EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000000047 (Gene tree)
Gene ID: 100605949
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 74773 bases
Position: chr14:90440261-90515033
Accession: 100605949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000000060	Ago_hook	PF10427.9	9.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000000065	TNRC6C-201	5727	XM_004090482	ENSNLEP00000000060	1908 (aa)	XP_004090530	G1QGN3

Gene Model

Click here to download ENSNLEG00000000047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000000047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000000047	TNRC6C	98	41.004	ENSNLEG00000011851	TNRC6A	95	46.963
ENSNLEG00000000047	TNRC6C	74	41.525	ENSNLEG00000015311	TNRC6B	87	52.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000000047	TNRC6C	99	95.668	ENSG00000078687	TNRC6C	100	99.138	Homo_sapiens
ENSNLEG00000000047	TNRC6C	71	50.314	ENSAPOG00000019749	tnrc6c1	98	47.831	Acanthochromis_polyacanthus
ENSNLEG00000000047	TNRC6C	93	86.714	ENSAMEG00000013756	TNRC6C	99	86.823	Ailuropoda_melanoleuca
ENSNLEG00000000047	TNRC6C	93	46.361	ENSACIG00000008075	tnrc6c1	98	52.766	Amphilophus_citrinellus
ENSNLEG00000000047	TNRC6C	68	61.329	ENSAOCG00000023968	tnrc6c1	99	47.663	Amphiprion_ocellaris
ENSNLEG00000000047	TNRC6C	71	51.286	ENSAPEG00000009020	tnrc6c1	99	47.560	Amphiprion_percula
ENSNLEG00000000047	TNRC6C	99	84.377	ENSAPLG00000005456	TNRC6C	99	84.341	Anas_platyrhynchos
ENSNLEG00000000047	TNRC6C	99	84.724	ENSACAG00000016198	TNRC6C	98	84.672	Anolis_carolinensis
ENSNLEG00000000047	TNRC6C	99	95.766	ENSANAG00000021554	TNRC6C	99	95.766	Aotus_nancymaae
ENSNLEG00000000047	TNRC6C	93	47.071	ENSACLG00000000424	tnrc6c1	99	47.422	Astatotilapia_calliptera
ENSNLEG00000000047	TNRC6C	99	84.647	ENSBTAG00000018658	TNRC6C	100	85.377	Bos_taurus
ENSNLEG00000000047	TNRC6C	99	95.369	ENSCJAG00000019431	TNRC6C	99	95.369	Callithrix_jacchus
ENSNLEG00000000047	TNRC6C	99	88.930	ENSCAFG00000005224	TNRC6C	98	89.086	Canis_familiaris
ENSNLEG00000000047	TNRC6C	99	89.184	ENSCAFG00020006661	TNRC6C	99	89.340	Canis_lupus_dingo
ENSNLEG00000000047	TNRC6C	99	84.295	ENSCHIG00000026004	TNRC6C	99	84.659	Capra_hircus
ENSNLEG00000000047	TNRC6C	89	92.729	ENSTSYG00000005403	TNRC6C	100	92.902	Carlito_syrichta
ENSNLEG00000000047	TNRC6C	98	81.538	ENSCAPG00000007307	TNRC6C	99	81.823	Cavia_aperea
ENSNLEG00000000047	TNRC6C	99	85.886	ENSCPOG00000000467	TNRC6C	99	85.915	Cavia_porcellus
ENSNLEG00000000047	TNRC6C	99	94.840	ENSCCAG00000030524	TNRC6C	100	95.153	Cebus_capucinus
ENSNLEG00000000047	TNRC6C	99	95.356	ENSCATG00000033135	TNRC6C	100	95.730	Cercocebus_atys
ENSNLEG00000000047	TNRC6C	99	88.029	ENSCLAG00000011139	TNRC6C	98	88.134	Chinchilla_lanigera
ENSNLEG00000000047	TNRC6C	99	94.995	ENSCSAG00000005167	TNRC6C	99	94.995	Chlorocebus_sabaeus
ENSNLEG00000000047	TNRC6C	71	82.353	ENSCHOG00000000088	TNRC6C	75	82.353	Choloepus_hoffmanni
ENSNLEG00000000047	TNRC6C	93	83.685	ENSCPBG00000027960	TNRC6C	100	83.362	Chrysemys_picta_bellii
ENSNLEG00000000047	TNRC6C	99	95.204	ENSCANG00000041771	TNRC6C	100	95.326	Colobus_angolensis_palliatus
ENSNLEG00000000047	TNRC6C	99	85.154	ENSCGRG00001022686	Tnrc6c	100	84.593	Cricetulus_griseus_chok1gshd
ENSNLEG00000000047	TNRC6C	99	85.154	ENSCGRG00000018041	Tnrc6c	100	84.593	Cricetulus_griseus_crigri
ENSNLEG00000000047	TNRC6C	97	50.026	ENSDARG00000076847	tnrc6c1	99	53.508	Danio_rerio
ENSNLEG00000000047	TNRC6C	99	86.802	ENSDNOG00000003247	TNRC6C	98	86.959	Dasypus_novemcinctus
ENSNLEG00000000047	TNRC6C	99	81.880	ENSDORG00000004558	Tnrc6c	100	82.075	Dipodomys_ordii
ENSNLEG00000000047	TNRC6C	82	75.147	ENSETEG00000005527	TNRC6C	89	76.923	Echinops_telfairi
ENSNLEG00000000047	TNRC6C	89	86.448	ENSEASG00005004799	TNRC6C	100	86.621	Equus_asinus_asinus
ENSNLEG00000000047	TNRC6C	99	88.312	ENSECAG00000012486	TNRC6C	99	88.208	Equus_caballus
ENSNLEG00000000047	TNRC6C	88	92.034	ENSEEUG00000010008	TNRC6C	96	92.034	Erinaceus_europaeus
ENSNLEG00000000047	TNRC6C	99	86.489	ENSFCAG00000028358	TNRC6C	98	86.594	Felis_catus
ENSNLEG00000000047	TNRC6C	89	84.133	ENSFALG00000000848	TNRC6C	100	83.625	Ficedula_albicollis
ENSNLEG00000000047	TNRC6C	92	86.813	ENSFDAG00000010368	TNRC6C	99	87.374	Fukomys_damarensis
ENSNLEG00000000047	TNRC6C	96	44.184	ENSFHEG00000002936	tnrc6c1	99	44.375	Fundulus_heteroclitus
ENSNLEG00000000047	TNRC6C	93	86.298	ENSGALG00000001725	TNRC6C	99	86.298	Gallus_gallus
ENSNLEG00000000047	TNRC6C	93	45.290	ENSGAFG00000019019	tnrc6c1	100	46.504	Gambusia_affinis
ENSNLEG00000000047	TNRC6C	92	50.521	ENSGACG00000012320	tnrc6c1	97	46.398	Gasterosteus_aculeatus
ENSNLEG00000000047	TNRC6C	93	85.080	ENSGAGG00000022043	TNRC6C	99	85.116	Gopherus_agassizii
ENSNLEG00000000047	TNRC6C	99	95.873	ENSGGOG00000011304	TNRC6C	100	95.213	Gorilla_gorilla
ENSNLEG00000000047	TNRC6C	97	47.287	ENSHBUG00000010846	tnrc6c1	99	47.540	Haplochromis_burtoni
ENSNLEG00000000047	TNRC6C	99	87.513	ENSHGLG00000004809	TNRC6C	98	87.618	Heterocephalus_glaber_female
ENSNLEG00000000047	TNRC6C	99	87.409	ENSHGLG00100012597	TNRC6C	98	87.774	Heterocephalus_glaber_male
ENSNLEG00000000047	TNRC6C	98	49.900	ENSIPUG00000000818	tnrc6c1	98	50.781	Ictalurus_punctatus
ENSNLEG00000000047	TNRC6C	99	86.736	ENSSTOG00000009101	TNRC6C	99	86.155	Ictidomys_tridecemlineatus
ENSNLEG00000000047	TNRC6C	99	84.334	ENSJJAG00000017055	Tnrc6c	98	84.439	Jaculus_jaculus
ENSNLEG00000000047	TNRC6C	97	47.382	ENSKMAG00000021023	tnrc6c1	100	48.079	Kryptolebias_marmoratus
ENSNLEG00000000047	TNRC6C	92	72.207	ENSLACG00000015283	TNRC6C	99	72.510	Latimeria_chalumnae
ENSNLEG00000000047	TNRC6C	99	53.409	ENSLOCG00000013377	tnrc6c1	98	54.118	Lepisosteus_oculatus
ENSNLEG00000000047	TNRC6C	99	87.036	ENSLAFG00000011122	TNRC6C	99	86.827	Loxodonta_africana
ENSNLEG00000000047	TNRC6C	99	96.445	ENSMFAG00000043943	TNRC6C	100	95.845	Macaca_fascicularis
ENSNLEG00000000047	TNRC6C	99	95.098	ENSMMUG00000011924	TNRC6C	100	93.376	Macaca_mulatta
ENSNLEG00000000047	TNRC6C	99	96.393	ENSMNEG00000030405	TNRC6C	99	96.393	Macaca_nemestrina
ENSNLEG00000000047	TNRC6C	99	96.393	ENSMLEG00000033436	TNRC6C	100	95.788	Mandrillus_leucophaeus
ENSNLEG00000000047	TNRC6C	84	51.739	ENSMAMG00000023613	tnrc6c1	100	49.386	Mastacembelus_armatus
ENSNLEG00000000047	TNRC6C	97	48.896	ENSMZEG00005010920	tnrc6c1	99	47.422	Maylandia_zebra
ENSNLEG00000000047	TNRC6C	99	78.180	ENSMGAG00000003906	TNRC6C	99	78.468	Meleagris_gallopavo
ENSNLEG00000000047	TNRC6C	89	85.228	ENSMAUG00000021618	Tnrc6c	100	85.286	Mesocricetus_auratus
ENSNLEG00000000047	TNRC6C	99	92.159	ENSMICG00000003952	TNRC6C	100	91.402	Microcebus_murinus
ENSNLEG00000000047	TNRC6C	99	87.245	ENSMOCG00000015879	Tnrc6c	99	86.588	Microtus_ochrogaster
ENSNLEG00000000047	TNRC6C	83	52.034	ENSMMOG00000005203	tnrc6c1	100	47.896	Mola_mola
ENSNLEG00000000047	TNRC6C	99	83.351	ENSMODG00000001785	TNRC6C	98	83.090	Monodelphis_domestica
ENSNLEG00000000047	TNRC6C	99	86.461	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	86.139	Mus_caroli
ENSNLEG00000000047	TNRC6C	99	86.200	ENSMUSG00000025571	Tnrc6c	99	85.915	Mus_musculus
ENSNLEG00000000047	TNRC6C	99	86.304	MGP_PahariEiJ_G0018593	Tnrc6c	99	85.971	Mus_pahari
ENSNLEG00000000047	TNRC6C	99	86.252	MGP_SPRETEiJ_G0018309	Tnrc6c	99	85.971	Mus_spretus
ENSNLEG00000000047	TNRC6C	99	86.266	ENSMPUG00000013348	TNRC6C	97	86.475	Mustela_putorius_furo
ENSNLEG00000000047	TNRC6C	99	78.265	ENSMLUG00000014431	TNRC6C	97	79.659	Myotis_lucifugus
ENSNLEG00000000047	TNRC6C	99	86.722	ENSNGAG00000012203	Tnrc6c	98	86.775	Nannospalax_galili
ENSNLEG00000000047	TNRC6C	93	47.772	ENSNBRG00000005344	tnrc6c1	99	48.045	Neolamprologus_brichardi
ENSNLEG00000000047	TNRC6C	89	76.976	ENSMEUG00000005104	TNRC6C	99	90.625	Notamacropus_eugenii
ENSNLEG00000000047	TNRC6C	89	87.421	ENSODEG00000012499	TNRC6C	100	87.594	Octodon_degus
ENSNLEG00000000047	TNRC6C	84	48.325	ENSONIG00000002210	tnrc6c1	100	48.318	Oreochromis_niloticus
ENSNLEG00000000047	TNRC6C	99	60.631	ENSOANG00000009758	-	99	60.694	Ornithorhynchus_anatinus
ENSNLEG00000000047	TNRC6C	93	44.716	ENSORLG00000009837	tnrc6c1	100	66.914	Oryzias_latipes
ENSNLEG00000000047	TNRC6C	93	45.436	ENSORLG00020016510	tnrc6c1	100	47.257	Oryzias_latipes_hni
ENSNLEG00000000047	TNRC6C	74	40.521	ENSORLG00015000171	tnrc6c1	98	41.396	Oryzias_latipes_hsok
ENSNLEG00000000047	TNRC6C	93	46.290	ENSOMEG00000000357	tnrc6c1	99	46.670	Oryzias_melastigma
ENSNLEG00000000047	TNRC6C	89	89.671	ENSOGAG00000007197	TNRC6C	100	89.786	Otolemur_garnettii
ENSNLEG00000000047	TNRC6C	95	82.120	ENSOARG00000006041	TNRC6C	96	82.749	Ovis_aries
ENSNLEG00000000047	TNRC6C	99	95.767	ENSPPAG00000027160	TNRC6C	100	95.903	Pan_paniscus
ENSNLEG00000000047	TNRC6C	99	86.489	ENSPPRG00000018881	TNRC6C	98	86.594	Panthera_pardus
ENSNLEG00000000047	TNRC6C	88	85.676	ENSPTIG00000008791	TNRC6C	90	85.676	Panthera_tigris_altaica
ENSNLEG00000000047	TNRC6C	99	96.654	ENSPTRG00000009699	TNRC6C	100	95.903	Pan_troglodytes
ENSNLEG00000000047	TNRC6C	99	96.393	ENSPANG00000019994	TNRC6C	99	96.393	Papio_anubis
ENSNLEG00000000047	TNRC6C	53	64.394	ENSPKIG00000005428	tnrc6c1	100	52.121	Paramormyrops_kingsleyae
ENSNLEG00000000047	TNRC6C	92	81.961	ENSPSIG00000018069	TNRC6C	99	82.073	Pelodiscus_sinensis
ENSNLEG00000000047	TNRC6C	67	57.294	ENSPMGG00000022911	tnrc6c1	97	62.449	Periophthalmus_magnuspinnatus
ENSNLEG00000000047	TNRC6C	99	86.827	ENSPEMG00000009785	Tnrc6c	98	86.984	Peromyscus_maniculatus_bairdii
ENSNLEG00000000047	TNRC6C	50	84.671	ENSPCIG00000017421	-	99	84.259	Phascolarctos_cinereus
ENSNLEG00000000047	TNRC6C	96	46.345	ENSPFOG00000012560	tnrc6c1	95	54.723	Poecilia_formosa
ENSNLEG00000000047	TNRC6C	89	48.334	ENSPLAG00000021055	tnrc6c1	100	48.615	Poecilia_latipinna
ENSNLEG00000000047	TNRC6C	99	95.511	ENSPPYG00000008679	TNRC6C	98	95.511	Pongo_abelii
ENSNLEG00000000047	TNRC6C	86	85.033	ENSPCAG00000012510	TNRC6C	94	84.816	Procavia_capensis
ENSNLEG00000000047	TNRC6C	89	91.806	ENSPCOG00000021451	TNRC6C	100	91.979	Propithecus_coquereli
ENSNLEG00000000047	TNRC6C	88	88.136	ENSPVAG00000002008	TNRC6C	95	88.136	Pteropus_vampyrus
ENSNLEG00000000047	TNRC6C	93	48.963	ENSPNYG00000014477	tnrc6c1	99	47.178	Pundamilia_nyererei
ENSNLEG00000000047	TNRC6C	89	85.360	ENSRNOG00000022395	Tnrc6c	100	85.533	Rattus_norvegicus
ENSNLEG00000000047	TNRC6C	99	95.944	ENSRBIG00000027777	TNRC6C	100	95.672	Rhinopithecus_bieti
ENSNLEG00000000047	TNRC6C	99	95.996	ENSRROG00000042912	TNRC6C	100	95.730	Rhinopithecus_roxellana
ENSNLEG00000000047	TNRC6C	99	94.376	ENSSBOG00000023981	TNRC6C	100	94.634	Saimiri_boliviensis_boliviensis
ENSNLEG00000000047	TNRC6C	91	55.034	ENSSFOG00015006475	tnrc6c1	99	50.528	Scleropages_formosus
ENSNLEG00000000047	TNRC6C	80	53.564	ENSSFOG00015004735	-	99	59.398	Scleropages_formosus
ENSNLEG00000000047	TNRC6C	93	45.060	ENSSMAG00000012761	tnrc6c1	99	47.856	Scophthalmus_maximus
ENSNLEG00000000047	TNRC6C	93	46.887	ENSSDUG00000002366	tnrc6c1	99	48.038	Seriola_dumerili
ENSNLEG00000000047	TNRC6C	89	46.690	ENSSLDG00000025613	tnrc6c1	100	47.040	Seriola_lalandi_dorsalis
ENSNLEG00000000047	TNRC6C	85	87.395	ENSSARG00000006816	TNRC6C	89	87.395	Sorex_araneus
ENSNLEG00000000047	TNRC6C	81	84.514	ENSSPUG00000007341	TNRC6C	98	84.236	Sphenodon_punctatus
ENSNLEG00000000047	TNRC6C	70	51.209	ENSSPAG00000014977	tnrc6c1	97	47.289	Stegastes_partitus
ENSNLEG00000000047	TNRC6C	89	82.584	ENSSSCG00000034373	TNRC6C	100	82.872	Sus_scrofa
ENSNLEG00000000047	TNRC6C	92	83.772	ENSTGUG00000007733	TNRC6C	99	83.772	Taeniopygia_guttata
ENSNLEG00000000047	TNRC6C	70	52.821	ENSTRUG00000011685	tnrc6c1	100	47.944	Takifugu_rubripes
ENSNLEG00000000047	TNRC6C	88	51.092	ENSTNIG00000005273	tnrc6c1	100	58.447	Tetraodon_nigroviridis
ENSNLEG00000000047	TNRC6C	60	74.916	ENSTBEG00000005046	TNRC6C	100	75.676	Tupaia_belangeri
ENSNLEG00000000047	TNRC6C	92	86.122	ENSTTRG00000010828	TNRC6C	99	86.290	Tursiops_truncatus
ENSNLEG00000000047	TNRC6C	99	86.753	ENSUMAG00000013614	TNRC6C	99	87.827	Ursus_maritimus
ENSNLEG00000000047	TNRC6C	89	87.032	ENSVVUG00000015268	TNRC6C	100	87.147	Vulpes_vulpes
ENSNLEG00000000047	TNRC6C	89	71.069	ENSXETG00000019470	tnrc6c	100	70.898	Xenopus_tropicalis
ENSNLEG00000000047	TNRC6C	96	46.553	ENSXMAG00000025971	tnrc6c1	99	47.572	Xiphophorus_maculatus