EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNGAG00000023702 (Gene tree)
Gene ID: 103743821
Gene Symbol: Rnps1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Minus strand
Length: 11366 bases
Position: chrKL199090.1:146346-157711
Accession: 103743821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000025897	RRM_1	PF00076.22	5.4e-18	1	1
ENSNGAP00000025895	RRM_1	PF00076.22	6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000031619	-	1152	XM_008845313	ENSNGAP00000025895	304 (aa)	XP_008843535	UPI0004ED7049
ENSNGAT00000031621	-	849	-	ENSNGAP00000025897	282 (aa)	-	UPI000007322C

Gene Model

Click here to download ENSNGAG00000023702's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03013	RNA transport	KEGG
ngi03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023702	Rnps1	100	100.000	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
ENSNGAG00000023702	Rnps1	79	69.038	ENSAPOG00000014649	-	85	70.124	Acanthochromis_polyacanthus
ENSNGAG00000023702	Rnps1	100	99.672	ENSAMEG00000017861	RNPS1	100	99.672	Ailuropoda_melanoleuca
ENSNGAG00000023702	Rnps1	76	67.907	ENSACIG00000014367	-	76	66.512	Amphilophus_citrinellus
ENSNGAG00000023702	Rnps1	85	70.417	ENSAOCG00000002404	RNPS1	84	70.417	Amphiprion_ocellaris
ENSNGAG00000023702	Rnps1	85	70.293	ENSAPEG00000006497	RNPS1	81	70.293	Amphiprion_percula
ENSNGAG00000023702	Rnps1	85	72.083	ENSATEG00000024267	RNPS1	84	72.614	Anabas_testudineus
ENSNGAG00000023702	Rnps1	86	65.779	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
ENSNGAG00000023702	Rnps1	76	90.558	ENSACAG00000004088	RNPS1	94	90.558	Anolis_carolinensis
ENSNGAG00000023702	Rnps1	77	96.789	ENSANAG00000029802	-	90	92.469	Aotus_nancymaae
ENSNGAG00000023702	Rnps1	100	99.645	ENSANAG00000028802	RNPS1	100	99.645	Aotus_nancymaae
ENSNGAG00000023702	Rnps1	85	64.583	ENSACLG00000021537	-	96	68.561	Astatotilapia_calliptera
ENSNGAG00000023702	Rnps1	85	75.417	ENSAMXG00000006330	-	84	68.750	Astyanax_mexicanus
ENSNGAG00000023702	Rnps1	100	99.291	ENSBTAG00000009969	RNPS1	100	99.291	Bos_taurus
ENSNGAG00000023702	Rnps1	100	100.000	ENSCJAG00000014969	RNPS1	100	100.000	Callithrix_jacchus
ENSNGAG00000023702	Rnps1	100	99.672	ENSCAFG00000019397	RNPS1	100	99.672	Canis_familiaris
ENSNGAG00000023702	Rnps1	100	99.672	ENSCAFG00020026159	RNPS1	100	99.672	Canis_lupus_dingo
ENSNGAG00000023702	Rnps1	72	99.510	ENSCHIG00000014621	-	69	99.024	Capra_hircus
ENSNGAG00000023702	Rnps1	79	95.041	ENSTSYG00000031848	-	98	95.000	Carlito_syrichta
ENSNGAG00000023702	Rnps1	100	100.000	ENSTSYG00000001629	RNPS1	100	100.000	Carlito_syrichta
ENSNGAG00000023702	Rnps1	100	99.344	ENSCAPG00000007731	RNPS1	100	99.344	Cavia_aperea
ENSNGAG00000023702	Rnps1	100	99.645	ENSCPOG00000002066	RNPS1	100	99.645	Cavia_porcellus
ENSNGAG00000023702	Rnps1	100	99.645	ENSCCAG00000034480	RNPS1	100	99.645	Cebus_capucinus
ENSNGAG00000023702	Rnps1	95	89.925	ENSCATG00000042361	-	87	93.487	Cercocebus_atys
ENSNGAG00000023702	Rnps1	100	100.000	ENSCATG00000013756	RNPS1	100	100.000	Cercocebus_atys
ENSNGAG00000023702	Rnps1	100	99.645	ENSCLAG00000015546	RNPS1	100	99.645	Chinchilla_lanigera
ENSNGAG00000023702	Rnps1	100	97.163	ENSCSAG00000005219	-	95	97.163	Chlorocebus_sabaeus
ENSNGAG00000023702	Rnps1	100	98.033	ENSCHOG00000004866	RNPS1	100	98.033	Choloepus_hoffmanni
ENSNGAG00000023702	Rnps1	79	63.333	ENSCPBG00000000214	RNPS1	73	63.889	Chrysemys_picta_bellii
ENSNGAG00000023702	Rnps1	100	100.000	ENSCANG00000041307	RNPS1	100	100.000	Colobus_angolensis_palliatus
ENSNGAG00000023702	Rnps1	72	85.577	ENSCANG00000030189	-	79	70.192	Colobus_angolensis_palliatus
ENSNGAG00000023702	Rnps1	100	100.000	ENSCGRG00001020431	Rnps1	100	100.000	Cricetulus_griseus_chok1gshd
ENSNGAG00000023702	Rnps1	100	99.291	ENSCGRG00000014021	Rnps1	80	99.587	Cricetulus_griseus_crigri
ENSNGAG00000023702	Rnps1	85	71.250	ENSCSEG00000000402	RNPS1	85	68.702	Cynoglossus_semilaevis
ENSNGAG00000023702	Rnps1	85	69.874	ENSCSEG00000015997	RNPS1	82	69.874	Cynoglossus_semilaevis
ENSNGAG00000023702	Rnps1	77	70.968	ENSCVAG00000010868	RNPS1	75	64.815	Cyprinodon_variegatus
ENSNGAG00000023702	Rnps1	85	63.750	ENSDARG00000116743	rnps1	84	69.710	Danio_rerio
ENSNGAG00000023702	Rnps1	85	63.750	ENSDARG00000100188	RNPS1	84	69.710	Danio_rerio
ENSNGAG00000023702	Rnps1	70	73.469	ENSDNOG00000038751	-	99	72.727	Dasypus_novemcinctus
ENSNGAG00000023702	Rnps1	100	99.672	ENSDNOG00000016081	RNPS1	100	99.672	Dasypus_novemcinctus
ENSNGAG00000023702	Rnps1	100	99.291	ENSDORG00000001755	Rnps1	100	99.291	Dipodomys_ordii
ENSNGAG00000023702	Rnps1	100	99.672	ENSEASG00005004862	RNPS1	100	99.672	Equus_asinus_asinus
ENSNGAG00000023702	Rnps1	81	93.145	ENSECAG00000023288	RNPS1	83	97.835	Equus_caballus
ENSNGAG00000023702	Rnps1	100	80.656	ENSEEUG00000005933	RNPS1	100	80.656	Erinaceus_europaeus
ENSNGAG00000023702	Rnps1	100	99.645	ENSFCAG00000007690	RNPS1	100	99.645	Felis_catus
ENSNGAG00000023702	Rnps1	85	95.397	ENSFALG00000004868	RNPS1	85	95.417	Ficedula_albicollis
ENSNGAG00000023702	Rnps1	100	99.291	ENSFDAG00000003386	RNPS1	100	99.291	Fukomys_damarensis
ENSNGAG00000023702	Rnps1	77	70.833	ENSFHEG00000011705	RNPS1	75	71.429	Fundulus_heteroclitus
ENSNGAG00000023702	Rnps1	85	95.417	ENSGALG00000009288	RNPS1	85	95.417	Gallus_gallus
ENSNGAG00000023702	Rnps1	85	68.465	ENSGACG00000005641	-	84	68.465	Gasterosteus_aculeatus
ENSNGAG00000023702	Rnps1	85	94.142	ENSGAGG00000010452	RNPS1	86	92.776	Gopherus_agassizii
ENSNGAG00000023702	Rnps1	73	98.068	ENSGGOG00000026421	-	79	98.068	Gorilla_gorilla
ENSNGAG00000023702	Rnps1	100	100.000	ENSGGOG00000014275	RNPS1	100	100.000	Gorilla_gorilla
ENSNGAG00000023702	Rnps1	79	64.730	ENSHBUG00000017337	-	84	72.199	Haplochromis_burtoni
ENSNGAG00000023702	Rnps1	100	100.000	ENSHGLG00000013957	RNPS1	100	100.000	Heterocephalus_glaber_female
ENSNGAG00000023702	Rnps1	79	95.982	ENSHGLG00000006292	-	97	94.737	Heterocephalus_glaber_female
ENSNGAG00000023702	Rnps1	100	100.000	ENSHGLG00100003539	RNPS1	100	100.000	Heterocephalus_glaber_male
ENSNGAG00000023702	Rnps1	73	92.683	ENSHGLG00100011610	-	84	92.683	Heterocephalus_glaber_male
ENSNGAG00000023702	Rnps1	92	94.231	ENSHGLG00100015267	-	80	95.495	Heterocephalus_glaber_male
ENSNGAG00000023702	Rnps1	80	83.265	ENSHGLG00100017879	-	80	70.248	Heterocephalus_glaber_male
ENSNGAG00000023702	Rnps1	99	85.053	ENSSTOG00000013200	RNPS1	100	87.869	Ictidomys_tridecemlineatus
ENSNGAG00000023702	Rnps1	100	99.645	ENSJJAG00000015576	-	100	99.645	Jaculus_jaculus
ENSNGAG00000023702	Rnps1	85	82.845	ENSJJAG00000019234	-	68	79.498	Jaculus_jaculus
ENSNGAG00000023702	Rnps1	85	71.784	ENSKMAG00000009135	RNPS1	84	67.220	Kryptolebias_marmoratus
ENSNGAG00000023702	Rnps1	85	87.917	ENSLACG00000007112	RNPS1	85	87.917	Latimeria_chalumnae
ENSNGAG00000023702	Rnps1	85	67.500	ENSLOCG00000001758	RNPS1	84	83.333	Lepisosteus_oculatus
ENSNGAG00000023702	Rnps1	86	89.313	ENSMFAG00000044121	-	83	83.265	Macaca_fascicularis
ENSNGAG00000023702	Rnps1	100	100.000	ENSMFAG00000042142	RNPS1	100	100.000	Macaca_fascicularis
ENSNGAG00000023702	Rnps1	72	100.000	ENSMMUG00000019238	-	80	100.000	Macaca_mulatta
ENSNGAG00000023702	Rnps1	88	94.382	ENSMMUG00000041726	-	92	94.275	Macaca_mulatta
ENSNGAG00000023702	Rnps1	88	94.757	ENSMNEG00000024827	-	92	94.656	Macaca_nemestrina
ENSNGAG00000023702	Rnps1	73	93.237	ENSMLEG00000040232	-	81	93.237	Mandrillus_leucophaeus
ENSNGAG00000023702	Rnps1	100	100.000	ENSMLEG00000036928	RNPS1	100	100.000	Mandrillus_leucophaeus
ENSNGAG00000023702	Rnps1	85	70.000	ENSMAMG00000021609	-	84	70.539	Mastacembelus_armatus
ENSNGAG00000023702	Rnps1	85	74.583	ENSMAMG00000021148	-	88	68.462	Mastacembelus_armatus
ENSNGAG00000023702	Rnps1	85	64.730	ENSMZEG00005006256	-	85	72.199	Maylandia_zebra
ENSNGAG00000023702	Rnps1	78	94.977	ENSMGAG00000010042	RNPS1	98	94.492	Meleagris_gallopavo
ENSNGAG00000023702	Rnps1	100	99.291	ENSMICG00000031543	RNPS1	100	99.291	Microcebus_murinus
ENSNGAG00000023702	Rnps1	100	100.000	ENSMOCG00000003429	Rnps1	100	100.000	Microtus_ochrogaster
ENSNGAG00000023702	Rnps1	76	66.512	ENSMMOG00000010863	RNPS1	75	65.116	Mola_mola
ENSNGAG00000023702	Rnps1	100	97.386	ENSMODG00000015891	RNPS1	100	97.386	Monodelphis_domestica
ENSNGAG00000023702	Rnps1	100	100.000	ENSMUSG00000034681	Rnps1	100	100.000	Mus_musculus
ENSNGAG00000023702	Rnps1	100	100.000	MGP_PahariEiJ_G0023498	Rnps1	100	100.000	Mus_pahari
ENSNGAG00000023702	Rnps1	100	100.000	MGP_SPRETEiJ_G0022092	Rnps1	100	100.000	Mus_spretus
ENSNGAG00000023702	Rnps1	100	99.672	ENSMLUG00000016808	RNPS1	100	99.672	Myotis_lucifugus
ENSNGAG00000023702	Rnps1	76	67.907	ENSNBRG00000023437	RNPS1	75	66.512	Neolamprologus_brichardi
ENSNGAG00000023702	Rnps1	81	63.821	ENSNBRG00000014540	-	92	69.020	Neolamprologus_brichardi
ENSNGAG00000023702	Rnps1	89	97.794	ENSNLEG00000009243	RNPS1	100	97.992	Nomascus_leucogenys
ENSNGAG00000023702	Rnps1	100	96.393	ENSMEUG00000008882	RNPS1	100	96.393	Notamacropus_eugenii
ENSNGAG00000023702	Rnps1	100	96.393	ENSOPRG00000016422	RNPS1	100	96.393	Ochotona_princeps
ENSNGAG00000023702	Rnps1	57	66.250	ENSODEG00000017258	-	77	64.516	Octodon_degus
ENSNGAG00000023702	Rnps1	58	64.634	ENSODEG00000002513	-	54	64.516	Octodon_degus
ENSNGAG00000023702	Rnps1	85	70.000	ENSORLG00015011183	RNPS1	81	66.160	Oryzias_latipes_hsok
ENSNGAG00000023702	Rnps1	95	98.966	ENSOARG00000018056	-	81	98.966	Ovis_aries
ENSNGAG00000023702	Rnps1	75	98.684	ENSPPAG00000037836	-	96	98.684	Pan_paniscus
ENSNGAG00000023702	Rnps1	100	93.262	ENSPPAG00000011845	RNPS1	100	93.262	Pan_paniscus
ENSNGAG00000023702	Rnps1	100	99.645	ENSPPRG00000011255	RNPS1	100	99.645	Panthera_pardus
ENSNGAG00000023702	Rnps1	63	97.500	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
ENSNGAG00000023702	Rnps1	100	99.645	ENSPTRG00000031310	RNPS1	100	99.645	Pan_troglodytes
ENSNGAG00000023702	Rnps1	78	93.305	ENSPTRG00000046326	-	91	93.305	Pan_troglodytes
ENSNGAG00000023702	Rnps1	100	100.000	ENSPANG00000015748	RNPS1	100	100.000	Papio_anubis
ENSNGAG00000023702	Rnps1	73	72.947	ENSPANG00000033576	-	75	74.129	Papio_anubis
ENSNGAG00000023702	Rnps1	85	80.083	ENSPKIG00000023465	RNPS1	85	80.083	Paramormyrops_kingsleyae
ENSNGAG00000023702	Rnps1	85	94.142	ENSPSIG00000006048	RNPS1	86	92.395	Pelodiscus_sinensis
ENSNGAG00000023702	Rnps1	100	100.000	ENSPEMG00000012797	Rnps1	100	100.000	Peromyscus_maniculatus_bairdii
ENSNGAG00000023702	Rnps1	100	98.227	ENSPCIG00000025012	RNPS1	100	98.227	Phascolarctos_cinereus
ENSNGAG00000023702	Rnps1	61	88.742	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
ENSNGAG00000023702	Rnps1	77	67.742	ENSPFOG00000009978	RNPS1	75	63.889	Poecilia_formosa
ENSNGAG00000023702	Rnps1	77	67.742	ENSPLAG00000009343	RNPS1	75	63.889	Poecilia_latipinna
ENSNGAG00000023702	Rnps1	77	67.742	ENSPMEG00000008552	RNPS1	75	63.889	Poecilia_mexicana
ENSNGAG00000023702	Rnps1	77	67.742	ENSPREG00000001843	RNPS1	75	63.889	Poecilia_reticulata
ENSNGAG00000023702	Rnps1	100	97.377	ENSPCAG00000004514	RNPS1	100	97.377	Procavia_capensis
ENSNGAG00000023702	Rnps1	100	99.645	ENSPCOG00000005478	RNPS1	100	99.645	Propithecus_coquereli
ENSNGAG00000023702	Rnps1	100	99.344	ENSPVAG00000005105	RNPS1	100	99.344	Pteropus_vampyrus
ENSNGAG00000023702	Rnps1	85	76.250	ENSPNAG00000025479	RNPS1	84	69.583	Pygocentrus_nattereri
ENSNGAG00000023702	Rnps1	100	99.344	ENSRNOG00000008703	Rnps1	100	99.344	Rattus_norvegicus
ENSNGAG00000023702	Rnps1	99	99.288	ENSRBIG00000038965	-	99	99.288	Rhinopithecus_bieti
ENSNGAG00000023702	Rnps1	89	99.632	ENSRROG00000041252	RNPS1	97	96.218	Rhinopithecus_roxellana
ENSNGAG00000023702	Rnps1	100	100.000	ENSSBOG00000027927	RNPS1	100	100.000	Saimiri_boliviensis_boliviensis
ENSNGAG00000023702	Rnps1	100	97.705	ENSSHAG00000016951	RNPS1	100	97.705	Sarcophilus_harrisii
ENSNGAG00000023702	Rnps1	85	76.987	ENSSFOG00015019341	-	76	68.724	Scleropages_formosus
ENSNGAG00000023702	Rnps1	85	73.444	ENSSFOG00015022746	RNPS1	87	67.500	Scleropages_formosus
ENSNGAG00000023702	Rnps1	85	70.833	ENSSDUG00000011453	RNPS1	84	71.369	Seriola_dumerili
ENSNGAG00000023702	Rnps1	82	65.217	ENSSLDG00000021341	RNPS1	76	67.647	Seriola_lalandi_dorsalis
ENSNGAG00000023702	Rnps1	79	96.694	ENSSARG00000001577	RNPS1	86	96.694	Sorex_araneus
ENSNGAG00000023702	Rnps1	86	93.156	ENSSPUG00000016588	RNPS1	86	93.156	Sphenodon_punctatus
ENSNGAG00000023702	Rnps1	100	99.344	ENSSSCG00000008048	RNPS1	100	99.344	Sus_scrofa
ENSNGAG00000023702	Rnps1	85	94.979	ENSTGUG00000003237	RNPS1	85	95.000	Taeniopygia_guttata
ENSNGAG00000023702	Rnps1	85	71.784	ENSTRUG00000008602	RNPS1	84	71.784	Takifugu_rubripes
ENSNGAG00000023702	Rnps1	85	72.083	ENSTNIG00000009753	RNPS1	84	72.016	Tetraodon_nigroviridis
ENSNGAG00000023702	Rnps1	89	99.632	ENSTBEG00000009098	RNPS1	100	99.632	Tupaia_belangeri
ENSNGAG00000023702	Rnps1	100	99.672	ENSTTRG00000008220	RNPS1	100	99.672	Tursiops_truncatus
ENSNGAG00000023702	Rnps1	89	99.634	ENSUAMG00000004462	RNPS1	100	99.634	Ursus_americanus
ENSNGAG00000023702	Rnps1	100	99.672	ENSUMAG00000022327	RNPS1	100	99.672	Ursus_maritimus
ENSNGAG00000023702	Rnps1	100	99.672	ENSVVUG00000009244	RNPS1	100	99.672	Vulpes_vulpes
ENSNGAG00000023702	Rnps1	81	72.174	ENSXETG00000024439	rnps1	70	74.654	Xenopus_tropicalis
ENSNGAG00000023702	Rnps1	85	67.635	ENSXMAG00000004827	RNPS1	84	64.167	Xiphophorus_maculatus