGAG00000023097	Crnkl1	100	96.286	ENSRNOG00000010587	Crnkl1	99	96.286	Rattus_norvegicus
ENSNGAG00000023097	Crnkl1	100	95.857	ENSRNOG00000040045	Crnkl1	99	95.857	Rattus_norvegicus
ENSNGAG00000023097	Crnkl1	100	94.429	ENSRBIG00000031770	CRNKL1	100	94.429	Rhinopithecus_bieti
ENSNGAG00000023097	Crnkl1	100	94.286	ENSRROG00000040450	CRNKL1	100	94.286	Rhinopithecus_roxellana
ENSNGAG00000023097	Crnkl1	94	36.700	YLR117C	CLF1	99	36.790	Saccharomyces_cerevisiae
ENSNGAG00000023097	Crnkl1	100	94.429	ENSSBOG00000029672	CRNKL1	100	94.429	Saimiri_boliviensis_boliviensis
ENSNGAG00000023097	Crnkl1	96	72.024	ENSSHAG00000011199	CRNKL1	99	72.024	Sarcophilus_harrisii
ENSNGAG00000023097	Crnkl1	96	85.630	ENSSFOG00015000946	crnkl1	89	84.075	Scleropages_formosus
ENSNGAG00000023097	Crnkl1	99	82.260	ENSSMAG00000007933	crnkl1	89	82.260	Scophthalmus_maximus
ENSNGAG00000023097	Crnkl1	99	77.937	ENSSDUG00000012625	crnkl1	87	78.582	Seriola_dumerili
ENSNGAG00000023097	Crnkl1	99	83.811	ENSSLDG00000021413	crnkl1	88	84.515	Seriola_lalandi_dorsalis
ENSNGAG00000023097	Crnkl1	100	94.714	ENSSARG00000006443	CRNKL1	82	94.714	Sorex_araneus
ENSNGAG00000023097	Crnkl1	99	90.948	ENSSPUG00000005254	CRNKL1	99	90.948	Sphenodon_punctatus
ENSNGAG00000023097	Crnkl1	97	85.420	ENSSPAG00000016150	crnkl1	86	85.420	Stegastes_partitus
ENSNGAG00000023097	Crnkl1	100	95.857	ENSSSCG00000038587	CRNKL1	99	95.857	Sus_scrofa
ENSNGAG00000023097	Crnkl1	99	90.258	ENSTGUG00000007645	CRNKL1	98	90.258	Taeniopygia_guttata
ENSNGAG00000023097	Crnkl1	98	78.917	ENSTRUG00000015417	crnkl1	90	78.324	Takifugu_rubripes
ENSNGAG00000023097	Crnkl1	97	83.063	ENSTNIG00000010710	crnkl1	99	81.805	Tetraodon_nigroviridis
ENSNGAG00000023097	Crnkl1	92	94.419	ENSTBEG00000001304	CRNKL1	82	94.419	Tupaia_belangeri
ENSNGAG00000023097	Crnkl1	92	91.783	ENSTTRG00000000484	CRNKL1	81	91.783	Tursiops_truncatus
ENSNGAG00000023097	Crnkl1	100	96.143	ENSUAMG00000018586	CRNKL1	100	96.143	Ursus_americanus
ENSNGAG00000023097	Crnkl1	100	96.143	ENSUMAG00000024957	CRNKL1	100	96.143	Ursus_maritimus
ENSNGAG00000023097	Crnkl1	100	95.857	ENSVVUG00000012559	CRNKL1	82	95.857	Vulpes_vulpes
ENSNGAG00000023097	Crnkl1	99	88.412	ENSXETG00000009698	crnkl1	99	88.412	Xenopus_tropicalis
ENSNGAG00000023097	Crnkl1	97	83.652	ENSXCOG00000000824	crnkl1	91	82.014	Xiphophorus_couchianus
ENSNGAG00000023097	Crnkl1	97	84.389	ENSXMAG00000006896	crnkl1	91	82.734	Xiphophorus_maculatus