EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000023346 (Gene tree)
Gene ID: 103724672
Gene Symbol: Zic3
Alias: Ka
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 12560 bases
Position: chrKL205093.1:6434655-6447214
Accession: 103724672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000025368	zf-C2H2	PF00096.26	1.8e-21	1	4
ENSNGAP00000025368	zf-C2H2	PF00096.26	1.8e-21	2	4
ENSNGAP00000025368	zf-C2H2	PF00096.26	1.8e-21	3	4
ENSNGAP00000025368	zf-C2H2	PF00096.26	1.8e-21	4	4
ENSNGAP00000025367	zf-C2H2	PF00096.26	1.1e-20	1	4
ENSNGAP00000025367	zf-C2H2	PF00096.26	1.1e-20	2	4
ENSNGAP00000025367	zf-C2H2	PF00096.26	1.1e-20	3	4
ENSNGAP00000025367	zf-C2H2	PF00096.26	1.1e-20	4	4
ENSNGAP00000025367	zf-met	PF12874.7	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000031087	-	1951	XM_008821793	ENSNGAP00000025367	456 (aa)	XP_008820015	UPI0004ED2DD8
ENSNGAT00000031088	-	1742	XM_008821794	ENSNGAP00000025368	466 (aa)	XP_008820016	UPI0004ED5520

Gene Model

Click here to download ENSNGAG00000023346's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023346	Zic3	100	97.430	ENSG00000156925	ZIC3	100	97.430	Homo_sapiens
ENSNGAG00000023346	Zic3	100	97.859	ENSANAG00000019614	ZIC3	100	97.859	Aotus_nancymaae
ENSNGAG00000023346	Zic3	100	97.430	ENSCJAG00000013792	ZIC3	100	97.430	Callithrix_jacchus
ENSNGAG00000023346	Zic3	100	97.430	ENSCAFG00000018979	ZIC3	100	97.430	Canis_familiaris
ENSNGAG00000023346	Zic3	100	94.861	ENSTSYG00000003356	ZIC3	100	94.861	Carlito_syrichta
ENSNGAG00000023346	Zic3	53	97.967	ENSCPOG00000002374	ZIC3	100	97.967	Cavia_porcellus
ENSNGAG00000023346	Zic3	100	97.645	ENSCCAG00000025983	ZIC3	100	97.645	Cebus_capucinus
ENSNGAG00000023346	Zic3	100	97.430	ENSCATG00000036569	ZIC3	100	97.430	Cercocebus_atys
ENSNGAG00000023346	Zic3	100	98.283	ENSCLAG00000001934	ZIC3	100	98.283	Chinchilla_lanigera
ENSNGAG00000023346	Zic3	93	86.239	ENSCPBG00000026115	ZIC3	100	86.239	Chrysemys_picta_bellii
ENSNGAG00000023346	Zic3	100	97.430	ENSCANG00000017505	ZIC3	100	97.430	Colobus_angolensis_palliatus
ENSNGAG00000023346	Zic3	100	99.142	ENSCGRG00001024527	Zic3	100	99.142	Cricetulus_griseus_chok1gshd
ENSNGAG00000023346	Zic3	100	97.639	ENSDORG00000025481	Zic3	100	97.639	Dipodomys_ordii
ENSNGAG00000023346	Zic3	100	97.430	ENSFCAG00000025684	ZIC3	100	97.430	Felis_catus
ENSNGAG00000023346	Zic3	80	98.652	ENSFDAG00000014929	ZIC3	100	98.780	Fukomys_damarensis
ENSNGAG00000023346	Zic3	95	79.642	ENSGAGG00000004149	ZIC3	92	80.638	Gopherus_agassizii
ENSNGAG00000023346	Zic3	100	97.430	ENSGGOG00000011914	ZIC3	100	97.430	Gorilla_gorilla
ENSNGAG00000023346	Zic3	100	97.854	ENSHGLG00000006298	ZIC3	100	97.854	Heterocephalus_glaber_female
ENSNGAG00000023346	Zic3	67	69.737	ENSHGLG00100002829	ZIC3	100	77.070	Heterocephalus_glaber_male
ENSNGAG00000023346	Zic3	100	98.904	ENSJJAG00000022714	Zic3	100	98.904	Jaculus_jaculus
ENSNGAG00000023346	Zic3	100	76.445	ENSLACG00000014597	ZIC3	100	76.445	Latimeria_chalumnae
ENSNGAG00000023346	Zic3	88	93.431	ENSLAFG00000007048	ZIC3	99	93.431	Loxodonta_africana
ENSNGAG00000023346	Zic3	100	97.430	ENSMFAG00000027018	ZIC3	100	97.430	Macaca_fascicularis
ENSNGAG00000023346	Zic3	100	97.374	ENSMMUG00000002023	ZIC3	100	97.374	Macaca_mulatta
ENSNGAG00000023346	Zic3	100	97.430	ENSMNEG00000040682	ZIC3	100	97.430	Macaca_nemestrina
ENSNGAG00000023346	Zic3	100	97.430	ENSMLEG00000004378	ZIC3	100	97.430	Mandrillus_leucophaeus
ENSNGAG00000023346	Zic3	100	98.927	ENSMAUG00000009402	Zic3	100	98.927	Mesocricetus_auratus
ENSNGAG00000023346	Zic3	100	97.645	ENSMICG00000042529	ZIC3	100	97.645	Microcebus_murinus
ENSNGAG00000023346	Zic3	100	98.498	ENSMOCG00000020544	Zic3	100	98.498	Microtus_ochrogaster
ENSNGAG00000023346	Zic3	100	98.712	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSNGAG00000023346	Zic3	100	98.712	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSNGAG00000023346	Zic3	100	98.712	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSNGAG00000023346	Zic3	100	98.712	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSNGAG00000023346	Zic3	79	97.509	ENSNLEG00000003005	-	100	97.786	Nomascus_leucogenys
ENSNGAG00000023346	Zic3	100	98.069	ENSODEG00000005556	ZIC3	100	98.069	Octodon_degus
ENSNGAG00000023346	Zic3	100	97.430	ENSPPAG00000030013	ZIC3	100	97.430	Pan_paniscus
ENSNGAG00000023346	Zic3	100	97.430	ENSPPRG00000010839	ZIC3	100	97.430	Panthera_pardus
ENSNGAG00000023346	Zic3	100	97.430	ENSPTRG00000043849	ZIC3	100	97.430	Pan_troglodytes
ENSNGAG00000023346	Zic3	100	97.430	ENSPANG00000011357	ZIC3	100	97.430	Papio_anubis
ENSNGAG00000023346	Zic3	100	73.291	ENSPKIG00000017705	zic3	100	73.291	Paramormyrops_kingsleyae
ENSNGAG00000023346	Zic3	62	91.096	ENSPSIG00000011896	ZIC3	99	91.096	Pelodiscus_sinensis
ENSNGAG00000023346	Zic3	100	98.927	ENSPEMG00000022168	Zic3	100	98.927	Peromyscus_maniculatus_bairdii
ENSNGAG00000023346	Zic3	100	97.216	ENSPCOG00000021557	ZIC3	100	97.216	Propithecus_coquereli
ENSNGAG00000023346	Zic3	100	98.283	ENSRNOG00000000861	Zic3	100	98.283	Rattus_norvegicus
ENSNGAG00000023346	Zic3	100	97.430	ENSRBIG00000030660	ZIC3	100	97.430	Rhinopithecus_bieti
ENSNGAG00000023346	Zic3	100	97.430	ENSRROG00000028410	ZIC3	100	97.430	Rhinopithecus_roxellana
ENSNGAG00000023346	Zic3	100	98.073	ENSSBOG00000024684	ZIC3	100	98.073	Saimiri_boliviensis_boliviensis
ENSNGAG00000023346	Zic3	99	74.464	ENSSFOG00015011731	zic3	100	74.464	Scleropages_formosus
ENSNGAG00000023346	Zic3	99	68.670	ENSSFOG00015008079	zic3	100	68.670	Scleropages_formosus
ENSNGAG00000023346	Zic3	83	82.741	ENSTGUG00000002155	ZIC3	100	82.741	Taeniopygia_guttata
ENSNGAG00000023346	Zic3	100	97.430	ENSVVUG00000021378	ZIC3	100	97.430	Vulpes_vulpes
ENSNGAG00000023346	Zic3	100	76.972	ENSXETG00000024458	zic3	100	76.972	Xenopus_tropicalis