EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001026 (Gene tree)
Gene ID: 100588705
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 181335 bases
Position: chr2:70116266-70297600
Accession: 100588705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000001211	ResIII	PF04851.15	6e-06	1	1
ENSNLEP00000001211	BRK	PF07533.16	1.2e-30	1	2
ENSNLEP00000001211	BRK	PF07533.16	1.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000001279	CHD9-201	7821	XM_012505095	ENSNLEP00000001211	2607 (aa)	XP_012360549	G1QJW6
ENSNLET00000034365	CHD9-202	1461	-	ENSNLEP00000029958	486 (aa)	-	A0A2I3GFA7

Gene Model

Click here to download ENSNLEG00000001026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001026	CHD9	70	62.232	ENSNLEG00000006496	CHD6	71	62.194
ENSNLEG00000001026	CHD9	71	68.388	ENSNLEG00000014445	CHD8	80	68.559
ENSNLEG00000001026	CHD9	86	70.381	ENSNLEG00000002027	CHD7	79	66.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001026	CHD9	100	99.348	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSNLEG00000001026	CHD9	86	72.562	ENSAPOG00000023034	chd9	86	71.592	Acanthochromis_polyacanthus
ENSNLEG00000001026	CHD9	100	96.476	ENSAMEG00000016232	CHD9	90	96.476	Ailuropoda_melanoleuca
ENSNLEG00000001026	CHD9	80	70.671	ENSACIG00000004097	chd9	73	61.101	Amphilophus_citrinellus
ENSNLEG00000001026	CHD9	80	72.973	ENSAOCG00000005487	chd9	89	62.246	Amphiprion_ocellaris
ENSNLEG00000001026	CHD9	85	72.804	ENSAPEG00000009859	chd9	89	62.816	Amphiprion_percula
ENSNLEG00000001026	CHD9	85	72.952	ENSATEG00000002748	chd9	89	63.552	Anabas_testudineus
ENSNLEG00000001026	CHD9	100	84.642	ENSAPLG00000002826	CHD9	74	85.969	Anas_platyrhynchos
ENSNLEG00000001026	CHD9	82	83.107	ENSACAG00000016150	CHD9	89	82.353	Anolis_carolinensis
ENSNLEG00000001026	CHD9	100	98.427	ENSANAG00000015630	CHD9	90	98.427	Aotus_nancymaae
ENSNLEG00000001026	CHD9	80	72.118	ENSACLG00000016899	chd9	73	63.599	Astatotilapia_calliptera
ENSNLEG00000001026	CHD9	99	63.348	ENSAMXG00000005652	chd9	68	74.940	Astyanax_mexicanus
ENSNLEG00000001026	CHD9	100	96.054	ENSBTAG00000002287	CHD9	90	96.054	Bos_taurus
ENSNLEG00000001026	CHD9	100	97.546	ENSCJAG00000001573	CHD9	90	97.546	Callithrix_jacchus
ENSNLEG00000001026	CHD9	100	96.550	ENSCAFG00000009699	CHD9	90	96.550	Canis_familiaris
ENSNLEG00000001026	CHD9	100	96.550	ENSCAFG00020002879	CHD9	90	96.550	Canis_lupus_dingo
ENSNLEG00000001026	CHD9	100	96.819	ENSTSYG00000007693	CHD9	90	96.819	Carlito_syrichta
ENSNLEG00000001026	CHD9	79	79.093	ENSCAPG00000011604	CHD9	70	79.345	Cavia_aperea
ENSNLEG00000001026	CHD9	100	91.801	ENSCPOG00000036544	CHD9	90	90.958	Cavia_porcellus
ENSNLEG00000001026	CHD9	100	97.660	ENSCCAG00000036178	CHD9	90	97.660	Cebus_capucinus
ENSNLEG00000001026	CHD9	100	98.504	ENSCATG00000036753	CHD9	90	98.504	Cercocebus_atys
ENSNLEG00000001026	CHD9	100	95.479	ENSCLAG00000007137	CHD9	99	97.457	Chinchilla_lanigera
ENSNLEG00000001026	CHD9	100	99.041	ENSCSAG00000005311	CHD9	90	99.041	Chlorocebus_sabaeus
ENSNLEG00000001026	CHD9	71	98.077	ENSCHOG00000003935	CHD9	66	98.077	Choloepus_hoffmanni
ENSNLEG00000001026	CHD9	100	86.217	ENSCPBG00000012459	CHD9	99	84.376	Chrysemys_picta_bellii
ENSNLEG00000001026	CHD9	100	99.041	ENSCANG00000030349	CHD9	90	99.041	Colobus_angolensis_palliatus
ENSNLEG00000001026	CHD9	100	92.986	ENSCGRG00001016150	Chd9	90	92.334	Cricetulus_griseus_chok1gshd
ENSNLEG00000001026	CHD9	100	92.986	ENSCGRG00000012850	Chd9	99	96.301	Cricetulus_griseus_crigri
ENSNLEG00000001026	CHD9	85	70.801	ENSCSEG00000009209	chd9	67	72.484	Cynoglossus_semilaevis
ENSNLEG00000001026	CHD9	86	72.015	ENSCVAG00000016195	chd9	89	61.757	Cyprinodon_variegatus
ENSNLEG00000001026	CHD9	80	71.301	ENSDARG00000074498	chd9	67	73.947	Danio_rerio
ENSNLEG00000001026	CHD9	79	95.777	ENSDNOG00000006045	CHD9	88	95.777	Dasypus_novemcinctus
ENSNLEG00000001026	CHD9	66	94.364	ENSDORG00000008523	-	85	93.144	Dipodomys_ordii
ENSNLEG00000001026	CHD9	93	97.368	ENSETEG00000009565	CHD9	84	97.368	Echinops_telfairi
ENSNLEG00000001026	CHD9	100	96.359	ENSEASG00005014832	CHD9	98	93.714	Equus_asinus_asinus
ENSNLEG00000001026	CHD9	100	96.284	ENSECAG00000011505	CHD9	90	96.284	Equus_caballus
ENSNLEG00000001026	CHD9	86	97.790	ENSEEUG00000014515	CHD9	81	97.790	Erinaceus_europaeus
ENSNLEG00000001026	CHD9	81	71.561	ENSELUG00000006031	chd9	85	70.910	Esox_lucius
ENSNLEG00000001026	CHD9	100	96.397	ENSFCAG00000022534	CHD9	90	96.397	Felis_catus
ENSNLEG00000001026	CHD9	82	89.671	ENSFALG00000013276	CHD9	88	90.094	Ficedula_albicollis
ENSNLEG00000001026	CHD9	100	95.172	ENSFDAG00000021037	CHD9	90	94.713	Fukomys_damarensis
ENSNLEG00000001026	CHD9	86	71.335	ENSFHEG00000006068	chd9	87	71.627	Fundulus_heteroclitus
ENSNLEG00000001026	CHD9	70	77.001	ENSGMOG00000006040	chd9	78	77.069	Gadus_morhua
ENSNLEG00000001026	CHD9	100	85.840	ENSGALG00000039178	CHD9	92	86.184	Gallus_gallus
ENSNLEG00000001026	CHD9	85	71.968	ENSGAFG00000010014	chd9	85	71.061	Gambusia_affinis
ENSNLEG00000001026	CHD9	80	69.818	ENSGACG00000016694	chd9	68	74.802	Gasterosteus_aculeatus
ENSNLEG00000001026	CHD9	100	99.118	ENSGGOG00000014816	CHD9	90	99.118	Gorilla_gorilla
ENSNLEG00000001026	CHD9	80	72.540	ENSHBUG00000023322	chd9	67	74.895	Haplochromis_burtoni
ENSNLEG00000001026	CHD9	100	95.211	ENSHGLG00000014938	CHD9	99	97.919	Heterocephalus_glaber_female
ENSNLEG00000001026	CHD9	92	67.783	ENSHCOG00000000937	chd9	69	73.448	Hippocampus_comes
ENSNLEG00000001026	CHD9	81	72.383	ENSIPUG00000016448	chd9	71	73.723	Ictalurus_punctatus
ENSNLEG00000001026	CHD9	100	96.052	ENSSTOG00000022273	CHD9	99	98.266	Ictidomys_tridecemlineatus
ENSNLEG00000001026	CHD9	66	94.712	ENSJJAG00000015741	-	85	94.712	Jaculus_jaculus
ENSNLEG00000001026	CHD9	86	71.950	ENSKMAG00000016784	chd9	89	61.536	Kryptolebias_marmoratus
ENSNLEG00000001026	CHD9	80	72.000	ENSLBEG00000012077	chd9	86	70.717	Labrus_bergylta
ENSNLEG00000001026	CHD9	100	72.342	ENSLACG00000005557	CHD9	73	72.215	Latimeria_chalumnae
ENSNLEG00000001026	CHD9	87	75.485	ENSLOCG00000007225	chd9	87	76.054	Lepisosteus_oculatus
ENSNLEG00000001026	CHD9	100	95.364	ENSLAFG00000015374	CHD9	90	95.364	Loxodonta_africana
ENSNLEG00000001026	CHD9	100	99.118	ENSMFAG00000041354	CHD9	90	99.118	Macaca_fascicularis
ENSNLEG00000001026	CHD9	100	99.156	ENSMMUG00000016310	CHD9	90	99.156	Macaca_mulatta
ENSNLEG00000001026	CHD9	100	99.080	ENSMNEG00000031494	CHD9	100	99.029	Macaca_nemestrina
ENSNLEG00000001026	CHD9	100	99.233	ENSMLEG00000043219	CHD9	90	99.233	Mandrillus_leucophaeus
ENSNLEG00000001026	CHD9	86	71.550	ENSMAMG00000003909	chd9	89	61.868	Mastacembelus_armatus
ENSNLEG00000001026	CHD9	85	72.892	ENSMZEG00005006581	chd9	85	71.861	Maylandia_zebra
ENSNLEG00000001026	CHD9	95	80.072	ENSMGAG00000004642	CHD9	72	80.903	Meleagris_gallopavo
ENSNLEG00000001026	CHD9	100	96.435	ENSMICG00000016679	CHD9	90	96.435	Microcebus_murinus
ENSNLEG00000001026	CHD9	69	90.703	ENSMODG00000013142	-	85	92.235	Monodelphis_domestica
ENSNLEG00000001026	CHD9	80	72.214	ENSMALG00000013306	chd9	73	62.194	Monopterus_albus
ENSNLEG00000001026	CHD9	100	91.418	MGP_CAROLIEiJ_G0031364	Chd9	90	90.996	Mus_caroli
ENSNLEG00000001026	CHD9	100	91.418	ENSMUSG00000056608	Chd9	99	95.376	Mus_musculus
ENSNLEG00000001026	CHD9	100	89.004	MGP_PahariEiJ_G0022964	Chd9	90	88.774	Mus_pahari
ENSNLEG00000001026	CHD9	100	91.188	MGP_SPRETEiJ_G0032483	Chd9	90	90.805	Mus_spretus
ENSNLEG00000001026	CHD9	100	96.704	ENSMPUG00000003285	CHD9	90	96.704	Mustela_putorius_furo
ENSNLEG00000001026	CHD9	100	94.366	ENSMLUG00000004456	CHD9	90	93.944	Myotis_lucifugus
ENSNLEG00000001026	CHD9	85	72.507	ENSNBRG00000009423	chd9	85	71.435	Neolamprologus_brichardi
ENSNLEG00000001026	CHD9	84	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSNLEG00000001026	CHD9	84	97.143	ENSOPRG00000011168	CHD9	76	97.143	Ochotona_princeps
ENSNLEG00000001026	CHD9	100	95.021	ENSODEG00000004466	CHD9	90	94.638	Octodon_degus
ENSNLEG00000001026	CHD9	80	73.271	ENSONIG00000002816	chd9	87	62.885	Oreochromis_niloticus
ENSNLEG00000001026	CHD9	100	86.519	ENSOANG00000013401	CHD9	90	86.710	Ornithorhynchus_anatinus
ENSNLEG00000001026	CHD9	81	97.693	ENSOCUG00000001016	CHD9	87	97.693	Oryctolagus_cuniculus
ENSNLEG00000001026	CHD9	85	72.186	ENSORLG00000013810	chd9	89	61.544	Oryzias_latipes
ENSNLEG00000001026	CHD9	85	72.199	ENSORLG00015019126	chd9	85	71.180	Oryzias_latipes_hsok
ENSNLEG00000001026	CHD9	51	77.599	ENSOMEG00000015978	chd9	99	62.957	Oryzias_melastigma
ENSNLEG00000001026	CHD9	100	95.712	ENSOGAG00000002110	CHD9	90	94.985	Otolemur_garnettii
ENSNLEG00000001026	CHD9	100	95.790	ENSOARG00000017664	CHD9	90	95.790	Ovis_aries
ENSNLEG00000001026	CHD9	81	98.536	ENSPPAG00000039388	-	88	98.536	Pan_paniscus
ENSNLEG00000001026	CHD9	100	96.435	ENSPPRG00000004801	CHD9	90	96.435	Panthera_pardus
ENSNLEG00000001026	CHD9	100	95.209	ENSPTIG00000021854	CHD9	90	95.209	Panthera_tigris_altaica
ENSNLEG00000001026	CHD9	100	99.463	ENSPTRG00000008113	CHD9	90	99.463	Pan_troglodytes
ENSNLEG00000001026	CHD9	100	99.156	ENSPANG00000019307	CHD9	90	99.156	Papio_anubis
ENSNLEG00000001026	CHD9	100	60.390	ENSPKIG00000025401	-	71	62.871	Paramormyrops_kingsleyae
ENSNLEG00000001026	CHD9	100	64.200	ENSPKIG00000021876	chd9	68	76.675	Paramormyrops_kingsleyae
ENSNLEG00000001026	CHD9	71	84.865	ENSPSIG00000008099	CHD9	99	84.811	Pelodiscus_sinensis
ENSNLEG00000001026	CHD9	66	57.290	ENSPMAG00000006035	-	72	67.923	Petromyzon_marinus
ENSNLEG00000001026	CHD9	99	88.087	ENSPCIG00000017215	CHD9	97	89.952	Phascolarctos_cinereus
ENSNLEG00000001026	CHD9	85	71.909	ENSPFOG00000015839	chd9	81	68.518	Poecilia_formosa
ENSNLEG00000001026	CHD9	85	72.002	ENSPLAG00000011118	chd9	85	71.725	Poecilia_latipinna
ENSNLEG00000001026	CHD9	85	72.372	ENSPMEG00000015106	chd9	81	68.885	Poecilia_mexicana
ENSNLEG00000001026	CHD9	85	72.997	ENSPREG00000006473	chd9	85	70.956	Poecilia_reticulata
ENSNLEG00000001026	CHD9	100	99.463	ENSPPYG00000007348	CHD9	90	99.463	Pongo_abelii
ENSNLEG00000001026	CHD9	86	96.415	ENSPCAG00000007564	CHD9	86	96.415	Procavia_capensis
ENSNLEG00000001026	CHD9	100	95.362	ENSPCOG00000028433	CHD9	90	95.362	Propithecus_coquereli
ENSNLEG00000001026	CHD9	97	95.065	ENSPVAG00000015617	CHD9	87	95.065	Pteropus_vampyrus
ENSNLEG00000001026	CHD9	85	72.799	ENSPNYG00000010947	chd9	66	75.656	Pundamilia_nyererei
ENSNLEG00000001026	CHD9	100	62.663	ENSPNAG00000024141	chd9	90	63.332	Pygocentrus_nattereri
ENSNLEG00000001026	CHD9	100	87.686	ENSRNOG00000049302	Chd9	100	90.286	Rattus_norvegicus
ENSNLEG00000001026	CHD9	81	99.246	ENSRBIG00000035553	CHD9	88	99.246	Rhinopithecus_bieti
ENSNLEG00000001026	CHD9	81	99.238	ENSRROG00000033278	CHD9	88	99.238	Rhinopithecus_roxellana
ENSNLEG00000001026	CHD9	100	98.236	ENSSBOG00000030240	CHD9	90	98.236	Saimiri_boliviensis_boliviensis
ENSNLEG00000001026	CHD9	100	88.341	ENSSHAG00000002719	CHD9	90	88.337	Sarcophilus_harrisii
ENSNLEG00000001026	CHD9	90	67.578	ENSSFOG00015001327	chd9	67	75.912	Scleropages_formosus
ENSNLEG00000001026	CHD9	100	63.150	ENSSFOG00015020209	chd9	87	72.727	Scleropages_formosus
ENSNLEG00000001026	CHD9	85	71.788	ENSSMAG00000008953	chd9	99	62.260	Scophthalmus_maximus
ENSNLEG00000001026	CHD9	85	71.961	ENSSDUG00000006139	chd9	85	70.956	Seriola_dumerili
ENSNLEG00000001026	CHD9	85	72.499	ENSSLDG00000017818	chd9	85	71.488	Seriola_lalandi_dorsalis
ENSNLEG00000001026	CHD9	97	94.421	ENSSARG00000010632	CHD9	71	97.603	Sorex_araneus
ENSNLEG00000001026	CHD9	85	72.439	ENSSPAG00000021649	chd9	67	74.896	Stegastes_partitus
ENSNLEG00000001026	CHD9	100	85.583	ENSTGUG00000007476	CHD9	100	85.927	Taeniopygia_guttata
ENSNLEG00000001026	CHD9	67	75.995	ENSTRUG00000009125	chd9	89	62.598	Takifugu_rubripes
ENSNLEG00000001026	CHD9	60	82.439	ENSTNIG00000003825	chd9	83	82.439	Tetraodon_nigroviridis
ENSNLEG00000001026	CHD9	73	96.396	ENSTBEG00000016052	-	81	96.396	Tupaia_belangeri
ENSNLEG00000001026	CHD9	100	95.439	ENSTTRG00000012674	CHD9	90	95.439	Tursiops_truncatus
ENSNLEG00000001026	CHD9	60	95.044	ENSUAMG00000022706	CHD9	84	95.044	Ursus_americanus
ENSNLEG00000001026	CHD9	100	94.156	ENSUMAG00000004043	CHD9	99	95.482	Ursus_maritimus
ENSNLEG00000001026	CHD9	97	95.141	ENSVPAG00000001374	CHD9	87	95.141	Vicugna_pacos
ENSNLEG00000001026	CHD9	100	96.627	ENSVVUG00000019435	CHD9	90	96.627	Vulpes_vulpes
ENSNLEG00000001026	CHD9	100	75.429	ENSXETG00000000349	chd9	96	76.908	Xenopus_tropicalis
ENSNLEG00000001026	CHD9	80	73.070	ENSXCOG00000012997	chd9	85	71.918	Xiphophorus_couchianus
ENSNLEG00000001026	CHD9	85	72.414	ENSXMAG00000016192	chd9	86	72.341	Xiphophorus_maculatus