EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000000025 (Gene tree)
Gene ID: 100600464
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 29772 bases
Position: chr14:47608246-47638017
Accession: 100600464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000045823	ResIII	PF04851.15	1e-25	1	2
ENSNLEP00000045823	ResIII	PF04851.15	1e-25	2	2
ENSNLEP00000036752	ResIII	PF04851.15	1.1e-25	1	2
ENSNLEP00000036752	ResIII	PF04851.15	1.1e-25	2	2
ENSNLEP00000026784	ResIII	PF04851.15	1.5e-10	1	1
ENSNLEP00000045823	DEAD	PF00270.29	6.1e-52	1	2
ENSNLEP00000045823	DEAD	PF00270.29	6.1e-52	2	2
ENSNLEP00000036752	DEAD	PF00270.29	6.5e-52	1	2
ENSNLEP00000036752	DEAD	PF00270.29	6.5e-52	2	2
ENSNLEP00000026784	DEAD	PF00270.29	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000058905	SNRNP200-204	2001	-	ENSNLEP00000026784	666 (aa)	-	A0A2I3G3M2
ENSNLET00000000044	SNRNP200-201	7152	-	ENSNLEP00000000041	329 (aa)	-	G1QGL4
ENSNLET00000038141	SNRNP200-202	6303	XM_012502578	ENSNLEP00000036752	2100 (aa)	XP_012358032	A0A2I3GZW1
ENSNLET00000054218	SNRNP200-203	6174	-	ENSNLEP00000045823	2057 (aa)	-	A0A2I3HQD8

Gene Model

Click here to download ENSNLEG00000000025's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000000025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000000025	SNRNP200	87	39.887	ENSNLEG00000013890	ASCC3	80	43.034
ENSNLEG00000000025	SNRNP200	72	30.529	ENSNLEG00000010285	HFM1	61	30.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000000025	SNRNP200	100	95.593	ENSG00000144028	SNRNP200	99	97.956	Homo_sapiens
ENSNLEG00000000025	SNRNP200	99	86.707	ENSAPOG00000010223	snrnp200	99	86.518	Acanthochromis_polyacanthus
ENSNLEG00000000025	SNRNP200	100	95.593	ENSAMEG00000008996	SNRNP200	100	95.212	Ailuropoda_melanoleuca
ENSNLEG00000000025	SNRNP200	97	85.449	ENSACIG00000001764	snrnp200	98	85.449	Amphilophus_citrinellus
ENSNLEG00000000025	SNRNP200	99	86.614	ENSAOCG00000024593	snrnp200	99	86.425	Amphiprion_ocellaris
ENSNLEG00000000025	SNRNP200	97	85.343	ENSAPEG00000012554	snrnp200	100	85.289	Amphiprion_percula
ENSNLEG00000000025	SNRNP200	99	86.474	ENSATEG00000022522	snrnp200	99	86.285	Anabas_testudineus
ENSNLEG00000000025	SNRNP200	98	94.090	ENSAPLG00000004313	SNRNP200	100	93.071	Anas_platyrhynchos
ENSNLEG00000000025	SNRNP200	98	94.529	ENSACAG00000000434	SNRNP200	100	91.633	Anolis_carolinensis
ENSNLEG00000000025	SNRNP200	100	91.156	ENSANAG00000036625	SNRNP200	100	91.323	Aotus_nancymaae
ENSNLEG00000000025	SNRNP200	99	86.241	ENSACLG00000011188	snrnp200	99	86.053	Astatotilapia_calliptera
ENSNLEG00000000025	SNRNP200	99	86.427	ENSAMXG00000005684	snrnp200	99	86.186	Astyanax_mexicanus
ENSNLEG00000000025	SNRNP200	100	95.441	ENSBTAG00000000848	SNRNP200	100	94.654	Bos_taurus
ENSNLEG00000000025	SNRNP200	100	96.377	ENSCJAG00000007514	SNRNP200	100	98.632	Callithrix_jacchus
ENSNLEG00000000025	SNRNP200	100	96.377	ENSCAFG00020019979	SNRNP200	100	98.632	Canis_lupus_dingo
ENSNLEG00000000025	SNRNP200	100	95.441	ENSCHIG00000020611	SNRNP200	100	94.893	Capra_hircus
ENSNLEG00000000025	SNRNP200	100	96.377	ENSTSYG00000010467	SNRNP200	100	98.632	Carlito_syrichta
ENSNLEG00000000025	SNRNP200	99	94.771	ENSCAPG00000017234	SNRNP200	99	94.771	Cavia_aperea
ENSNLEG00000000025	SNRNP200	100	95.137	ENSCPOG00000006776	SNRNP200	100	95.072	Cavia_porcellus
ENSNLEG00000000025	SNRNP200	100	96.377	ENSCCAG00000033962	SNRNP200	100	98.632	Cebus_capucinus
ENSNLEG00000000025	SNRNP200	100	96.377	ENSCATG00000015790	SNRNP200	100	98.632	Cercocebus_atys
ENSNLEG00000000025	SNRNP200	100	94.985	ENSCLAG00000004116	SNRNP200	100	94.933	Chinchilla_lanigera
ENSNLEG00000000025	SNRNP200	100	95.593	ENSCSAG00000017369	SNRNP200	100	95.305	Chlorocebus_sabaeus
ENSNLEG00000000025	SNRNP200	73	99.213	ENSCHOG00000012981	-	57	99.213	Choloepus_hoffmanni
ENSNLEG00000000025	SNRNP200	100	93.617	ENSCPBG00000022571	SNRNP200	99	95.745	Chrysemys_picta_bellii
ENSNLEG00000000025	SNRNP200	99	73.268	ENSCING00000005082	-	99	73.175	Ciona_intestinalis
ENSNLEG00000000025	SNRNP200	100	92.153	ENSCANG00000033932	SNRNP200	100	95.010	Colobus_angolensis_palliatus
ENSNLEG00000000025	SNRNP200	100	95.137	ENSCGRG00001022610	Snrnp200	100	95.119	Cricetulus_griseus_chok1gshd
ENSNLEG00000000025	SNRNP200	100	95.137	ENSCGRG00000016472	Snrnp200	100	94.568	Cricetulus_griseus_crigri
ENSNLEG00000000025	SNRNP200	100	85.774	ENSCSEG00000016399	snrnp200	99	85.635	Cynoglossus_semilaevis
ENSNLEG00000000025	SNRNP200	100	81.404	ENSCVAG00000017631	snrnp200	99	81.358	Cyprinodon_variegatus
ENSNLEG00000000025	SNRNP200	100	86.099	ENSDARG00000077536	snrnp200	99	86.093	Danio_rerio
ENSNLEG00000000025	SNRNP200	100	95.137	ENSDNOG00000011227	SNRNP200	100	93.628	Dasypus_novemcinctus
ENSNLEG00000000025	SNRNP200	100	92.479	ENSDORG00000005861	Snrnp200	100	92.340	Dipodomys_ordii
ENSNLEG00000000025	SNRNP200	100	70.972	FBgn0263599	l(3)72Ab	99	70.880	Drosophila_melanogaster
ENSNLEG00000000025	SNRNP200	100	95.289	ENSETEG00000000162	SNRNP200	74	95.976	Echinops_telfairi
ENSNLEG00000000025	SNRNP200	84	74.868	ENSEBUG00000016524	snrnp200	95	75.199	Eptatretus_burgeri
ENSNLEG00000000025	SNRNP200	100	94.833	ENSEASG00005001884	SNRNP200	100	94.344	Equus_asinus_asinus
ENSNLEG00000000025	SNRNP200	100	95.441	ENSECAG00000019675	SNRNP200	100	95.212	Equus_caballus
ENSNLEG00000000025	SNRNP200	92	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSNLEG00000000025	SNRNP200	99	86.614	ENSELUG00000018948	snrnp200	99	86.332	Esox_lucius
ENSNLEG00000000025	SNRNP200	100	95.593	ENSFCAG00000010699	SNRNP200	100	95.258	Felis_catus
ENSNLEG00000000025	SNRNP200	94	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSNLEG00000000025	SNRNP200	100	95.289	ENSFDAG00000004683	SNRNP200	100	94.979	Fukomys_damarensis
ENSNLEG00000000025	SNRNP200	100	83.543	ENSFHEG00000003786	snrnp200	99	83.496	Fundulus_heteroclitus
ENSNLEG00000000025	SNRNP200	100	85.429	ENSGMOG00000004881	snrnp200	99	85.336	Gadus_morhua
ENSNLEG00000000025	SNRNP200	100	83.775	ENSGAFG00000010807	snrnp200	99	83.682	Gambusia_affinis
ENSNLEG00000000025	SNRNP200	100	85.807	ENSGACG00000011474	snrnp200	99	85.668	Gasterosteus_aculeatus
ENSNLEG00000000025	SNRNP200	95	97.787	ENSGAGG00000016069	SNRNP200	96	96.320	Gopherus_agassizii
ENSNLEG00000000025	SNRNP200	100	96.824	ENSGGOG00000005174	SNRNP200	100	98.632	Gorilla_gorilla
ENSNLEG00000000025	SNRNP200	97	82.954	ENSHBUG00000011322	snrnp200	99	82.945	Haplochromis_burtoni
ENSNLEG00000000025	SNRNP200	100	95.289	ENSHGLG00000006654	SNRNP200	100	95.072	Heterocephalus_glaber_female
ENSNLEG00000000025	SNRNP200	100	95.289	ENSHGLG00100018594	SNRNP200	100	95.072	Heterocephalus_glaber_male
ENSNLEG00000000025	SNRNP200	51	81.214	ENSIPUG00000007770	-	90	81.214	Ictalurus_punctatus
ENSNLEG00000000025	SNRNP200	100	95.593	ENSSTOG00000016351	SNRNP200	100	95.212	Ictidomys_tridecemlineatus
ENSNLEG00000000025	SNRNP200	100	95.137	ENSJJAG00000023659	Snrnp200	100	95.026	Jaculus_jaculus
ENSNLEG00000000025	SNRNP200	100	83.318	ENSKMAG00000003665	snrnp200	99	83.272	Kryptolebias_marmoratus
ENSNLEG00000000025	SNRNP200	100	86.007	ENSLBEG00000021585	snrnp200	99	85.960	Labrus_bergylta
ENSNLEG00000000025	SNRNP200	82	89.002	ENSLACG00000000226	SNRNP200	99	89.420	Latimeria_chalumnae
ENSNLEG00000000025	SNRNP200	100	87.820	ENSLOCG00000015198	snrnp200	99	87.680	Lepisosteus_oculatus
ENSNLEG00000000025	SNRNP200	100	94.840	ENSLAFG00000015626	SNRNP200	100	94.840	Loxodonta_africana
ENSNLEG00000000025	SNRNP200	100	96.377	ENSMFAG00000040174	SNRNP200	100	98.632	Macaca_fascicularis
ENSNLEG00000000025	SNRNP200	100	96.377	ENSMMUG00000023261	SNRNP200	100	98.632	Macaca_mulatta
ENSNLEG00000000025	SNRNP200	100	96.232	ENSMNEG00000032398	SNRNP200	100	98.480	Macaca_nemestrina
ENSNLEG00000000025	SNRNP200	100	96.377	ENSMLEG00000019083	SNRNP200	100	98.632	Mandrillus_leucophaeus
ENSNLEG00000000025	SNRNP200	100	86.059	ENSMAMG00000007851	snrnp200	99	85.920	Mastacembelus_armatus
ENSNLEG00000000025	SNRNP200	97	82.954	ENSMZEG00005010787	snrnp200	99	82.945	Maylandia_zebra
ENSNLEG00000000025	SNRNP200	97	92.507	ENSMGAG00000001831	SNRNP200	99	92.537	Meleagris_gallopavo
ENSNLEG00000000025	SNRNP200	100	95.289	ENSMAUG00000011825	Snrnp200	100	95.165	Mesocricetus_auratus
ENSNLEG00000000025	SNRNP200	100	96.087	ENSMICG00000004710	SNRNP200	100	98.328	Microcebus_murinus
ENSNLEG00000000025	SNRNP200	100	93.691	ENSMOCG00000011814	Snrnp200	100	92.967	Microtus_ochrogaster
ENSNLEG00000000025	SNRNP200	99	85.213	ENSMMOG00000014167	snrnp200	99	85.028	Mola_mola
ENSNLEG00000000025	SNRNP200	100	94.282	ENSMODG00000008475	SNRNP200	100	94.142	Monodelphis_domestica
ENSNLEG00000000025	SNRNP200	99	86.567	ENSMALG00000001973	snrnp200	99	86.378	Monopterus_albus
ENSNLEG00000000025	SNRNP200	100	94.979	MGP_CAROLIEiJ_G0024250	Snrnp200	100	94.979	Mus_caroli
ENSNLEG00000000025	SNRNP200	100	95.026	ENSMUSG00000003660	Snrnp200	100	95.026	Mus_musculus
ENSNLEG00000000025	SNRNP200	100	95.072	MGP_PahariEiJ_G0025695	Snrnp200	100	95.072	Mus_pahari
ENSNLEG00000000025	SNRNP200	100	95.110	MGP_SPRETEiJ_G0025170	Snrnp200	99	99.448	Mus_spretus
ENSNLEG00000000025	SNRNP200	100	95.593	ENSMPUG00000008949	SNRNP200	100	95.165	Mustela_putorius_furo
ENSNLEG00000000025	SNRNP200	100	94.705	ENSMLUG00000010493	SNRNP200	100	94.615	Myotis_lucifugus
ENSNLEG00000000025	SNRNP200	100	91.027	ENSMLUG00000027511	-	100	90.888	Myotis_lucifugus
ENSNLEG00000000025	SNRNP200	100	95.441	ENSNGAG00000021993	Snrnp200	100	95.258	Nannospalax_galili
ENSNLEG00000000025	SNRNP200	90	85.057	ENSNBRG00000017960	snrnp200	98	85.000	Neolamprologus_brichardi
ENSNLEG00000000025	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSNLEG00000000025	SNRNP200	100	91.353	ENSOPRG00000015464	SNRNP200	100	91.353	Ochotona_princeps
ENSNLEG00000000025	SNRNP200	100	96.012	ENSODEG00000008366	SNRNP200	100	94.933	Octodon_degus
ENSNLEG00000000025	SNRNP200	99	86.241	ENSONIG00000010714	snrnp200	99	86.053	Oreochromis_niloticus
ENSNLEG00000000025	SNRNP200	100	95.289	ENSOCUG00000009864	SNRNP200	100	95.119	Oryctolagus_cuniculus
ENSNLEG00000000025	SNRNP200	100	86.192	ENSORLG00000012286	snrnp200	100	86.192	Oryzias_latipes
ENSNLEG00000000025	SNRNP200	100	86.239	ENSORLG00020004648	snrnp200	100	86.239	Oryzias_latipes_hni
ENSNLEG00000000025	SNRNP200	100	86.192	ENSORLG00015019114	snrnp200	100	86.192	Oryzias_latipes_hsok
ENSNLEG00000000025	SNRNP200	99	86.474	ENSOMEG00000011834	snrnp200	99	86.332	Oryzias_melastigma
ENSNLEG00000000025	SNRNP200	100	95.593	ENSOGAG00000006879	SNRNP200	100	95.258	Otolemur_garnettii
ENSNLEG00000000025	SNRNP200	100	95.441	ENSOARG00000013949	SNRNP200	100	93.634	Ovis_aries
ENSNLEG00000000025	SNRNP200	100	96.377	ENSPPAG00000041559	SNRNP200	100	98.632	Pan_paniscus
ENSNLEG00000000025	SNRNP200	100	95.593	ENSPPRG00000004435	SNRNP200	100	95.258	Panthera_pardus
ENSNLEG00000000025	SNRNP200	100	95.593	ENSPTIG00000006380	SNRNP200	100	94.793	Panthera_tigris_altaica
ENSNLEG00000000025	SNRNP200	100	96.377	ENSPTRG00000012230	SNRNP200	100	98.632	Pan_troglodytes
ENSNLEG00000000025	SNRNP200	100	96.377	ENSPANG00000006017	SNRNP200	100	98.632	Papio_anubis
ENSNLEG00000000025	SNRNP200	100	86.797	ENSPKIG00000014762	snrnp200	99	86.657	Paramormyrops_kingsleyae
ENSNLEG00000000025	SNRNP200	100	93.627	ENSPSIG00000008580	SNRNP200	100	91.961	Pelodiscus_sinensis
ENSNLEG00000000025	SNRNP200	100	95.507	ENSPEMG00000020700	-	100	98.928	Peromyscus_maniculatus_bairdii
ENSNLEG00000000025	SNRNP200	100	94.282	ENSPCIG00000023050	SNRNP200	100	94.142	Phascolarctos_cinereus
ENSNLEG00000000025	SNRNP200	100	86.106	ENSPFOG00000015110	snrnp200	99	86.059	Poecilia_formosa
ENSNLEG00000000025	SNRNP200	97	85.286	ENSPLAG00000006711	snrnp200	99	85.232	Poecilia_latipinna
ENSNLEG00000000025	SNRNP200	97	85.232	ENSPMEG00000021166	snrnp200	99	85.177	Poecilia_mexicana
ENSNLEG00000000025	SNRNP200	100	86.192	ENSPREG00000008875	snrnp200	99	86.146	Poecilia_reticulata
ENSNLEG00000000025	SNRNP200	100	95.593	ENSPPYG00000012068	SNRNP200	100	95.351	Pongo_abelii
ENSNLEG00000000025	SNRNP200	94	97.878	ENSPCAG00000008536	SNRNP200	86	97.878	Procavia_capensis
ENSNLEG00000000025	SNRNP200	100	96.232	ENSPCOG00000024608	SNRNP200	100	98.480	Propithecus_coquereli
ENSNLEG00000000025	SNRNP200	96	98.639	ENSPVAG00000005860	SNRNP200	91	98.639	Pteropus_vampyrus
ENSNLEG00000000025	SNRNP200	99	81.860	ENSPNYG00000017476	snrnp200	99	81.688	Pundamilia_nyererei
ENSNLEG00000000025	SNRNP200	100	81.869	ENSPNAG00000010998	snrnp200	99	81.767	Pygocentrus_nattereri
ENSNLEG00000000025	SNRNP200	100	95.289	ENSRNOG00000012157	Snrnp200	100	95.165	Rattus_norvegicus
ENSNLEG00000000025	SNRNP200	100	96.377	ENSRBIG00000044690	-	100	98.632	Rhinopithecus_bieti
ENSNLEG00000000025	SNRNP200	100	96.377	ENSRROG00000037952	-	100	98.632	Rhinopithecus_roxellana
ENSNLEG00000000025	SNRNP200	100	96.377	ENSSBOG00000035471	SNRNP200	100	98.632	Saimiri_boliviensis_boliviensis
ENSNLEG00000000025	SNRNP200	97	94.044	ENSSHAG00000000758	SNRNP200	99	93.934	Sarcophilus_harrisii
ENSNLEG00000000025	SNRNP200	99	87.407	ENSSFOG00015018826	snrnp200	99	87.122	Scleropages_formosus
ENSNLEG00000000025	SNRNP200	99	86.241	ENSSMAG00000005463	snrnp200	99	86.053	Scophthalmus_maximus
ENSNLEG00000000025	SNRNP200	99	86.567	ENSSDUG00000021410	snrnp200	99	86.378	Seriola_dumerili
ENSNLEG00000000025	SNRNP200	99	86.521	ENSSLDG00000010884	snrnp200	99	86.332	Seriola_lalandi_dorsalis
ENSNLEG00000000025	SNRNP200	95	98.123	ENSSARG00000010728	SNRNP200	96	97.312	Sorex_araneus
ENSNLEG00000000025	SNRNP200	100	93.026	ENSSPUG00000003726	-	100	92.887	Sphenodon_punctatus
ENSNLEG00000000025	SNRNP200	99	86.614	ENSSPAG00000001842	snrnp200	99	86.425	Stegastes_partitus
ENSNLEG00000000025	SNRNP200	100	95.441	ENSSSCG00000008127	SNRNP200	100	95.072	Sus_scrofa
ENSNLEG00000000025	SNRNP200	99	82.987	ENSTGUG00000014475	-	99	82.987	Taeniopygia_guttata
ENSNLEG00000000025	SNRNP200	99	86.194	ENSTRUG00000001307	snrnp200	99	86.053	Takifugu_rubripes
ENSNLEG00000000025	SNRNP200	100	80.557	ENSTNIG00000004320	snrnp200	100	80.557	Tetraodon_nigroviridis
ENSNLEG00000000025	SNRNP200	83	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSNLEG00000000025	SNRNP200	100	94.886	ENSTTRG00000004983	SNRNP200	100	94.886	Tursiops_truncatus
ENSNLEG00000000025	SNRNP200	95	90.110	ENSUAMG00000008395	-	95	88.802	Ursus_americanus
ENSNLEG00000000025	SNRNP200	100	95.593	ENSUMAG00000012385	SNRNP200	100	95.258	Ursus_maritimus
ENSNLEG00000000025	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	66	100.000	Vicugna_pacos
ENSNLEG00000000025	SNRNP200	100	96.377	ENSVVUG00000026247	SNRNP200	100	98.632	Vulpes_vulpes
ENSNLEG00000000025	SNRNP200	100	89.926	ENSXETG00000001243	snrnp200	100	89.926	Xenopus_tropicalis
ENSNLEG00000000025	SNRNP200	97	85.661	ENSXMAG00000002058	snrnp200	98	85.608	Xiphophorus_maculatus