EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000000625 (Gene tree)
Gene ID: 101178144
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 46757 bases
Position: chr22a:9558724-9605480
Accession: 101178144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000034308	PAP_RNA-bind	PF04926.15	1.6e-11	1	1
ENSNLEP00000034851	PAP_RNA-bind	PF04926.15	1.7e-11	1	1
ENSNLEP00000031492	PAP_RNA-bind	PF04926.15	1.8e-09	1	1
ENSNLEP00000000745	PAP_RNA-bind	PF04926.15	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000054884	PAPOLA-203	2061	-	ENSNLEP00000034308	686 (aa)	-	A0A2I3GSJ3
ENSNLET00000039960	PAPOLA-205	843	-	ENSNLEP00000041293	280 (aa)	-	A0A2I3HCB1
ENSNLET00000042871	PAPOLA-202	2136	-	ENSNLEP00000031492	711 (aa)	-	A0A2I3GJR1
ENSNLET00000000791	PAPOLA-201	2199	XM_012498145	ENSNLEP00000000745	732 (aa)	XP_012353599	G1QIK2
ENSNLET00000046215	PAPOLA-204	2031	-	ENSNLEP00000034851	676 (aa)	-	A0A2I3GU48

Gene Model

Click here to download ENSNLEG00000000625's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000000625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000000625	PAPOLA	61	76.887	ENSNLEG00000009507	-	97	76.887

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000000625	PAPOLA	100	94.681	ENSG00000090060	PAPOLA	97	99.639	Homo_sapiens
ENSNLEG00000000625	PAPOLA	99	92.829	ENSAMEG00000014142	PAPOLA	99	92.829	Ailuropoda_melanoleuca
ENSNLEG00000000625	PAPOLA	99	86.056	ENSAPLG00000006645	PAPOLA	99	85.638	Anas_platyrhynchos
ENSNLEG00000000625	PAPOLA	99	86.569	ENSACAG00000013474	PAPOLA	99	89.189	Anolis_carolinensis
ENSNLEG00000000625	PAPOLA	77	84.843	ENSANAG00000027941	-	98	85.028	Aotus_nancymaae
ENSNLEG00000000625	PAPOLA	100	94.415	ENSANAG00000018274	PAPOLA	100	94.415	Aotus_nancymaae
ENSNLEG00000000625	PAPOLA	100	69.602	ENSAMXG00000018141	papola	99	80.357	Astyanax_mexicanus
ENSNLEG00000000625	PAPOLA	100	92.287	ENSBTAG00000004054	PAPOLA	99	92.390	Bos_taurus
ENSNLEG00000000625	PAPOLA	100	94.282	ENSCJAG00000006512	PAPOLA	100	94.282	Callithrix_jacchus
ENSNLEG00000000625	PAPOLA	99	92.943	ENSCAFG00000017783	PAPOLA	99	92.943	Canis_familiaris
ENSNLEG00000000625	PAPOLA	99	92.933	ENSCAFG00020011550	PAPOLA	99	92.800	Canis_lupus_dingo
ENSNLEG00000000625	PAPOLA	99	92.523	ENSCHIG00000025004	-	99	92.523	Capra_hircus
ENSNLEG00000000625	PAPOLA	99	92.011	ENSTSYG00000012384	PAPOLA	99	92.011	Carlito_syrichta
ENSNLEG00000000625	PAPOLA	100	88.564	ENSCPOG00000002648	PAPOLA	99	88.564	Cavia_porcellus
ENSNLEG00000000625	PAPOLA	100	94.415	ENSCCAG00000025120	PAPOLA	99	94.415	Cebus_capucinus
ENSNLEG00000000625	PAPOLA	100	94.681	ENSCATG00000018815	PAPOLA	100	94.681	Cercocebus_atys
ENSNLEG00000000625	PAPOLA	100	92.420	ENSCLAG00000016342	PAPOLA	100	92.420	Chinchilla_lanigera
ENSNLEG00000000625	PAPOLA	100	94.548	ENSCSAG00000010516	PAPOLA	99	94.548	Chlorocebus_sabaeus
ENSNLEG00000000625	PAPOLA	70	81.595	ENSCHOG00000001115	PAPOLA	71	82.099	Choloepus_hoffmanni
ENSNLEG00000000625	PAPOLA	100	87.649	ENSCPBG00000024125	PAPOLA	99	87.649	Chrysemys_picta_bellii
ENSNLEG00000000625	PAPOLA	100	89.495	ENSCANG00000000159	PAPOLA	100	89.495	Colobus_angolensis_palliatus
ENSNLEG00000000625	PAPOLA	100	82.979	ENSCGRG00001000229	-	99	85.275	Cricetulus_griseus_chok1gshd
ENSNLEG00000000625	PAPOLA	99	79.250	ENSCGRG00001002732	-	99	79.250	Cricetulus_griseus_chok1gshd
ENSNLEG00000000625	PAPOLA	100	91.076	ENSCGRG00001022693	-	99	91.076	Cricetulus_griseus_chok1gshd
ENSNLEG00000000625	PAPOLA	98	76.975	ENSCGRG00000001888	-	96	76.431	Cricetulus_griseus_crigri
ENSNLEG00000000625	PAPOLA	100	79.577	ENSCGRG00000000257	-	99	79.577	Cricetulus_griseus_crigri
ENSNLEG00000000625	PAPOLA	100	90.293	ENSCGRG00000003664	-	100	91.206	Cricetulus_griseus_crigri
ENSNLEG00000000625	PAPOLA	88	47.525	ENSCSEG00000001841	-	81	49.909	Cynoglossus_semilaevis
ENSNLEG00000000625	PAPOLA	100	67.667	ENSDARG00000009585	papola	99	67.258	Danio_rerio
ENSNLEG00000000625	PAPOLA	65	81.520	ENSDORG00000013415	-	100	82.752	Dipodomys_ordii
ENSNLEG00000000625	PAPOLA	99	78.989	ENSETEG00000004889	PAPOLA	100	78.856	Echinops_telfairi
ENSNLEG00000000625	PAPOLA	100	65.354	ENSELUG00000018972	papola	98	66.129	Esox_lucius
ENSNLEG00000000625	PAPOLA	100	93.218	ENSFCAG00000006784	PAPOLA	99	93.218	Felis_catus
ENSNLEG00000000625	PAPOLA	99	93.750	ENSFALG00000002547	PAPOLA	91	93.750	Ficedula_albicollis
ENSNLEG00000000625	PAPOLA	99	90.849	ENSFDAG00000010370	PAPOLA	100	90.849	Fukomys_damarensis
ENSNLEG00000000625	PAPOLA	73	61.002	ENSGMOG00000010209	papola	100	62.172	Gadus_morhua
ENSNLEG00000000625	PAPOLA	100	85.126	ENSGALG00000033099	PAPOLA	99	85.126	Gallus_gallus
ENSNLEG00000000625	PAPOLA	71	51.738	ENSGACG00000006142	-	100	51.329	Gasterosteus_aculeatus
ENSNLEG00000000625	PAPOLA	93	89.755	ENSGAGG00000020500	PAPOLA	99	89.537	Gopherus_agassizii
ENSNLEG00000000625	PAPOLA	100	96.892	ENSGGOG00000006287	PAPOLA	100	96.892	Gorilla_gorilla
ENSNLEG00000000625	PAPOLA	99	82.726	ENSHGLG00000017457	-	100	81.916	Heterocephalus_glaber_female
ENSNLEG00000000625	PAPOLA	100	74.069	ENSHGLG00000007467	-	99	73.670	Heterocephalus_glaber_female
ENSNLEG00000000625	PAPOLA	100	91.622	ENSHGLG00000007909	-	99	91.622	Heterocephalus_glaber_female
ENSNLEG00000000625	PAPOLA	100	91.489	ENSHGLG00100017273	PAPOLA	99	91.555	Heterocephalus_glaber_male
ENSNLEG00000000625	PAPOLA	99	65.119	ENSIPUG00000005919	papola	99	64.187	Ictalurus_punctatus
ENSNLEG00000000625	PAPOLA	100	92.819	ENSSTOG00000011471	PAPOLA	99	92.819	Ictidomys_tridecemlineatus
ENSNLEG00000000625	PAPOLA	99	92.005	ENSJJAG00000024340	Papola	100	91.773	Jaculus_jaculus
ENSNLEG00000000625	PAPOLA	99	72.751	ENSLACG00000018136	PAPOLA	99	72.751	Latimeria_chalumnae
ENSNLEG00000000625	PAPOLA	99	62.467	ENSLOCG00000008632	papola	99	62.599	Lepisosteus_oculatus
ENSNLEG00000000625	PAPOLA	99	91.744	ENSLAFG00000000946	PAPOLA	99	91.744	Loxodonta_africana
ENSNLEG00000000625	PAPOLA	100	94.548	ENSMFAG00000001792	PAPOLA	99	94.548	Macaca_fascicularis
ENSNLEG00000000625	PAPOLA	100	94.548	ENSMMUG00000018610	PAPOLA	100	94.334	Macaca_mulatta
ENSNLEG00000000625	PAPOLA	100	94.681	ENSMNEG00000043747	PAPOLA	100	94.681	Macaca_nemestrina
ENSNLEG00000000625	PAPOLA	100	94.548	ENSMLEG00000032066	PAPOLA	99	94.548	Mandrillus_leucophaeus
ENSNLEG00000000625	PAPOLA	84	83.359	ENSMGAG00000013228	-	100	83.359	Meleagris_gallopavo
ENSNLEG00000000625	PAPOLA	100	91.501	ENSMAUG00000017178	Papola	99	91.501	Mesocricetus_auratus
ENSNLEG00000000625	PAPOLA	100	92.952	ENSMICG00000010347	PAPOLA	99	92.952	Microcebus_murinus
ENSNLEG00000000625	PAPOLA	100	91.501	ENSMOCG00000021670	Papola	99	91.501	Microtus_ochrogaster
ENSNLEG00000000625	PAPOLA	99	79.363	ENSMODG00000001969	-	99	79.363	Monodelphis_domestica
ENSNLEG00000000625	PAPOLA	100	91.478	ENSMODG00000012887	-	99	91.478	Monodelphis_domestica
ENSNLEG00000000625	PAPOLA	100	90.571	MGP_CAROLIEiJ_G0018093	Papola	99	90.571	Mus_caroli
ENSNLEG00000000625	PAPOLA	100	90.793	ENSMUSG00000021111	Papola	99	90.793	Mus_musculus
ENSNLEG00000000625	PAPOLA	100	90.793	MGP_PahariEiJ_G0029850	Papola	99	90.793	Mus_pahari
ENSNLEG00000000625	PAPOLA	100	90.935	MGP_SPRETEiJ_G0018943	Papola	99	90.935	Mus_spretus
ENSNLEG00000000625	PAPOLA	100	92.952	ENSMPUG00000003054	PAPOLA	99	92.952	Mustela_putorius_furo
ENSNLEG00000000625	PAPOLA	100	90.957	ENSMLUG00000010922	PAPOLA	99	90.957	Myotis_lucifugus
ENSNLEG00000000625	PAPOLA	100	92.000	ENSNGAG00000022172	Papola	100	91.478	Nannospalax_galili
ENSNLEG00000000625	PAPOLA	68	86.232	ENSMEUG00000007831	-	74	85.714	Notamacropus_eugenii
ENSNLEG00000000625	PAPOLA	98	86.531	ENSOPRG00000007625	PAPOLA	100	86.531	Ochotona_princeps
ENSNLEG00000000625	PAPOLA	70	52.101	ENSONIG00000001062	-	96	52.101	Oreochromis_niloticus
ENSNLEG00000000625	PAPOLA	99	91.348	ENSOANG00000013812	PAPOLA	99	91.348	Ornithorhynchus_anatinus
ENSNLEG00000000625	PAPOLA	99	91.223	ENSOCUG00000011531	PAPOLA	99	91.223	Oryctolagus_cuniculus
ENSNLEG00000000625	PAPOLA	100	92.686	ENSOGAG00000004611	PAPOLA	99	92.686	Otolemur_garnettii
ENSNLEG00000000625	PAPOLA	100	92.287	ENSOARG00000016579	-	99	92.287	Ovis_aries
ENSNLEG00000000625	PAPOLA	100	96.757	ENSPPAG00000030505	PAPOLA	100	96.757	Pan_paniscus
ENSNLEG00000000625	PAPOLA	100	93.218	ENSPPRG00000008616	PAPOLA	99	93.218	Panthera_pardus
ENSNLEG00000000625	PAPOLA	99	93.342	ENSPTIG00000018852	PAPOLA	99	93.342	Panthera_tigris_altaica
ENSNLEG00000000625	PAPOLA	100	96.892	ENSPTRG00000006704	PAPOLA	100	96.892	Pan_troglodytes
ENSNLEG00000000625	PAPOLA	100	94.681	ENSPANG00000025582	PAPOLA	100	94.681	Papio_anubis
ENSNLEG00000000625	PAPOLA	100	67.663	ENSPKIG00000014471	papola	99	68.913	Paramormyrops_kingsleyae
ENSNLEG00000000625	PAPOLA	100	87.915	ENSPSIG00000014157	PAPOLA	87	87.915	Pelodiscus_sinensis
ENSNLEG00000000625	PAPOLA	100	91.286	ENSPEMG00000000043	Papola	99	91.360	Peromyscus_maniculatus_bairdii
ENSNLEG00000000625	PAPOLA	100	91.090	ENSPCIG00000013234	PAPOLA	99	91.090	Phascolarctos_cinereus
ENSNLEG00000000625	PAPOLA	99	92.543	ENSPPYG00000006128	PAPOLA	99	92.543	Pongo_abelii
ENSNLEG00000000625	PAPOLA	89	84.799	ENSPCAG00000004199	PAPOLA	100	84.799	Procavia_capensis
ENSNLEG00000000625	PAPOLA	100	89.761	ENSPCOG00000022117	PAPOLA	99	89.761	Propithecus_coquereli
ENSNLEG00000000625	PAPOLA	100	91.489	ENSPVAG00000013925	PAPOLA	99	91.489	Pteropus_vampyrus
ENSNLEG00000000625	PAPOLA	100	67.872	ENSPNAG00000010467	papola	99	68.289	Pygocentrus_nattereri
ENSNLEG00000000625	PAPOLA	100	90.027	ENSRNOG00000004827	Papola	99	90.027	Rattus_norvegicus
ENSNLEG00000000625	PAPOLA	100	94.587	ENSRBIG00000038490	PAPOLA	100	94.587	Rhinopithecus_bieti
ENSNLEG00000000625	PAPOLA	100	94.415	ENSRROG00000025545	PAPOLA	99	94.415	Rhinopithecus_roxellana
ENSNLEG00000000625	PAPOLA	100	94.681	ENSSBOG00000024061	PAPOLA	100	94.681	Saimiri_boliviensis_boliviensis
ENSNLEG00000000625	PAPOLA	99	91.333	ENSSHAG00000015211	PAPOLA	99	91.333	Sarcophilus_harrisii
ENSNLEG00000000625	PAPOLA	98	68.194	ENSSFOG00015004431	papola	99	80.179	Scleropages_formosus
ENSNLEG00000000625	PAPOLA	97	47.500	ENSSDUG00000018247	-	97	46.765	Seriola_dumerili
ENSNLEG00000000625	PAPOLA	98	87.398	ENSSPUG00000005835	PAPOLA	99	87.251	Sphenodon_punctatus
ENSNLEG00000000625	PAPOLA	100	93.218	ENSSSCG00000002505	-	99	93.218	Sus_scrofa
ENSNLEG00000000625	PAPOLA	99	85.904	ENSTGUG00000012687	PAPOLA	99	85.353	Taeniopygia_guttata
ENSNLEG00000000625	PAPOLA	75	86.592	ENSTBEG00000000194	PAPOLA	75	86.592	Tupaia_belangeri
ENSNLEG00000000625	PAPOLA	79	98.701	ENSTTRG00000005717	PAPOLA	78	98.701	Tursiops_truncatus
ENSNLEG00000000625	PAPOLA	62	93.271	ENSUAMG00000025737	PAPOLA	98	93.503	Ursus_americanus
ENSNLEG00000000625	PAPOLA	99	92.277	ENSVPAG00000006464	PAPOLA	100	92.277	Vicugna_pacos
ENSNLEG00000000625	PAPOLA	100	92.819	ENSVVUG00000028340	PAPOLA	99	92.819	Vulpes_vulpes
ENSNLEG00000000625	PAPOLA	100	78.238	ENSXETG00000013949	papola	99	78.649	Xenopus_tropicalis