EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000023317 (Gene tree)
Gene ID: 103732877
Gene Symbol: Shq1
Alias: 2810403P18Rik|Grim-1
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 118471 bases
Position: chrKL200474.1:2882106-3000576
Accession: 103732877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000025325	SHQ1	PF04925.15	1.4e-49	1	1
ENSNGAP00000025324	SHQ1	PF04925.15	1.5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000031044	-	1587	-	ENSNGAP00000025324	528 (aa)	-	-
ENSNGAT00000031045	-	1557	XM_008831597	ENSNGAP00000025325	518 (aa)	XP_008829819	-

Gene Model

Click here to download ENSNGAG00000023317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023317	Shq1	99	69.474	ENSG00000144736	SHQ1	100	81.250	Homo_sapiens
ENSNGAG00000023317	Shq1	77	53.968	ENSAPOG00000000397	shq1	93	46.220	Acanthochromis_polyacanthus
ENSNGAG00000023317	Shq1	99	68.430	ENSAMEG00000015140	SHQ1	98	69.489	Ailuropoda_melanoleuca
ENSNGAG00000023317	Shq1	76	53.488	ENSACIG00000021249	shq1	77	50.740	Amphilophus_citrinellus
ENSNGAG00000023317	Shq1	77	55.102	ENSAOCG00000023311	shq1	91	46.564	Amphiprion_ocellaris
ENSNGAG00000023317	Shq1	77	54.649	ENSAPEG00000021686	shq1	91	46.620	Amphiprion_percula
ENSNGAG00000023317	Shq1	77	55.809	ENSATEG00000008475	shq1	78	51.153	Anabas_testudineus
ENSNGAG00000023317	Shq1	90	57.957	ENSAPLG00000013926	SHQ1	100	57.957	Anas_platyrhynchos
ENSNGAG00000023317	Shq1	99	53.345	ENSACAG00000014809	SHQ1	84	53.345	Anolis_carolinensis
ENSNGAG00000023317	Shq1	99	69.326	ENSANAG00000029241	SHQ1	98	68.972	Aotus_nancymaae
ENSNGAG00000023317	Shq1	98	56.333	ENSANAG00000030500	-	98	55.009	Aotus_nancymaae
ENSNGAG00000023317	Shq1	77	52.273	ENSACLG00000023077	shq1	79	46.414	Astatotilapia_calliptera
ENSNGAG00000023317	Shq1	75	51.064	ENSAMXG00000043822	shq1	82	49.787	Astyanax_mexicanus
ENSNGAG00000023317	Shq1	99	66.901	ENSBTAG00000005436	SHQ1	98	67.254	Bos_taurus
ENSNGAG00000023317	Shq1	75	32.787	WBGene00021655	Y48A5A.1	92	32.432	Caenorhabditis_elegans
ENSNGAG00000023317	Shq1	99	68.728	ENSCJAG00000015131	SHQ1	98	68.375	Callithrix_jacchus
ENSNGAG00000023317	Shq1	99	69.665	ENSCAFG00000006434	SHQ1	98	70.370	Canis_familiaris
ENSNGAG00000023317	Shq1	99	69.665	ENSCAFG00020016743	SHQ1	98	70.370	Canis_lupus_dingo
ENSNGAG00000023317	Shq1	99	66.197	ENSCHIG00000012271	SHQ1	89	67.257	Capra_hircus
ENSNGAG00000023317	Shq1	99	67.621	ENSTSYG00000014439	SHQ1	99	69.065	Carlito_syrichta
ENSNGAG00000023317	Shq1	72	87.273	ENSCAPG00000009343	SHQ1	98	87.273	Cavia_aperea
ENSNGAG00000023317	Shq1	99	66.096	ENSCPOG00000011443	SHQ1	99	66.781	Cavia_porcellus
ENSNGAG00000023317	Shq1	99	58.377	ENSCCAG00000027080	SHQ1	98	58.554	Cebus_capucinus
ENSNGAG00000023317	Shq1	98	55.495	ENSCCAG00000036087	-	97	54.396	Cebus_capucinus
ENSNGAG00000023317	Shq1	99	69.649	ENSCATG00000041238	SHQ1	98	69.298	Cercocebus_atys
ENSNGAG00000023317	Shq1	100	68.048	ENSCLAG00000004206	SHQ1	99	68.739	Chinchilla_lanigera
ENSNGAG00000023317	Shq1	83	65.073	ENSCSAG00000011514	SHQ1	98	64.033	Chlorocebus_sabaeus
ENSNGAG00000023317	Shq1	59	56.812	ENSCHOG00000003273	-	100	57.225	Choloepus_hoffmanni
ENSNGAG00000023317	Shq1	99	54.912	ENSCPBG00000006441	SHQ1	93	55.867	Chrysemys_picta_bellii
ENSNGAG00000023317	Shq1	69	38.760	ENSCING00000008013	-	85	37.760	Ciona_intestinalis
ENSNGAG00000023317	Shq1	71	37.500	ENSCSAVG00000002332	-	93	36.816	Ciona_savignyi
ENSNGAG00000023317	Shq1	99	69.298	ENSCANG00000039295	SHQ1	99	69.123	Colobus_angolensis_palliatus
ENSNGAG00000023317	Shq1	99	74.291	ENSCGRG00001012583	Shq1	98	74.468	Cricetulus_griseus_chok1gshd
ENSNGAG00000023317	Shq1	99	74.291	ENSCGRG00000009849	Shq1	98	74.468	Cricetulus_griseus_crigri
ENSNGAG00000023317	Shq1	72	55.257	ENSCSEG00000007829	shq1	75	53.533	Cynoglossus_semilaevis
ENSNGAG00000023317	Shq1	76	53.505	ENSCVAG00000020049	shq1	93	45.487	Cyprinodon_variegatus
ENSNGAG00000023317	Shq1	76	54.206	ENSDARG00000058522	shq1	84	48.000	Danio_rerio
ENSNGAG00000023317	Shq1	99	66.843	ENSDNOG00000033937	SHQ1	98	67.782	Dasypus_novemcinctus
ENSNGAG00000023317	Shq1	87	84.158	ENSETEG00000005766	SHQ1	79	84.158	Echinops_telfairi
ENSNGAG00000023317	Shq1	64	46.216	ENSEBUG00000005445	shq1	89	43.878	Eptatretus_burgeri
ENSNGAG00000023317	Shq1	99	69.489	ENSEASG00005002237	SHQ1	98	69.841	Equus_asinus_asinus
ENSNGAG00000023317	Shq1	99	68.783	ENSECAG00000015673	SHQ1	96	69.136	Equus_caballus
ENSNGAG00000023317	Shq1	99	66.138	ENSEEUG00000010568	SHQ1	98	66.490	Erinaceus_europaeus
ENSNGAG00000023317	Shq1	72	55.012	ENSELUG00000003476	shq1	81	52.770	Esox_lucius
ENSNGAG00000023317	Shq1	99	70.285	ENSFCAG00000012781	SHQ1	98	70.285	Felis_catus
ENSNGAG00000023317	Shq1	99	53.767	ENSFALG00000013428	SHQ1	93	55.439	Ficedula_albicollis
ENSNGAG00000023317	Shq1	100	65.203	ENSFDAG00000005595	SHQ1	91	64.924	Fukomys_damarensis
ENSNGAG00000023317	Shq1	76	53.613	ENSFHEG00000017552	shq1	94	46.585	Fundulus_heteroclitus
ENSNGAG00000023317	Shq1	68	53.846	ENSGMOG00000007350	shq1	100	53.333	Gadus_morhua
ENSNGAG00000023317	Shq1	99	53.603	ENSGALG00000007798	SHQ1	93	53.427	Gallus_gallus
ENSNGAG00000023317	Shq1	68	51.938	ENSGACG00000011797	shq1	100	51.163	Gasterosteus_aculeatus
ENSNGAG00000023317	Shq1	99	69.474	ENSGGOG00000034818	SHQ1	98	69.474	Gorilla_gorilla
ENSNGAG00000023317	Shq1	77	52.045	ENSHBUG00000010857	shq1	78	48.945	Haplochromis_burtoni
ENSNGAG00000023317	Shq1	99	67.235	ENSHGLG00000003637	SHQ1	90	67.517	Heterocephalus_glaber_female
ENSNGAG00000023317	Shq1	99	67.466	ENSHGLG00100011957	SHQ1	90	67.747	Heterocephalus_glaber_male
ENSNGAG00000023317	Shq1	76	53.095	ENSHCOG00000010799	shq1	79	49.573	Hippocampus_comes
ENSNGAG00000023317	Shq1	78	53.531	ENSIPUG00000001247	shq1	91	47.378	Ictalurus_punctatus
ENSNGAG00000023317	Shq1	99	64.550	ENSSTOG00000010043	SHQ1	100	65.256	Ictidomys_tridecemlineatus
ENSNGAG00000023317	Shq1	100	73.179	ENSJJAG00000017611	Shq1	98	85.892	Jaculus_jaculus
ENSNGAG00000023317	Shq1	76	53.846	ENSKMAG00000004457	shq1	89	46.595	Kryptolebias_marmoratus
ENSNGAG00000023317	Shq1	98	51.761	ENSLACG00000014243	SHQ1	85	52.557	Latimeria_chalumnae
ENSNGAG00000023317	Shq1	97	49.291	ENSLOCG00000009970	shq1	95	49.101	Lepisosteus_oculatus
ENSNGAG00000023317	Shq1	99	70.000	ENSMFAG00000039148	SHQ1	98	69.649	Macaca_fascicularis
ENSNGAG00000023317	Shq1	99	55.805	ENSMFAG00000037396	-	98	54.206	Macaca_fascicularis
ENSNGAG00000023317	Shq1	91	68.582	ENSMMUG00000009571	SHQ1	95	67.625	Macaca_mulatta
ENSNGAG00000023317	Shq1	99	55.431	ENSMMUG00000021761	-	98	53.832	Macaca_mulatta
ENSNGAG00000023317	Shq1	99	70.000	ENSMNEG00000032667	SHQ1	98	69.649	Macaca_nemestrina
ENSNGAG00000023317	Shq1	99	69.474	ENSMLEG00000038493	SHQ1	98	69.123	Mandrillus_leucophaeus
ENSNGAG00000023317	Shq1	77	54.005	ENSMAMG00000023432	shq1	74	52.201	Mastacembelus_armatus
ENSNGAG00000023317	Shq1	77	52.273	ENSMZEG00005008649	shq1	78	49.156	Maylandia_zebra
ENSNGAG00000023317	Shq1	99	53.076	ENSMGAG00000009640	SHQ1	93	52.900	Meleagris_gallopavo
ENSNGAG00000023317	Shq1	99	74.423	ENSMAUG00000022030	Shq1	98	74.778	Mesocricetus_auratus
ENSNGAG00000023317	Shq1	99	67.708	ENSMICG00000009224	SHQ1	98	67.882	Microcebus_murinus
ENSNGAG00000023317	Shq1	85	88.750	ENSMOCG00000017836	Shq1	97	88.750	Microtus_ochrogaster
ENSNGAG00000023317	Shq1	77	52.174	ENSMMOG00000010569	shq1	94	46.060	Mola_mola
ENSNGAG00000023317	Shq1	98	53.996	ENSMODG00000003926	SHQ1	100	53.996	Monodelphis_domestica
ENSNGAG00000023317	Shq1	97	48.732	ENSMALG00000008870	shq1	90	48.913	Monopterus_albus
ENSNGAG00000023317	Shq1	100	74.291	MGP_CAROLIEiJ_G0028689	Shq1	98	74.645	Mus_caroli
ENSNGAG00000023317	Shq1	100	74.468	ENSMUSG00000035378	Shq1	98	74.823	Mus_musculus
ENSNGAG00000023317	Shq1	100	73.404	MGP_PahariEiJ_G0022440	Shq1	98	75.177	Mus_pahari
ENSNGAG00000023317	Shq1	100	74.291	MGP_SPRETEiJ_G0029717	Shq1	98	74.291	Mus_spretus
ENSNGAG00000023317	Shq1	99	68.607	ENSMPUG00000017006	SHQ1	96	69.665	Mustela_putorius_furo
ENSNGAG00000023317	Shq1	91	61.641	ENSMLUG00000013539	SHQ1	98	62.977	Myotis_lucifugus
ENSNGAG00000023317	Shq1	60	49.003	ENSNBRG00000024004	shq1	74	45.714	Neolamprologus_brichardi
ENSNGAG00000023317	Shq1	99	71.353	ENSNLEG00000002731	SHQ1	98	70.475	Nomascus_leucogenys
ENSNGAG00000023317	Shq1	75	81.579	ENSMEUG00000009350	-	72	81.579	Notamacropus_eugenii
ENSNGAG00000023317	Shq1	50	85.784	ENSOPRG00000013963	-	74	85.784	Ochotona_princeps
ENSNGAG00000023317	Shq1	85	81.328	ENSODEG00000009192	SHQ1	98	81.328	Octodon_degus
ENSNGAG00000023317	Shq1	77	52.500	ENSONIG00000020264	shq1	78	49.367	Oreochromis_niloticus
ENSNGAG00000023317	Shq1	99	67.478	ENSOCUG00000016695	SHQ1	98	68.348	Oryctolagus_cuniculus
ENSNGAG00000023317	Shq1	75	52.482	ENSORLG00000023538	shq1	92	47.582	Oryzias_latipes
ENSNGAG00000023317	Shq1	75	53.191	ENSORLG00020003697	shq1	91	47.969	Oryzias_latipes_hni
ENSNGAG00000023317	Shq1	75	52.719	ENSORLG00015021040	shq1	92	47.276	Oryzias_latipes_hsok
ENSNGAG00000023317	Shq1	75	54.137	ENSOMEG00000001225	shq1	85	50.622	Oryzias_melastigma
ENSNGAG00000023317	Shq1	99	70.157	ENSOGAG00000003898	SHQ1	100	70.157	Otolemur_garnettii
ENSNGAG00000023317	Shq1	99	66.143	ENSOARG00000009547	SHQ1	98	66.492	Ovis_aries
ENSNGAG00000023317	Shq1	99	69.474	ENSPPAG00000027714	SHQ1	98	69.474	Pan_paniscus
ENSNGAG00000023317	Shq1	99	54.710	ENSPPAG00000043263	-	98	53.804	Pan_paniscus
ENSNGAG00000023317	Shq1	99	70.018	ENSPPRG00000004769	SHQ1	98	70.018	Panthera_pardus
ENSNGAG00000023317	Shq1	99	66.192	ENSPTIG00000011478	SHQ1	98	66.192	Panthera_tigris_altaica
ENSNGAG00000023317	Shq1	99	54.945	ENSPTRG00000048303	-	98	54.212	Pan_troglodytes
ENSNGAG00000023317	Shq1	99	69.474	ENSPTRG00000015106	SHQ1	98	69.474	Pan_troglodytes
ENSNGAG00000023317	Shq1	99	68.947	ENSPANG00000002881	SHQ1	98	69.649	Papio_anubis
ENSNGAG00000023317	Shq1	75	54.157	ENSPKIG00000021517	shq1	93	45.259	Paramormyrops_kingsleyae
ENSNGAG00000023317	Shq1	99	54.974	ENSPSIG00000005536	SHQ1	93	55.420	Pelodiscus_sinensis
ENSNGAG00000023317	Shq1	76	52.235	ENSPMGG00000008838	shq1	80	49.257	Periophthalmus_magnuspinnatus
ENSNGAG00000023317	Shq1	99	75.488	ENSPEMG00000000251	Shq1	98	75.666	Peromyscus_maniculatus_bairdii
ENSNGAG00000023317	Shq1	77	52.262	ENSPMAG00000005372	shq1	99	52.620	Petromyzon_marinus
ENSNGAG00000023317	Shq1	76	51.843	ENSPFOG00000003118	shq1	90	49.184	Poecilia_formosa
ENSNGAG00000023317	Shq1	59	49.263	ENSPMEG00000011076	shq1	88	45.707	Poecilia_mexicana
ENSNGAG00000023317	Shq1	68	48.622	ENSPREG00000000591	shq1	88	42.400	Poecilia_reticulata
ENSNGAG00000023317	Shq1	99	68.827	ENSPPYG00000013717	SHQ1	98	68.827	Pongo_abelii
ENSNGAG00000023317	Shq1	97	67.446	ENSPCAG00000009035	SHQ1	99	67.549	Procavia_capensis
ENSNGAG00000023317	Shq1	99	67.826	ENSPCOG00000008415	SHQ1	98	68.870	Propithecus_coquereli
ENSNGAG00000023317	Shq1	99	69.542	ENSPVAG00000017392	SHQ1	99	69.542	Pteropus_vampyrus
ENSNGAG00000023317	Shq1	77	52.273	ENSPNYG00000003878	shq1	78	49.474	Pundamilia_nyererei
ENSNGAG00000023317	Shq1	75	53.066	ENSPNAG00000026840	shq1	79	50.728	Pygocentrus_nattereri
ENSNGAG00000023317	Shq1	100	70.519	ENSRNOG00000005433	Shq1	99	70.854	Rattus_norvegicus
ENSNGAG00000023317	Shq1	99	67.086	ENSRBIG00000026280	SHQ1	99	66.727	Rhinopithecus_bieti
ENSNGAG00000023317	Shq1	99	68.947	ENSRROG00000034126	SHQ1	99	68.596	Rhinopithecus_roxellana
ENSNGAG00000023317	Shq1	99	60.000	ENSSBOG00000021038	SHQ1	98	59.825	Saimiri_boliviensis_boliviensis
ENSNGAG00000023317	Shq1	98	55.851	ENSSHAG00000015077	SHQ1	98	55.851	Sarcophilus_harrisii
ENSNGAG00000023317	Shq1	78	57.798	ENSSFOG00015016241	shq1	91	50.551	Scleropages_formosus
ENSNGAG00000023317	Shq1	70	64.828	ENSSMAG00000016151	shq1	76	57.430	Scophthalmus_maximus
ENSNGAG00000023317	Shq1	75	55.711	ENSSDUG00000011986	shq1	79	52.165	Seriola_dumerili
ENSNGAG00000023317	Shq1	72	54.523	ENSSLDG00000013908	shq1	92	47.619	Seriola_lalandi_dorsalis
ENSNGAG00000023317	Shq1	99	54.064	ENSSARG00000007119	SHQ1	98	53.004	Sorex_araneus
ENSNGAG00000023317	Shq1	83	51.660	ENSSPUG00000011526	-	90	52.075	Sphenodon_punctatus
ENSNGAG00000023317	Shq1	99	66.491	ENSSSCG00000011518	SHQ1	98	66.842	Sus_scrofa
ENSNGAG00000023317	Shq1	99	53.152	ENSTGUG00000009933	SHQ1	99	53.659	Taeniopygia_guttata
ENSNGAG00000023317	Shq1	72	50.000	ENSTRUG00000009446	shq1	96	43.386	Takifugu_rubripes
ENSNGAG00000023317	Shq1	72	49.024	ENSTNIG00000007354	shq1	100	45.877	Tetraodon_nigroviridis
ENSNGAG00000023317	Shq1	68	87.234	ENSTBEG00000011295	SHQ1	61	87.234	Tupaia_belangeri
ENSNGAG00000023317	Shq1	99	67.908	ENSTTRG00000005320	SHQ1	98	68.262	Tursiops_truncatus
ENSNGAG00000023317	Shq1	99	67.695	ENSUMAG00000024031	SHQ1	97	69.708	Ursus_maritimus
ENSNGAG00000023317	Shq1	91	56.788	ENSVPAG00000004880	SHQ1	82	60.959	Vicugna_pacos
ENSNGAG00000023317	Shq1	99	69.841	ENSVVUG00000013906	SHQ1	98	70.547	Vulpes_vulpes
ENSNGAG00000023317	Shq1	76	58.333	ENSXETG00000032215	shq1	77	56.448	Xenopus_tropicalis