EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000023276 (Gene tree)
Gene ID: 103731599
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 351093 bases
Position: chrKL200119.1:8380764-8731856
Accession: 103731599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000025265	Fox-1_C	PF12414.8	1.5e-42	1	1
ENSNGAP00000025273	Fox-1_C	PF12414.8	1.5e-42	1	1
ENSNGAP00000025271	Fox-1_C	PF12414.8	1.7e-40	1	1
ENSNGAP00000025265	RRM_1	PF00076.22	3e-18	1	1
ENSNGAP00000025273	RRM_1	PF00076.22	3.1e-18	1	1
ENSNGAP00000025271	RRM_1	PF00076.22	3.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000030990	-	1257	XM_008829959	ENSNGAP00000025271	418 (aa)	XP_008828181	UPI0004ED3596
ENSNGAT00000030992	-	1191	-	ENSNGAP00000025273	396 (aa)	-	-
ENSNGAT00000030984	-	1195	XM_008829958	ENSNGAP00000025265	388 (aa)	XP_008828180	-

Gene Model

Click here to download ENSNGAG00000023276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000023276	Rbfox1	94	58.454	ENSNGAG00000018006	Rbfox3	100	62.468
ENSNGAG00000023276	Rbfox1	100	61.881	ENSNGAG00000020528	Rbfox2	99	61.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023276	Rbfox1	100	98.711	ENSG00000078328	RBFOX1	100	98.086	Homo_sapiens
ENSNGAG00000023276	Rbfox1	100	75.616	ENSAPOG00000003197	rbfox1	100	75.181	Acanthochromis_polyacanthus
ENSNGAG00000023276	Rbfox1	60	96.000	ENSAMEG00000008605	RBFOX1	100	96.000	Ailuropoda_melanoleuca
ENSNGAG00000023276	Rbfox1	69	64.865	ENSACIG00000005478	rbfox1	68	65.320	Amphilophus_citrinellus
ENSNGAG00000023276	Rbfox1	74	70.915	ENSAOCG00000008283	rbfox1	98	70.192	Amphiprion_ocellaris
ENSNGAG00000023276	Rbfox1	97	71.164	ENSAPEG00000010636	rbfox1	100	71.053	Amphiprion_percula
ENSNGAG00000023276	Rbfox1	74	69.481	ENSATEG00000007513	rbfox1	97	68.810	Anabas_testudineus
ENSNGAG00000023276	Rbfox1	100	94.588	ENSAPLG00000013263	RBFOX1	98	93.862	Anas_platyrhynchos
ENSNGAG00000023276	Rbfox1	100	87.980	ENSACAG00000004013	RBFOX1	98	87.980	Anolis_carolinensis
ENSNGAG00000023276	Rbfox1	100	96.144	ENSANAG00000029527	RBFOX1	98	97.704	Aotus_nancymaae
ENSNGAG00000023276	Rbfox1	57	88.288	ENSAMXG00000002431	rbfox1	65	88.000	Astyanax_mexicanus
ENSNGAG00000023276	Rbfox1	100	96.144	ENSBTAG00000007210	RBFOX1	98	97.704	Bos_taurus
ENSNGAG00000023276	Rbfox1	100	98.196	ENSCJAG00000017351	RBFOX1	100	97.608	Callithrix_jacchus
ENSNGAG00000023276	Rbfox1	100	98.325	ENSCAFG00000019082	RBFOX1	100	98.325	Canis_familiaris
ENSNGAG00000023276	Rbfox1	71	98.311	ENSCAFG00020024881	RBFOX1	83	98.311	Canis_lupus_dingo
ENSNGAG00000023276	Rbfox1	100	96.144	ENSCHIG00000023549	RBFOX1	98	97.704	Capra_hircus
ENSNGAG00000023276	Rbfox1	100	95.887	ENSTSYG00000005334	RBFOX1	100	97.943	Carlito_syrichta
ENSNGAG00000023276	Rbfox1	100	97.938	ENSCAPG00000017669	RBFOX1	100	97.938	Cavia_aperea
ENSNGAG00000023276	Rbfox1	100	97.938	ENSCPOG00000011314	RBFOX1	100	97.368	Cavia_porcellus
ENSNGAG00000023276	Rbfox1	100	97.608	ENSCCAG00000023031	RBFOX1	100	97.608	Cebus_capucinus
ENSNGAG00000023276	Rbfox1	100	98.086	ENSCATG00000033816	RBFOX1	100	98.086	Cercocebus_atys
ENSNGAG00000023276	Rbfox1	100	97.938	ENSCLAG00000012761	RBFOX1	100	97.368	Chinchilla_lanigera
ENSNGAG00000023276	Rbfox1	85	96.970	ENSCSAG00000008739	RBFOX1	88	96.970	Chlorocebus_sabaeus
ENSNGAG00000023276	Rbfox1	100	76.316	ENSCHOG00000012843	RBFOX1	100	76.316	Choloepus_hoffmanni
ENSNGAG00000023276	Rbfox1	100	94.588	ENSCPBG00000026626	RBFOX1	98	93.878	Chrysemys_picta_bellii
ENSNGAG00000023276	Rbfox1	100	98.086	ENSCANG00000033125	RBFOX1	100	98.086	Colobus_angolensis_palliatus
ENSNGAG00000023276	Rbfox1	100	98.325	ENSCGRG00001013729	Rbfox1	100	98.325	Cricetulus_griseus_chok1gshd
ENSNGAG00000023276	Rbfox1	100	98.325	ENSCGRG00000003272	Rbfox1	100	98.325	Cricetulus_griseus_crigri
ENSNGAG00000023276	Rbfox1	97	71.033	ENSCSEG00000008840	rbfox1	100	71.033	Cynoglossus_semilaevis
ENSNGAG00000023276	Rbfox1	100	81.491	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSNGAG00000023276	Rbfox1	100	98.196	ENSDNOG00000043612	RBFOX1	93	98.196	Dasypus_novemcinctus
ENSNGAG00000023276	Rbfox1	100	95.652	ENSDORG00000010024	Rbfox1	100	93.564	Dipodomys_ordii
ENSNGAG00000023276	Rbfox1	100	78.708	ENSETEG00000003771	RBFOX1	100	78.708	Echinops_telfairi
ENSNGAG00000023276	Rbfox1	100	98.969	ENSEASG00005011599	RBFOX1	98	98.469	Equus_asinus_asinus
ENSNGAG00000023276	Rbfox1	100	96.658	ENSECAG00000012667	RBFOX1	98	98.025	Equus_caballus
ENSNGAG00000023276	Rbfox1	84	69.412	ENSELUG00000013096	rbfox1	96	69.412	Esox_lucius
ENSNGAG00000023276	Rbfox1	100	98.711	ENSFCAG00000025322	RBFOX1	92	95.782	Felis_catus
ENSNGAG00000023276	Rbfox1	83	94.410	ENSFALG00000004027	RBFOX1	100	91.892	Ficedula_albicollis
ENSNGAG00000023276	Rbfox1	100	98.454	ENSFDAG00000007388	RBFOX1	100	97.847	Fukomys_damarensis
ENSNGAG00000023276	Rbfox1	100	93.062	ENSGALG00000034325	RBFOX1	100	93.062	Gallus_gallus
ENSNGAG00000023276	Rbfox1	100	92.344	ENSGAGG00000023681	RBFOX1	100	94.695	Gopherus_agassizii
ENSNGAG00000023276	Rbfox1	100	98.086	ENSGGOG00000016871	-	100	98.086	Gorilla_gorilla
ENSNGAG00000023276	Rbfox1	100	98.196	ENSHGLG00000016944	RBFOX1	100	97.608	Heterocephalus_glaber_female
ENSNGAG00000023276	Rbfox1	100	98.196	ENSHGLG00100003272	RBFOX1	100	97.608	Heterocephalus_glaber_male
ENSNGAG00000023276	Rbfox1	87	70.317	ENSHCOG00000016419	rbfox1	91	70.402	Hippocampus_comes
ENSNGAG00000023276	Rbfox1	97	83.554	ENSIPUG00000015215	rbfox1	100	83.554	Ictalurus_punctatus
ENSNGAG00000023276	Rbfox1	100	97.680	ENSSTOG00000000322	RBFOX1	100	96.890	Ictidomys_tridecemlineatus
ENSNGAG00000023276	Rbfox1	100	94.845	ENSJJAG00000002575	Rbfox1	100	94.737	Jaculus_jaculus
ENSNGAG00000023276	Rbfox1	100	72.980	ENSLBEG00000014659	rbfox1	98	72.727	Labrus_bergylta
ENSNGAG00000023276	Rbfox1	100	86.957	ENSLOCG00000006675	rbfox1	98	86.957	Lepisosteus_oculatus
ENSNGAG00000023276	Rbfox1	79	98.377	ENSLAFG00000011480	RBFOX1	100	98.701	Loxodonta_africana
ENSNGAG00000023276	Rbfox1	100	97.847	ENSMFAG00000036447	RBFOX1	100	97.847	Macaca_fascicularis
ENSNGAG00000023276	Rbfox1	100	97.847	ENSMMUG00000003458	RBFOX1	100	97.847	Macaca_mulatta
ENSNGAG00000023276	Rbfox1	100	97.847	ENSMNEG00000032034	RBFOX1	100	97.847	Macaca_nemestrina
ENSNGAG00000023276	Rbfox1	100	98.086	ENSMLEG00000015382	RBFOX1	100	98.086	Mandrillus_leucophaeus
ENSNGAG00000023276	Rbfox1	97	74.745	ENSMAMG00000003142	rbfox1	100	75.255	Mastacembelus_armatus
ENSNGAG00000023276	Rbfox1	72	90.000	ENSMGAG00000008606	RBFOX1	96	89.209	Meleagris_gallopavo
ENSNGAG00000023276	Rbfox1	99	58.333	ENSMAUG00000020570	Rbfox1	99	56.203	Mesocricetus_auratus
ENSNGAG00000023276	Rbfox1	100	91.495	ENSMICG00000034286	RBFOX1	100	89.330	Microcebus_murinus
ENSNGAG00000023276	Rbfox1	100	98.325	ENSMOCG00000020932	Rbfox1	100	98.325	Microtus_ochrogaster
ENSNGAG00000023276	Rbfox1	88	70.725	ENSMMOG00000009716	rbfox1	86	71.091	Mola_mola
ENSNGAG00000023276	Rbfox1	82	94.984	ENSMODG00000005826	RBFOX1	90	94.984	Monodelphis_domestica
ENSNGAG00000023276	Rbfox1	100	76.250	ENSMALG00000003337	rbfox1	100	75.306	Monopterus_albus
ENSNGAG00000023276	Rbfox1	100	98.565	MGP_CAROLIEiJ_G0020427	Rbfox1	100	98.565	Mus_caroli
ENSNGAG00000023276	Rbfox1	100	98.325	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSNGAG00000023276	Rbfox1	100	98.565	MGP_PahariEiJ_G0016135	Rbfox1	100	98.565	Mus_pahari
ENSNGAG00000023276	Rbfox1	100	98.086	MGP_SPRETEiJ_G0021321	Rbfox1	100	98.086	Mus_spretus
ENSNGAG00000023276	Rbfox1	85	96.970	ENSMPUG00000014822	RBFOX1	91	94.167	Mustela_putorius_furo
ENSNGAG00000023276	Rbfox1	79	99.023	ENSMLUG00000015896	RBFOX1	100	99.023	Myotis_lucifugus
ENSNGAG00000023276	Rbfox1	99	60.437	ENSNBRG00000011084	rbfox1	98	58.837	Neolamprologus_brichardi
ENSNGAG00000023276	Rbfox1	100	97.847	ENSNLEG00000010017	-	100	97.847	Nomascus_leucogenys
ENSNGAG00000023276	Rbfox1	100	80.622	ENSMEUG00000012525	RBFOX1	100	80.622	Notamacropus_eugenii
ENSNGAG00000023276	Rbfox1	100	79.665	ENSOPRG00000006199	-	100	79.665	Ochotona_princeps
ENSNGAG00000023276	Rbfox1	100	97.165	ENSODEG00000013166	RBFOX1	100	96.651	Octodon_degus
ENSNGAG00000023276	Rbfox1	85	93.939	ENSOANG00000002379	RBFOX1	88	93.939	Ornithorhynchus_anatinus
ENSNGAG00000023276	Rbfox1	56	97.685	ENSOCUG00000001205	-	100	94.222	Oryctolagus_cuniculus
ENSNGAG00000023276	Rbfox1	100	98.454	ENSOGAG00000025535	RBFOX1	98	98.454	Otolemur_garnettii
ENSNGAG00000023276	Rbfox1	63	86.831	ENSOARG00000005135	RBFOX1	100	84.861	Ovis_aries
ENSNGAG00000023276	Rbfox1	100	98.711	ENSPPAG00000036238	-	100	98.711	Pan_paniscus
ENSNGAG00000023276	Rbfox1	100	98.086	ENSPPRG00000006546	RBFOX1	100	98.086	Panthera_pardus
ENSNGAG00000023276	Rbfox1	100	87.371	ENSPTIG00000021154	RBFOX1	100	86.224	Panthera_tigris_altaica
ENSNGAG00000023276	Rbfox1	100	98.086	ENSPTRG00000007744	RBFOX1	100	98.086	Pan_troglodytes
ENSNGAG00000023276	Rbfox1	100	98.086	ENSPANG00000026500	RBFOX1	100	98.086	Papio_anubis
ENSNGAG00000023276	Rbfox1	100	82.821	ENSPKIG00000009667	-	95	83.424	Paramormyrops_kingsleyae
ENSNGAG00000023276	Rbfox1	75	84.138	ENSPKIG00000019353	rbfox1	86	84.138	Paramormyrops_kingsleyae
ENSNGAG00000023276	Rbfox1	100	94.588	ENSPSIG00000006523	RBFOX1	98	93.622	Pelodiscus_sinensis
ENSNGAG00000023276	Rbfox1	100	98.565	ENSPEMG00000017607	Rbfox1	100	98.565	Peromyscus_maniculatus_bairdii
ENSNGAG00000023276	Rbfox1	75	92.069	ENSPCIG00000026887	RBFOX1	100	92.069	Phascolarctos_cinereus
ENSNGAG00000023276	Rbfox1	85	96.970	ENSPPYG00000007079	-	91	94.167	Pongo_abelii
ENSNGAG00000023276	Rbfox1	90	89.153	ENSPCAG00000002630	RBFOX1	100	89.153	Procavia_capensis
ENSNGAG00000023276	Rbfox1	100	97.608	ENSPCOG00000025687	RBFOX1	100	97.608	Propithecus_coquereli
ENSNGAG00000023276	Rbfox1	100	93.541	ENSPVAG00000013467	RBFOX1	100	93.541	Pteropus_vampyrus
ENSNGAG00000023276	Rbfox1	97	81.061	ENSPNAG00000023109	rbfox1	100	81.061	Pygocentrus_nattereri
ENSNGAG00000023276	Rbfox1	100	98.196	ENSRNOG00000002827	Rbfox1	100	95.933	Rattus_norvegicus
ENSNGAG00000023276	Rbfox1	100	98.711	ENSRBIG00000044478	RBFOX1	100	98.711	Rhinopithecus_bieti
ENSNGAG00000023276	Rbfox1	100	98.086	ENSRROG00000044411	RBFOX1	100	98.086	Rhinopithecus_roxellana
ENSNGAG00000023276	Rbfox1	100	98.196	ENSSBOG00000033726	RBFOX1	97	98.196	Saimiri_boliviensis_boliviensis
ENSNGAG00000023276	Rbfox1	100	94.072	ENSSHAG00000009257	RBFOX1	100	93.199	Sarcophilus_harrisii
ENSNGAG00000023276	Rbfox1	90	70.506	ENSSFOG00015009955	-	87	68.449	Scleropages_formosus
ENSNGAG00000023276	Rbfox1	80	88.506	ENSSFOG00015023675	rbfox1	93	88.506	Scleropages_formosus
ENSNGAG00000023276	Rbfox1	100	76.790	ENSSMAG00000015505	rbfox1	96	74.109	Scophthalmus_maximus
ENSNGAG00000023276	Rbfox1	100	74.235	ENSSDUG00000016413	rbfox1	99	73.980	Seriola_dumerili
ENSNGAG00000023276	Rbfox1	87	72.059	ENSSLDG00000009353	rbfox1	97	70.833	Seriola_lalandi_dorsalis
ENSNGAG00000023276	Rbfox1	87	82.647	ENSSPUG00000009732	RBFOX1	87	82.698	Sphenodon_punctatus
ENSNGAG00000023276	Rbfox1	100	75.862	ENSSPAG00000009723	rbfox1	100	75.616	Stegastes_partitus
ENSNGAG00000023276	Rbfox1	97	98.133	ENSSSCG00000007917	RBFOX1	98	97.531	Sus_scrofa
ENSNGAG00000023276	Rbfox1	100	94.588	ENSTGUG00000004562	RBFOX1	99	94.588	Taeniopygia_guttata
ENSNGAG00000023276	Rbfox1	100	75.556	ENSTRUG00000020940	rbfox1	100	74.817	Takifugu_rubripes
ENSNGAG00000023276	Rbfox1	69	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSNGAG00000023276	Rbfox1	81	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSNGAG00000023276	Rbfox1	100	97.608	ENSTTRG00000005700	RBFOX1	100	97.608	Tursiops_truncatus
ENSNGAG00000023276	Rbfox1	99	94.517	ENSUAMG00000024633	RBFOX1	100	92.172	Ursus_americanus
ENSNGAG00000023276	Rbfox1	99	85.379	ENSUMAG00000003579	RBFOX1	100	83.333	Ursus_maritimus
ENSNGAG00000023276	Rbfox1	81	98.701	ENSVPAG00000001284	RBFOX1	81	98.701	Vicugna_pacos
ENSNGAG00000023276	Rbfox1	100	98.711	ENSVVUG00000017311	RBFOX1	92	95.782	Vulpes_vulpes