EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNGAG00000024213 (Gene tree)
Gene ID: 103730311
Gene Symbol: Rad54l
Alias: RAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Nannospalax_galili
Status: putative
Strand: Plus strand
Length: 24461 bases
Position: chrKL199784.1:702770-727230
Accession: 103730311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNGAP00000026619	ResIII	PF04851.15	1.8e-08	1	1
ENSNGAP00000026620	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNGAT00000032351	-	2967	XM_008828510	ENSNGAP00000026619	746 (aa)	XP_008826732	UPI0004ED108E
ENSNGAT00000032352	-	2241	-	ENSNGAP00000026620	746 (aa)	-	-

Gene Model

Click here to download ENSNGAG00000024213's gene model file

Pathways

Pathway ID	Pathway Name	Source
ngi03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNGAG00000024213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNGAG00000024213	Rad54l	71	31.229	ENSNGAG00000016174	Ercc6l2	83	31.063
ENSNGAG00000024213	Rad54l	66	31.746	ENSNGAG00000019957	-	54	31.548
ENSNGAG00000024213	Rad54l	82	45.344	ENSNGAG00000017537	Rad54b	71	45.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNGAG00000024213	Rad54l	99	92.895	ENSG00000085999	RAD54L	100	98.667	Homo_sapiens
ENSNGAG00000024213	Rad54l	99	77.120	ENSAPOG00000011643	rad54l	99	77.120	Acanthochromis_polyacanthus
ENSNGAG00000024213	Rad54l	99	92.463	ENSAMEG00000013902	RAD54L	99	92.463	Ailuropoda_melanoleuca
ENSNGAG00000024213	Rad54l	99	77.419	ENSACIG00000001939	rad54l	99	77.419	Amphilophus_citrinellus
ENSNGAG00000024213	Rad54l	99	80.242	ENSAOCG00000017576	rad54l	99	80.242	Amphiprion_ocellaris
ENSNGAG00000024213	Rad54l	95	81.702	ENSAPEG00000020658	rad54l	97	81.702	Amphiprion_percula
ENSNGAG00000024213	Rad54l	94	81.818	ENSATEG00000006767	rad54l	99	81.818	Anabas_testudineus
ENSNGAG00000024213	Rad54l	94	85.470	ENSAPLG00000006389	RAD54L	99	85.470	Anas_platyrhynchos
ENSNGAG00000024213	Rad54l	99	82.329	ENSACAG00000002312	RAD54L	99	82.329	Anolis_carolinensis
ENSNGAG00000024213	Rad54l	99	92.627	ENSANAG00000035439	RAD54L	99	92.627	Aotus_nancymaae
ENSNGAG00000024213	Rad54l	99	76.779	ENSACLG00000018711	rad54l	99	76.779	Astatotilapia_calliptera
ENSNGAG00000024213	Rad54l	99	79.625	ENSAMXG00000012777	rad54l	99	79.625	Astyanax_mexicanus
ENSNGAG00000024213	Rad54l	100	93.048	ENSBTAG00000019901	RAD54L	99	93.048	Bos_taurus
ENSNGAG00000024213	Rad54l	93	58.537	WBGene00004298	rad-54	84	58.537	Caenorhabditis_elegans
ENSNGAG00000024213	Rad54l	99	90.495	ENSCJAG00000021080	RAD54L	94	92.540	Callithrix_jacchus
ENSNGAG00000024213	Rad54l	99	92.225	ENSCAFG00000004272	RAD54L	99	92.225	Canis_familiaris
ENSNGAG00000024213	Rad54l	99	92.328	ENSCAFG00020015066	RAD54L	99	92.328	Canis_lupus_dingo
ENSNGAG00000024213	Rad54l	99	92.771	ENSCHIG00000020118	RAD54L	99	92.771	Capra_hircus
ENSNGAG00000024213	Rad54l	99	93.307	ENSTSYG00000002032	RAD54L	99	93.307	Carlito_syrichta
ENSNGAG00000024213	Rad54l	100	93.173	ENSCPOG00000006768	RAD54L	99	93.173	Cavia_porcellus
ENSNGAG00000024213	Rad54l	99	93.566	ENSCCAG00000025783	RAD54L	99	93.566	Cebus_capucinus
ENSNGAG00000024213	Rad54l	99	93.164	ENSCATG00000030589	RAD54L	99	93.164	Cercocebus_atys
ENSNGAG00000024213	Rad54l	100	94.110	ENSCLAG00000004645	RAD54L	99	94.110	Chinchilla_lanigera
ENSNGAG00000024213	Rad54l	99	93.029	ENSCSAG00000001229	RAD54L	99	93.029	Chlorocebus_sabaeus
ENSNGAG00000024213	Rad54l	99	84.605	ENSCPBG00000005675	RAD54L	99	84.605	Chrysemys_picta_bellii
ENSNGAG00000024213	Rad54l	99	62.934	ENSCING00000024456	-	99	62.853	Ciona_intestinalis
ENSNGAG00000024213	Rad54l	99	62.549	ENSCSAVG00000010859	-	99	62.468	Ciona_savignyi
ENSNGAG00000024213	Rad54l	99	93.298	ENSCANG00000034891	RAD54L	99	93.298	Colobus_angolensis_palliatus
ENSNGAG00000024213	Rad54l	100	93.842	ENSCGRG00001014807	Rad54l	100	93.842	Cricetulus_griseus_chok1gshd
ENSNGAG00000024213	Rad54l	100	93.842	ENSCGRG00000016038	Rad54l	100	93.842	Cricetulus_griseus_crigri
ENSNGAG00000024213	Rad54l	99	77.584	ENSCSEG00000001983	rad54l	99	77.584	Cynoglossus_semilaevis
ENSNGAG00000024213	Rad54l	87	81.818	ENSCVAG00000019561	rad54l	99	81.818	Cyprinodon_variegatus
ENSNGAG00000024213	Rad54l	99	78.983	ENSDARG00000018623	rad54l	99	78.983	Danio_rerio
ENSNGAG00000024213	Rad54l	100	91.566	ENSDNOG00000003395	RAD54L	100	91.566	Dasypus_novemcinctus
ENSNGAG00000024213	Rad54l	99	83.487	ENSDORG00000002632	Rad54l	99	83.487	Dipodomys_ordii
ENSNGAG00000024213	Rad54l	99	55.053	FBgn0002989	okr	95	55.053	Drosophila_melanogaster
ENSNGAG00000024213	Rad54l	78	91.703	ENSETEG00000000550	RAD54L	78	91.703	Echinops_telfairi
ENSNGAG00000024213	Rad54l	99	92.617	ENSEASG00005004511	RAD54L	99	92.617	Equus_asinus_asinus
ENSNGAG00000024213	Rad54l	99	93.029	ENSECAG00000008760	RAD54L	99	93.029	Equus_caballus
ENSNGAG00000024213	Rad54l	100	87.818	ENSEEUG00000008113	RAD54L	100	87.818	Erinaceus_europaeus
ENSNGAG00000024213	Rad54l	99	79.813	ENSELUG00000002295	rad54l	99	79.813	Esox_lucius
ENSNGAG00000024213	Rad54l	100	91.834	ENSFCAG00000003444	RAD54L	100	91.834	Felis_catus
ENSNGAG00000024213	Rad54l	99	83.133	ENSFALG00000009480	RAD54L	99	83.133	Ficedula_albicollis
ENSNGAG00000024213	Rad54l	99	94.772	ENSFDAG00000007806	RAD54L	99	94.772	Fukomys_damarensis
ENSNGAG00000024213	Rad54l	61	76.703	ENSFHEG00000009824	rad54l	78	76.703	Fundulus_heteroclitus
ENSNGAG00000024213	Rad54l	99	78.255	ENSGMOG00000014568	rad54l	99	78.255	Gadus_morhua
ENSNGAG00000024213	Rad54l	99	83.758	ENSGALG00000010356	RAD54L	92	83.758	Gallus_gallus
ENSNGAG00000024213	Rad54l	91	78.434	ENSGAFG00000011110	rad54l	100	78.434	Gambusia_affinis
ENSNGAG00000024213	Rad54l	99	79.116	ENSGACG00000003111	rad54l	97	79.116	Gasterosteus_aculeatus
ENSNGAG00000024213	Rad54l	99	84.048	ENSGAGG00000014089	RAD54L	96	84.048	Gopherus_agassizii
ENSNGAG00000024213	Rad54l	99	92.761	ENSGGOG00000010602	RAD54L	99	92.761	Gorilla_gorilla
ENSNGAG00000024213	Rad54l	99	77.047	ENSHBUG00000007793	rad54l	99	77.047	Haplochromis_burtoni
ENSNGAG00000024213	Rad54l	99	93.834	ENSHGLG00000000753	RAD54L	99	93.834	Heterocephalus_glaber_female
ENSNGAG00000024213	Rad54l	99	93.700	ENSHGLG00100016987	RAD54L	99	93.700	Heterocephalus_glaber_male
ENSNGAG00000024213	Rad54l	99	77.852	ENSIPUG00000015999	rad54l	99	80.687	Ictalurus_punctatus
ENSNGAG00000024213	Rad54l	99	93.298	ENSSTOG00000029125	RAD54L	99	93.298	Ictidomys_tridecemlineatus
ENSNGAG00000024213	Rad54l	99	81.074	ENSJJAG00000000235	-	99	80.940	Jaculus_jaculus
ENSNGAG00000024213	Rad54l	99	78.091	ENSKMAG00000009944	rad54l	99	78.091	Kryptolebias_marmoratus
ENSNGAG00000024213	Rad54l	99	80.376	ENSLBEG00000014617	rad54l	99	82.482	Labrus_bergylta
ENSNGAG00000024213	Rad54l	99	80.403	ENSLOCG00000004144	rad54l	100	82.318	Lepisosteus_oculatus
ENSNGAG00000024213	Rad54l	99	93.826	ENSLAFG00000007583	RAD54L	99	93.826	Loxodonta_africana
ENSNGAG00000024213	Rad54l	99	93.164	ENSMFAG00000031241	RAD54L	99	93.164	Macaca_fascicularis
ENSNGAG00000024213	Rad54l	99	93.164	ENSMMUG00000011568	RAD54L	99	93.164	Macaca_mulatta
ENSNGAG00000024213	Rad54l	99	93.164	ENSMNEG00000038562	RAD54L	99	93.164	Macaca_nemestrina
ENSNGAG00000024213	Rad54l	99	93.298	ENSMLEG00000038145	RAD54L	99	93.298	Mandrillus_leucophaeus
ENSNGAG00000024213	Rad54l	99	79.195	ENSMAMG00000022180	rad54l	100	81.818	Mastacembelus_armatus
ENSNGAG00000024213	Rad54l	99	76.644	ENSMZEG00005018081	rad54l	99	76.644	Maylandia_zebra
ENSNGAG00000024213	Rad54l	99	83.737	ENSMGAG00000010634	RAD54L	99	83.737	Meleagris_gallopavo
ENSNGAG00000024213	Rad54l	100	94.110	ENSMAUG00000020076	Rad54l	100	94.110	Mesocricetus_auratus
ENSNGAG00000024213	Rad54l	99	94.102	ENSMICG00000003266	RAD54L	99	94.102	Microcebus_murinus
ENSNGAG00000024213	Rad54l	100	94.244	ENSMOCG00000001778	Rad54l	100	94.244	Microtus_ochrogaster
ENSNGAG00000024213	Rad54l	99	76.344	ENSMALG00000021148	rad54l	99	76.344	Monopterus_albus
ENSNGAG00000024213	Rad54l	100	89.583	MGP_CAROLIEiJ_G0026325	Rad54l	100	89.583	Mus_caroli
ENSNGAG00000024213	Rad54l	100	94.244	ENSMUSG00000028702	Rad54l	100	94.244	Mus_musculus
ENSNGAG00000024213	Rad54l	100	94.511	MGP_PahariEiJ_G0028657	Rad54l	100	94.511	Mus_pahari
ENSNGAG00000024213	Rad54l	100	94.244	MGP_SPRETEiJ_G0027297	Rad54l	100	94.244	Mus_spretus
ENSNGAG00000024213	Rad54l	99	92.081	ENSMPUG00000012883	RAD54L	99	92.081	Mustela_putorius_furo
ENSNGAG00000024213	Rad54l	99	93.289	ENSMLUG00000003763	RAD54L	99	93.289	Myotis_lucifugus
ENSNGAG00000024213	Rad54l	99	92.225	ENSNLEG00000016548	RAD54L	99	92.225	Nomascus_leucogenys
ENSNGAG00000024213	Rad54l	91	83.876	ENSMEUG00000006793	RAD54L	99	83.876	Notamacropus_eugenii
ENSNGAG00000024213	Rad54l	91	93.750	ENSOPRG00000016016	RAD54L	91	93.750	Ochotona_princeps
ENSNGAG00000024213	Rad54l	100	93.976	ENSODEG00000008519	RAD54L	99	93.976	Octodon_degus
ENSNGAG00000024213	Rad54l	99	76.779	ENSONIG00000007659	rad54l	99	76.779	Oreochromis_niloticus
ENSNGAG00000024213	Rad54l	100	92.771	ENSOCUG00000005229	RAD54L	100	92.771	Oryctolagus_cuniculus
ENSNGAG00000024213	Rad54l	99	77.450	ENSORLG00000002958	rad54l	99	77.718	Oryzias_latipes
ENSNGAG00000024213	Rad54l	99	77.852	ENSORLG00020006554	rad54l	99	81.085	Oryzias_latipes_hni
ENSNGAG00000024213	Rad54l	99	77.584	ENSORLG00015002907	rad54l	99	77.852	Oryzias_latipes_hsok
ENSNGAG00000024213	Rad54l	99	78.360	ENSOMEG00000007770	rad54l	99	78.360	Oryzias_melastigma
ENSNGAG00000024213	Rad54l	100	92.657	ENSOARG00000002264	RAD54L	99	92.657	Ovis_aries
ENSNGAG00000024213	Rad54l	99	92.895	ENSPPAG00000031222	RAD54L	99	92.895	Pan_paniscus
ENSNGAG00000024213	Rad54l	100	91.834	ENSPPRG00000010317	RAD54L	100	91.834	Panthera_pardus
ENSNGAG00000024213	Rad54l	100	91.834	ENSPTIG00000012200	RAD54L	100	91.834	Panthera_tigris_altaica
ENSNGAG00000024213	Rad54l	99	92.761	ENSPTRG00000000689	RAD54L	99	92.761	Pan_troglodytes
ENSNGAG00000024213	Rad54l	99	93.298	ENSPANG00000016295	RAD54L	99	93.298	Papio_anubis
ENSNGAG00000024213	Rad54l	99	76.043	ENSPKIG00000016172	rad54l	99	76.043	Paramormyrops_kingsleyae
ENSNGAG00000024213	Rad54l	99	84.688	ENSPSIG00000003258	RAD54L	99	84.688	Pelodiscus_sinensis
ENSNGAG00000024213	Rad54l	99	74.362	ENSPMGG00000016335	rad54l	99	74.362	Periophthalmus_magnuspinnatus
ENSNGAG00000024213	Rad54l	100	94.645	ENSPEMG00000011422	Rad54l	100	94.645	Peromyscus_maniculatus_bairdii
ENSNGAG00000024213	Rad54l	99	69.960	ENSPMAG00000007719	rad54l	99	69.960	Petromyzon_marinus
ENSNGAG00000024213	Rad54l	99	85.925	ENSPCIG00000029032	RAD54L	99	85.925	Phascolarctos_cinereus
ENSNGAG00000024213	Rad54l	85	80.818	ENSPFOG00000013732	rad54l	100	80.818	Poecilia_formosa
ENSNGAG00000024213	Rad54l	82	79.545	ENSPLAG00000023416	rad54l	99	79.545	Poecilia_latipinna
ENSNGAG00000024213	Rad54l	91	78.582	ENSPMEG00000008299	rad54l	100	78.582	Poecilia_mexicana
ENSNGAG00000024213	Rad54l	99	76.779	ENSPREG00000019955	rad54l	99	76.779	Poecilia_reticulata
ENSNGAG00000024213	Rad54l	99	77.644	ENSPPYG00000001398	RAD54L	99	77.644	Pongo_abelii
ENSNGAG00000024213	Rad54l	80	92.718	ENSPCAG00000005323	RAD54L	80	92.718	Procavia_capensis
ENSNGAG00000024213	Rad54l	100	93.976	ENSPCOG00000015423	RAD54L	100	93.976	Propithecus_coquereli
ENSNGAG00000024213	Rad54l	99	73.307	ENSPNYG00000002942	rad54l	99	73.307	Pundamilia_nyererei
ENSNGAG00000024213	Rad54l	99	79.088	ENSPNAG00000012483	rad54l	99	79.088	Pygocentrus_nattereri
ENSNGAG00000024213	Rad54l	100	94.511	ENSRNOG00000013148	Rad54l	99	94.511	Rattus_norvegicus
ENSNGAG00000024213	Rad54l	99	93.566	ENSRBIG00000043495	RAD54L	99	93.566	Rhinopithecus_bieti
ENSNGAG00000024213	Rad54l	99	93.432	ENSRROG00000020844	RAD54L	99	93.432	Rhinopithecus_roxellana
ENSNGAG00000024213	Rad54l	80	48.844	YGL163C	RAD54	71	49.307	Saccharomyces_cerevisiae
ENSNGAG00000024213	Rad54l	99	93.432	ENSSBOG00000024672	RAD54L	99	93.432	Saimiri_boliviensis_boliviensis
ENSNGAG00000024213	Rad54l	99	86.000	ENSSHAG00000000110	RAD54L	99	86.000	Sarcophilus_harrisii
ENSNGAG00000024213	Rad54l	99	79.625	ENSSDUG00000019147	rad54l	99	79.625	Seriola_dumerili
ENSNGAG00000024213	Rad54l	99	79.893	ENSSLDG00000012330	rad54l	99	79.893	Seriola_lalandi_dorsalis
ENSNGAG00000024213	Rad54l	83	87.480	ENSSARG00000006689	RAD54L	100	87.480	Sorex_araneus
ENSNGAG00000024213	Rad54l	99	79.167	ENSSPAG00000011016	rad54l	99	79.167	Stegastes_partitus
ENSNGAG00000024213	Rad54l	99	92.493	ENSSSCG00000003905	RAD54L	99	92.493	Sus_scrofa
ENSNGAG00000024213	Rad54l	99	82.463	ENSTGUG00000008233	RAD54L	99	82.597	Taeniopygia_guttata
ENSNGAG00000024213	Rad54l	99	74.933	ENSTRUG00000008410	rad54l	99	74.933	Takifugu_rubripes
ENSNGAG00000024213	Rad54l	99	75.672	ENSTNIG00000004716	rad54l	99	75.672	Tetraodon_nigroviridis
ENSNGAG00000024213	Rad54l	100	85.542	ENSTTRG00000006315	RAD54L	100	85.542	Tursiops_truncatus
ENSNGAG00000024213	Rad54l	99	91.768	ENSUAMG00000011824	RAD54L	99	91.768	Ursus_americanus
ENSNGAG00000024213	Rad54l	99	90.823	ENSUMAG00000023603	RAD54L	99	90.823	Ursus_maritimus
ENSNGAG00000024213	Rad54l	99	92.225	ENSVVUG00000007201	RAD54L	99	92.225	Vulpes_vulpes
ENSNGAG00000024213	Rad54l	96	76.912	ENSXETG00000004369	rad54l	99	76.912	Xenopus_tropicalis
ENSNGAG00000024213	Rad54l	55	73.723	ENSXCOG00000016028	rad54l	81	77.778	Xiphophorus_couchianus