EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000023121 (Gene tree)
Gene ID: 103731117
Gene Symbol: Casc3
Alias: Btz|Mln51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 17736 bases
Position: chrKL199983.1:158433-176168
Accession: 103731117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000025049	Btz	PF09405.10	9.4e-24	1	1
ENSNGAP00000025054	Btz	PF09405.10	5.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000030765	-	3509	XM_008829430	ENSNGAP00000025049	700 (aa)	XP_008827652	UPI0004ED5DEA
ENSNGAT00000030770	-	2034	-	ENSNGAP00000025054	677 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000023121's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03013	RNA transport	KEGG
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023121	Casc3	100	90.327	ENSG00000108349	CASC3	100	91.323	Homo_sapiens
ENSNGAG00000023121	Casc3	83	50.160	ENSAPOG00000008467	casc3	77	51.634	Acanthochromis_polyacanthus
ENSNGAG00000023121	Casc3	100	91.323	ENSAMEG00000007764	CASC3	100	91.750	Ailuropoda_melanoleuca
ENSNGAG00000023121	Casc3	78	50.000	ENSACIG00000000720	casc3	83	48.925	Amphilophus_citrinellus
ENSNGAG00000023121	Casc3	75	52.581	ENSAOCG00000016676	casc3	56	66.000	Amphiprion_ocellaris
ENSNGAG00000023121	Casc3	84	52.581	ENSAPEG00000006787	casc3	77	52.131	Amphiprion_percula
ENSNGAG00000023121	Casc3	81	53.333	ENSATEG00000017196	casc3	56	64.474	Anabas_testudineus
ENSNGAG00000023121	Casc3	99	65.193	ENSACAG00000002674	CASC3	99	65.616	Anolis_carolinensis
ENSNGAG00000023121	Casc3	66	92.925	ENSANAG00000031954	-	100	92.925	Aotus_nancymaae
ENSNGAG00000023121	Casc3	99	80.491	ENSANAG00000034820	-	98	84.866	Aotus_nancymaae
ENSNGAG00000023121	Casc3	73	58.786	ENSAMXG00000032452	casc3	62	58.101	Astyanax_mexicanus
ENSNGAG00000023121	Casc3	100	91.038	ENSBTAG00000006250	CASC3	100	90.612	Bos_taurus
ENSNGAG00000023121	Casc3	100	88.905	ENSCJAG00000016032	CASC3	100	89.047	Callithrix_jacchus
ENSNGAG00000023121	Casc3	100	91.038	ENSCAFG00000016141	CASC3	100	92.034	Canis_familiaris
ENSNGAG00000023121	Casc3	100	90.199	ENSCAFG00020018882	CASC3	99	94.389	Canis_lupus_dingo
ENSNGAG00000023121	Casc3	100	90.185	ENSCHIG00000006338	CASC3	100	89.758	Capra_hircus
ENSNGAG00000023121	Casc3	89	92.332	ENSTSYG00000002975	CASC3	89	93.419	Carlito_syrichta
ENSNGAG00000023121	Casc3	88	86.201	ENSCAPG00000010514	CASC3	100	87.662	Cavia_aperea
ENSNGAG00000023121	Casc3	100	85.470	ENSCPOG00000015139	CASC3	100	86.325	Cavia_porcellus
ENSNGAG00000023121	Casc3	100	87.216	ENSCCAG00000033620	CASC3	100	90.057	Cebus_capucinus
ENSNGAG00000023121	Casc3	100	91.051	ENSCATG00000033593	CASC3	100	91.903	Cercocebus_atys
ENSNGAG00000023121	Casc3	100	87.037	ENSCLAG00000013730	CASC3	100	87.322	Chinchilla_lanigera
ENSNGAG00000023121	Casc3	100	91.051	ENSCSAG00000002777	CASC3	100	91.903	Chlorocebus_sabaeus
ENSNGAG00000023121	Casc3	99	71.629	ENSCPBG00000004750	CASC3	99	72.599	Chrysemys_picta_bellii
ENSNGAG00000023121	Casc3	100	90.625	ENSCANG00000008814	CASC3	100	91.477	Colobus_angolensis_palliatus
ENSNGAG00000023121	Casc3	100	92.165	ENSCGRG00001014706	Casc3	100	91.453	Cricetulus_griseus_chok1gshd
ENSNGAG00000023121	Casc3	100	85.043	ENSCGRG00000001952	Casc3	96	91.332	Cricetulus_griseus_crigri
ENSNGAG00000023121	Casc3	86	48.943	ENSCSEG00000010047	casc3	55	67.333	Cynoglossus_semilaevis
ENSNGAG00000023121	Casc3	100	90.896	ENSDNOG00000017249	CASC3	96	91.323	Dasypus_novemcinctus
ENSNGAG00000023121	Casc3	100	83.073	ENSETEG00000013720	CASC3	100	83.215	Echinops_telfairi
ENSNGAG00000023121	Casc3	88	37.518	ENSEBUG00000010654	casc3	98	34.914	Eptatretus_burgeri
ENSNGAG00000023121	Casc3	100	90.071	ENSEASG00005002909	CASC3	100	92.810	Equus_asinus_asinus
ENSNGAG00000023121	Casc3	100	91.181	ENSECAG00000019947	CASC3	88	91.607	Equus_caballus
ENSNGAG00000023121	Casc3	73	85.938	ENSEEUG00000014253	CASC3	100	86.719	Erinaceus_europaeus
ENSNGAG00000023121	Casc3	100	91.750	ENSFCAG00000014998	CASC3	100	92.176	Felis_catus
ENSNGAG00000023121	Casc3	88	71.362	ENSFALG00000000412	CASC3	98	71.339	Ficedula_albicollis
ENSNGAG00000023121	Casc3	93	83.714	ENSFDAG00000020696	CASC3	100	84.170	Fukomys_damarensis
ENSNGAG00000023121	Casc3	99	66.381	ENSGALG00000031813	CASC3	99	69.373	Gallus_gallus
ENSNGAG00000023121	Casc3	89	73.609	ENSGAGG00000008432	CASC3	94	75.444	Gopherus_agassizii
ENSNGAG00000023121	Casc3	100	90.327	ENSGGOG00000005067	CASC3	100	91.181	Gorilla_gorilla
ENSNGAG00000023121	Casc3	100	87.340	ENSHGLG00000012117	CASC3	100	87.340	Heterocephalus_glaber_female
ENSNGAG00000023121	Casc3	89	87.220	ENSHGLG00100002268	CASC3	99	87.480	Heterocephalus_glaber_male
ENSNGAG00000023121	Casc3	100	91.465	ENSSTOG00000006374	CASC3	100	92.034	Ictidomys_tridecemlineatus
ENSNGAG00000023121	Casc3	100	89.205	ENSJJAG00000023525	Casc3	100	89.915	Jaculus_jaculus
ENSNGAG00000023121	Casc3	66	61.765	ENSKMAG00000019507	casc3	81	48.522	Kryptolebias_marmoratus
ENSNGAG00000023121	Casc3	68	62.585	ENSLBEG00000005435	casc3	77	44.688	Labrus_bergylta
ENSNGAG00000023121	Casc3	89	58.293	ENSLACG00000013200	CASC3	99	55.769	Latimeria_chalumnae
ENSNGAG00000023121	Casc3	69	72.947	ENSLOCG00000013518	casc3	65	70.048	Lepisosteus_oculatus
ENSNGAG00000023121	Casc3	100	88.905	ENSLAFG00000000606	CASC3	100	89.900	Loxodonta_africana
ENSNGAG00000023121	Casc3	100	91.051	ENSMFAG00000041496	CASC3	99	93.709	Macaca_fascicularis
ENSNGAG00000023121	Casc3	100	91.051	ENSMMUG00000045187	CASC3	100	91.903	Macaca_mulatta
ENSNGAG00000023121	Casc3	89	91.228	ENSMLEG00000029049	CASC3	98	92.308	Mandrillus_leucophaeus
ENSNGAG00000023121	Casc3	82	51.118	ENSMAMG00000005235	casc3	76	51.466	Mastacembelus_armatus
ENSNGAG00000023121	Casc3	86	73.641	ENSMGAG00000013247	CASC3	99	72.150	Meleagris_gallopavo
ENSNGAG00000023121	Casc3	100	79.351	ENSMAUG00000006023	Casc3	95	90.637	Mesocricetus_auratus
ENSNGAG00000023121	Casc3	100	89.474	ENSMICG00000003321	CASC3	100	91.181	Microcebus_murinus
ENSNGAG00000023121	Casc3	100	91.453	ENSMOCG00000013644	Casc3	100	89.744	Microtus_ochrogaster
ENSNGAG00000023121	Casc3	100	77.493	ENSMODG00000013044	CASC3	92	78.632	Monodelphis_domestica
ENSNGAG00000023121	Casc3	100	92.143	MGP_CAROLIEiJ_G0017099	Casc3	100	91.143	Mus_caroli
ENSNGAG00000023121	Casc3	100	91.571	ENSMUSG00000078676	Casc3	100	90.571	Mus_musculus
ENSNGAG00000023121	Casc3	100	91.571	MGP_SPRETEiJ_G0017943	Casc3	100	90.571	Mus_spretus
ENSNGAG00000023121	Casc3	100	91.181	ENSMPUG00000014903	CASC3	100	91.607	Mustela_putorius_furo
ENSNGAG00000023121	Casc3	100	86.364	ENSMLUG00000010520	CASC3	100	89.062	Myotis_lucifugus
ENSNGAG00000023121	Casc3	100	89.504	ENSNLEG00000001598	CASC3	100	90.754	Nomascus_leucogenys
ENSNGAG00000023121	Casc3	60	72.406	ENSMEUG00000015662	CASC3	100	72.630	Notamacropus_eugenii
ENSNGAG00000023121	Casc3	73	87.255	ENSOPRG00000007240	-	75	88.063	Ochotona_princeps
ENSNGAG00000023121	Casc3	100	86.544	ENSODEG00000017858	CASC3	100	87.960	Octodon_degus
ENSNGAG00000023121	Casc3	84	54.037	ENSONIG00000009337	casc3	91	50.391	Oreochromis_niloticus
ENSNGAG00000023121	Casc3	82	53.434	ENSOANG00000003499	-	86	69.307	Ornithorhynchus_anatinus
ENSNGAG00000023121	Casc3	100	92.023	ENSOCUG00000002954	CASC3	100	92.165	Oryctolagus_cuniculus
ENSNGAG00000023121	Casc3	99	90.844	ENSOGAG00000034486	CASC3	98	91.989	Otolemur_garnettii
ENSNGAG00000023121	Casc3	100	91.038	ENSOARG00000013239	CASC3	100	90.612	Ovis_aries
ENSNGAG00000023121	Casc3	100	90.327	ENSPPAG00000035069	CASC3	100	91.323	Pan_paniscus
ENSNGAG00000023121	Casc3	100	91.750	ENSPPRG00000023670	CASC3	100	92.176	Panthera_pardus
ENSNGAG00000023121	Casc3	91	91.366	ENSPTIG00000010891	CASC3	91	91.994	Panthera_tigris_altaica
ENSNGAG00000023121	Casc3	100	90.767	ENSPANG00000021708	CASC3	100	91.619	Papio_anubis
ENSNGAG00000023121	Casc3	88	47.679	ENSPKIG00000023186	casc3	79	49.280	Paramormyrops_kingsleyae
ENSNGAG00000023121	Casc3	100	93.295	ENSPEMG00000009774	Casc3	100	92.297	Peromyscus_maniculatus_bairdii
ENSNGAG00000023121	Casc3	100	80.228	ENSPCIG00000025678	CASC3	100	80.654	Phascolarctos_cinereus
ENSNGAG00000023121	Casc3	90	48.837	ENSPFOG00000017632	casc3	99	47.042	Poecilia_formosa
ENSNGAG00000023121	Casc3	81	54.839	ENSPLAG00000005268	casc3	61	63.441	Poecilia_latipinna
ENSNGAG00000023121	Casc3	65	49.007	ENSPMEG00000010299	casc3	73	49.558	Poecilia_mexicana
ENSNGAG00000023121	Casc3	75	67.143	ENSPREG00000011856	casc3	82	51.079	Poecilia_reticulata
ENSNGAG00000023121	Casc3	100	88.905	ENSPPYG00000008467	CASC3	100	91.038	Pongo_abelii
ENSNGAG00000023121	Casc3	100	87.801	ENSPCOG00000008183	CASC3	100	90.185	Propithecus_coquereli
ENSNGAG00000023121	Casc3	100	89.189	ENSPVAG00000008556	CASC3	100	91.181	Pteropus_vampyrus
ENSNGAG00000023121	Casc3	91	96.333	ENSRNOG00000009716	Casc3	100	94.000	Rattus_norvegicus
ENSNGAG00000023121	Casc3	100	90.909	ENSRBIG00000033289	CASC3	100	90.625	Rhinopithecus_bieti
ENSNGAG00000023121	Casc3	100	90.909	ENSRROG00000022337	CASC3	100	91.761	Rhinopithecus_roxellana
ENSNGAG00000023121	Casc3	88	88.997	ENSSBOG00000031406	CASC3	98	91.100	Saimiri_boliviensis_boliviensis
ENSNGAG00000023121	Casc3	89	82.935	ENSSHAG00000013338	CASC3	99	82.853	Sarcophilus_harrisii
ENSNGAG00000023121	Casc3	71	64.384	ENSSMAG00000016096	casc3	54	67.857	Scophthalmus_maximus
ENSNGAG00000023121	Casc3	61	77.119	ENSSLDG00000020308	casc3	67	73.333	Seriola_lalandi_dorsalis
ENSNGAG00000023121	Casc3	87	78.415	ENSSARG00000010378	CASC3	98	79.223	Sorex_araneus
ENSNGAG00000023121	Casc3	89	89.457	ENSSSCG00000017477	CASC3	98	90.209	Sus_scrofa
ENSNGAG00000023121	Casc3	77	71.810	ENSTGUG00000002300	CASC3	99	71.810	Taeniopygia_guttata
ENSNGAG00000023121	Casc3	90	48.869	ENSTNIG00000003208	casc3	99	46.685	Tetraodon_nigroviridis
ENSNGAG00000023121	Casc3	66	90.952	ENSTBEG00000017459	CASC3	67	90.094	Tupaia_belangeri
ENSNGAG00000023121	Casc3	89	78.477	ENSTTRG00000016896	CASC3	98	80.912	Tursiops_truncatus
ENSNGAG00000023121	Casc3	100	90.341	ENSUAMG00000015116	CASC3	99	93.770	Ursus_americanus
ENSNGAG00000023121	Casc3	89	90.575	ENSUMAG00000017697	CASC3	98	91.172	Ursus_maritimus
ENSNGAG00000023121	Casc3	77	94.118	ENSVPAG00000000799	CASC3	75	94.118	Vicugna_pacos
ENSNGAG00000023121	Casc3	100	90.896	ENSVVUG00000000997	CASC3	100	91.892	Vulpes_vulpes
ENSNGAG00000023121	Casc3	89	60.157	ENSXETG00000024395	casc3	98	56.879	Xenopus_tropicalis
ENSNGAG00000023121	Casc3	68	65.269	ENSXMAG00000013937	casc3	57	64.596	Xiphophorus_maculatus