EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000023992 (Gene tree)
Gene ID: 103740002
Gene Symbol: Pabpn1l
Alias: LOC382035|ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 3064 bases
Position: chrKL202052.1:661294-664357
Accession: 103740002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000026308	RRM_1	PF00076.22	6.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000032036	-	879	XM_008840536	ENSNGAP00000026308	272 (aa)	XP_008838758	UPI0004ED5A65

Gene Model

Click here to download ENSNGAG00000023992's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03015	mRNA surveillance pathway	KEGG
ngi05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000023992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000023992	Pabpn1l	51	59.184	ENSNGAG00000019529	Gm20521	57	50.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000023992	Pabpn1l	100	69.534	ENSG00000205022	PABPN1L	100	70.968	Homo_sapiens
ENSNGAG00000023992	Pabpn1l	50	55.882	ENSAPOG00000000685	PABPN1L	59	47.872	Acanthochromis_polyacanthus
ENSNGAG00000023992	Pabpn1l	56	53.503	ENSACIG00000021400	PABPN1L	87	53.503	Amphilophus_citrinellus
ENSNGAG00000023992	Pabpn1l	64	45.714	ENSAOCG00000019844	PABPN1L	76	44.860	Amphiprion_ocellaris
ENSNGAG00000023992	Pabpn1l	64	45.714	ENSAPEG00000019534	PABPN1L	76	44.860	Amphiprion_percula
ENSNGAG00000023992	Pabpn1l	50	58.519	ENSATEG00000011646	PABPN1L	70	49.474	Anabas_testudineus
ENSNGAG00000023992	Pabpn1l	71	55.155	ENSACAG00000013250	PABPN1L	99	55.155	Anolis_carolinensis
ENSNGAG00000023992	Pabpn1l	100	67.148	ENSANAG00000038178	PABPN1L	100	68.116	Aotus_nancymaae
ENSNGAG00000023992	Pabpn1l	53	54.110	ENSACLG00000025147	PABPN1L	76	43.602	Astatotilapia_calliptera
ENSNGAG00000023992	Pabpn1l	55	55.034	ENSAMXG00000010873	PABPN1L	65	52.841	Astyanax_mexicanus
ENSNGAG00000023992	Pabpn1l	52	78.014	ENSBTAG00000006727	-	86	78.014	Bos_taurus
ENSNGAG00000023992	Pabpn1l	100	67.384	ENSBTAG00000023752	-	100	68.817	Bos_taurus
ENSNGAG00000023992	Pabpn1l	100	65.217	ENSCJAG00000045284	PABPN1L	100	68.592	Callithrix_jacchus
ENSNGAG00000023992	Pabpn1l	100	62.414	ENSCHIG00000013987	PABPN1L	100	62.414	Capra_hircus
ENSNGAG00000023992	Pabpn1l	95	67.790	ENSCAPG00000007240	PABPN1L	100	67.790	Cavia_aperea
ENSNGAG00000023992	Pabpn1l	100	70.330	ENSCPOG00000025951	PABPN1L	100	70.330	Cavia_porcellus
ENSNGAG00000023992	Pabpn1l	100	66.304	ENSCCAG00000027631	PABPN1L	100	68.478	Cebus_capucinus
ENSNGAG00000023992	Pabpn1l	100	71.273	ENSCATG00000031060	PABPN1L	100	73.913	Cercocebus_atys
ENSNGAG00000023992	Pabpn1l	100	71.691	ENSCLAG00000000704	PABPN1L	100	71.691	Chinchilla_lanigera
ENSNGAG00000023992	Pabpn1l	100	68.836	ENSCSAG00000002881	PABPN1L	100	70.548	Chlorocebus_sabaeus
ENSNGAG00000023992	Pabpn1l	71	54.592	ENSCPBG00000023441	PABPN1L	61	56.345	Chrysemys_picta_bellii
ENSNGAG00000023992	Pabpn1l	100	67.029	ENSCANG00000039336	PABPN1L	100	70.036	Colobus_angolensis_palliatus
ENSNGAG00000023992	Pabpn1l	100	80.364	ENSCGRG00001013211	Pabpn1l	100	83.273	Cricetulus_griseus_chok1gshd
ENSNGAG00000023992	Pabpn1l	100	80.364	ENSCGRG00000015868	Pabpn1l	100	83.273	Cricetulus_griseus_crigri
ENSNGAG00000023992	Pabpn1l	100	55.477	ENSDNOG00000034677	PABPN1L	100	60.071	Dasypus_novemcinctus
ENSNGAG00000023992	Pabpn1l	100	69.091	ENSEASG00005000777	PABPN1L	100	69.091	Equus_asinus_asinus
ENSNGAG00000023992	Pabpn1l	100	70.545	ENSECAG00000000378	PABPN1L	100	70.545	Equus_caballus
ENSNGAG00000023992	Pabpn1l	100	60.662	ENSEEUG00000004747	PABPN1L	100	60.662	Erinaceus_europaeus
ENSNGAG00000023992	Pabpn1l	64	50.286	ENSELUG00000018385	PABPN1L	76	46.729	Esox_lucius
ENSNGAG00000023992	Pabpn1l	100	67.742	ENSFCAG00000010465	PABPN1L	100	67.742	Felis_catus
ENSNGAG00000023992	Pabpn1l	72	56.784	ENSFALG00000003319	PABPN1L	98	49.603	Ficedula_albicollis
ENSNGAG00000023992	Pabpn1l	100	72.059	ENSFDAG00000021067	PABPN1L	100	72.059	Fukomys_damarensis
ENSNGAG00000023992	Pabpn1l	60	47.531	ENSFHEG00000018295	PABPN1L	73	47.475	Fundulus_heteroclitus
ENSNGAG00000023992	Pabpn1l	54	63.758	ENSGALG00000006242	PABPN1L	85	63.758	Gallus_gallus
ENSNGAG00000023992	Pabpn1l	68	47.120	ENSGACG00000015428	PABPN1L	70	45.161	Gasterosteus_aculeatus
ENSNGAG00000023992	Pabpn1l	67	55.249	ENSGAGG00000010613	PABPN1L	60	55.249	Gopherus_agassizii
ENSNGAG00000023992	Pabpn1l	100	70.909	ENSGGOG00000012670	PABPN1L	100	72.826	Gorilla_gorilla
ENSNGAG00000023992	Pabpn1l	53	54.110	ENSHBUG00000002388	PABPN1L	76	45.283	Haplochromis_burtoni
ENSNGAG00000023992	Pabpn1l	96	73.462	ENSHGLG00000014207	PABPN1L	100	73.462	Heterocephalus_glaber_female
ENSNGAG00000023992	Pabpn1l	96	73.462	ENSHGLG00100005230	PABPN1L	100	73.462	Heterocephalus_glaber_male
ENSNGAG00000023992	Pabpn1l	100	67.384	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSNGAG00000023992	Pabpn1l	100	76.727	ENSJJAG00000006433	Pabpn1l	100	76.727	Jaculus_jaculus
ENSNGAG00000023992	Pabpn1l	64	46.286	ENSLBEG00000011647	PABPN1L	69	43.836	Labrus_bergylta
ENSNGAG00000023992	Pabpn1l	71	65.816	ENSLAFG00000025902	-	78	65.816	Loxodonta_africana
ENSNGAG00000023992	Pabpn1l	100	70.182	ENSMFAG00000002924	PABPN1L	100	72.826	Macaca_fascicularis
ENSNGAG00000023992	Pabpn1l	100	69.818	ENSMMUG00000012438	PABPN1L	100	72.464	Macaca_mulatta
ENSNGAG00000023992	Pabpn1l	100	70.182	ENSMNEG00000044808	PABPN1L	100	72.826	Macaca_nemestrina
ENSNGAG00000023992	Pabpn1l	100	70.909	ENSMLEG00000032667	PABPN1L	100	73.551	Mandrillus_leucophaeus
ENSNGAG00000023992	Pabpn1l	53	54.110	ENSMZEG00005002186	PABPN1L	76	43.602	Maylandia_zebra
ENSNGAG00000023992	Pabpn1l	100	80.515	ENSMAUG00000014032	Pabpn1l	100	82.129	Mesocricetus_auratus
ENSNGAG00000023992	Pabpn1l	100	71.273	ENSMICG00000028179	PABPN1L	100	71.273	Microcebus_murinus
ENSNGAG00000023992	Pabpn1l	100	78.676	ENSMOCG00000007955	Pabpn1l	100	78.676	Microtus_ochrogaster
ENSNGAG00000023992	Pabpn1l	100	53.763	ENSMODG00000003873	-	100	53.763	Monodelphis_domestica
ENSNGAG00000023992	Pabpn1l	65	47.753	ENSMALG00000016926	PABPN1L	76	45.833	Monopterus_albus
ENSNGAG00000023992	Pabpn1l	100	76.642	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	76.642	Mus_caroli
ENSNGAG00000023992	Pabpn1l	100	75.912	ENSMUSG00000069867	Pabpn1l	100	75.912	Mus_musculus
ENSNGAG00000023992	Pabpn1l	100	76.642	MGP_PahariEiJ_G0023268	Pabpn1l	100	76.642	Mus_pahari
ENSNGAG00000023992	Pabpn1l	100	75.547	MGP_SPRETEiJ_G0032788	Pabpn1l	100	75.547	Mus_spretus
ENSNGAG00000023992	Pabpn1l	96	51.439	ENSMLUG00000003228	PABPN1L	95	51.439	Myotis_lucifugus
ENSNGAG00000023992	Pabpn1l	53	54.110	ENSNBRG00000017078	PABPN1L	74	48.370	Neolamprologus_brichardi
ENSNGAG00000023992	Pabpn1l	100	71.795	ENSOPRG00000005597	PABPN1L	100	71.795	Ochotona_princeps
ENSNGAG00000023992	Pabpn1l	100	64.460	ENSODEG00000004649	PABPN1L	100	64.460	Octodon_degus
ENSNGAG00000023992	Pabpn1l	100	53.763	ENSOANG00000013901	PABPN1L	100	54.945	Ornithorhynchus_anatinus
ENSNGAG00000023992	Pabpn1l	74	49.254	ENSORLG00000026560	PABPN1L	71	49.254	Oryzias_latipes
ENSNGAG00000023992	Pabpn1l	74	49.254	ENSORLG00020015068	PABPN1L	71	49.254	Oryzias_latipes_hni
ENSNGAG00000023992	Pabpn1l	74	49.254	ENSORLG00015000397	PABPN1L	71	49.254	Oryzias_latipes_hsok
ENSNGAG00000023992	Pabpn1l	78	46.729	ENSOMEG00000017896	PABPN1L	55	46.729	Oryzias_melastigma
ENSNGAG00000023992	Pabpn1l	100	70.909	ENSOGAG00000000433	PABPN1L	100	72.364	Otolemur_garnettii
ENSNGAG00000023992	Pabpn1l	100	64.686	ENSOARG00000013682	PABPN1L	100	66.337	Ovis_aries
ENSNGAG00000023992	Pabpn1l	100	70.251	ENSPPAG00000028866	PABPN1L	100	71.685	Pan_paniscus
ENSNGAG00000023992	Pabpn1l	100	68.100	ENSPPRG00000015106	PABPN1L	100	68.100	Panthera_pardus
ENSNGAG00000023992	Pabpn1l	93	61.479	ENSPTIG00000015606	PABPN1L	100	61.479	Panthera_tigris_altaica
ENSNGAG00000023992	Pabpn1l	100	70.251	ENSPTRG00000031120	PABPN1L	100	71.685	Pan_troglodytes
ENSNGAG00000023992	Pabpn1l	100	70.182	ENSPANG00000026039	PABPN1L	100	72.826	Papio_anubis
ENSNGAG00000023992	Pabpn1l	71	51.691	ENSPSIG00000003404	PABPN1L	100	53.333	Pelodiscus_sinensis
ENSNGAG00000023992	Pabpn1l	50	57.353	ENSPMGG00000013927	PABPN1L	65	62.162	Periophthalmus_magnuspinnatus
ENSNGAG00000023992	Pabpn1l	100	81.250	ENSPEMG00000016624	Pabpn1l	100	81.250	Peromyscus_maniculatus_bairdii
ENSNGAG00000023992	Pabpn1l	52	63.014	ENSPCIG00000007038	-	99	63.014	Phascolarctos_cinereus
ENSNGAG00000023992	Pabpn1l	100	70.863	ENSPPYG00000007655	PABPN1L	100	73.118	Pongo_abelii
ENSNGAG00000023992	Pabpn1l	100	71.273	ENSPCOG00000024077	PABPN1L	100	72.727	Propithecus_coquereli
ENSNGAG00000023992	Pabpn1l	100	66.667	ENSPVAG00000002716	PABPN1L	100	67.021	Pteropus_vampyrus
ENSNGAG00000023992	Pabpn1l	53	54.110	ENSPNYG00000004803	PABPN1L	76	43.602	Pundamilia_nyererei
ENSNGAG00000023992	Pabpn1l	100	79.779	ENSRNOG00000029558	Pabpn1l	100	79.779	Rattus_norvegicus
ENSNGAG00000023992	Pabpn1l	100	71.636	ENSRBIG00000030740	PABPN1L	100	74.275	Rhinopithecus_bieti
ENSNGAG00000023992	Pabpn1l	99	69.708	ENSRROG00000035483	-	99	72.000	Rhinopithecus_roxellana
ENSNGAG00000023992	Pabpn1l	100	71.377	ENSRROG00000032240	-	100	73.551	Rhinopithecus_roxellana
ENSNGAG00000023992	Pabpn1l	100	67.391	ENSSBOG00000018410	PABPN1L	100	70.397	Saimiri_boliviensis_boliviensis
ENSNGAG00000023992	Pabpn1l	100	48.980	ENSSHAG00000010001	-	100	49.655	Sarcophilus_harrisii
ENSNGAG00000023992	Pabpn1l	64	46.286	ENSSDUG00000006986	PABPN1L	76	43.868	Seriola_dumerili
ENSNGAG00000023992	Pabpn1l	64	46.286	ENSSLDG00000021845	PABPN1L	76	43.868	Seriola_lalandi_dorsalis
ENSNGAG00000023992	Pabpn1l	85	54.310	ENSSARG00000005178	-	92	54.310	Sorex_araneus
ENSNGAG00000023992	Pabpn1l	71	57.513	ENSSPUG00000007031	PABPN1L	84	57.732	Sphenodon_punctatus
ENSNGAG00000023992	Pabpn1l	76	43.269	ENSSPAG00000017978	PABPN1L	76	44.498	Stegastes_partitus
ENSNGAG00000023992	Pabpn1l	100	69.455	ENSSSCG00000036367	PABPN1L	100	69.675	Sus_scrofa
ENSNGAG00000023992	Pabpn1l	100	65.108	ENSTTRG00000004691	PABPN1L	100	67.742	Tursiops_truncatus
ENSNGAG00000023992	Pabpn1l	60	50.588	ENSXETG00000011258	pabpn1l	96	48.372	Xenopus_tropicalis