EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001207 (Gene tree)
Gene ID: 100601807
Gene Symbol: -
Alias: RPABC1|RPB5|XAP4|hRPB25|hsRPB5
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 5885 bases
Position: chr17:98979586-98985470
Accession: 100601807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000037952	RNA_pol_Rpb5_N	PF03871.14	9.1e-35	1	1
ENSNLEP00000001458	RNA_pol_Rpb5_N	PF03871.14	1.2e-34	1	1
ENSNLEP00000001458	RNA_pol_Rpb5_C	PF01191.19	1.2e-34	1	1
ENSNLEP00000037952	RNA_pol_Rpb5_C	PF01191.19	3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000040349	-	555	-	ENSNLEP00000037952	184 (aa)	-	A0A2I3H3B4
ENSNLET00000001538	-	636	XM_004093237	ENSNLEP00000001458	211 (aa)	XP_004093285	G1QKL3

Gene Model

Click here to download ENSNLEG00000001207's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03020	RNA polymerase	KEGG
nle04623	Cytosolic DNA-sensing pathway	KEGG
nle05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001207	-	100	73.934	ENSNLEG00000031364	-	100	73.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001207	-	100	95.735	ENSG00000099817	POLR2E	100	95.735	Homo_sapiens
ENSNLEG00000001207	-	100	91.943	ENSAPOG00000002935	polr2eb	100	91.943	Acanthochromis_polyacanthus
ENSNLEG00000001207	-	100	96.209	ENSAMEG00000003159	POLR2E	100	96.209	Ailuropoda_melanoleuca
ENSNLEG00000001207	-	100	91.304	ENSACIG00000024371	polr2eb	100	91.304	Amphilophus_citrinellus
ENSNLEG00000001207	-	100	91.943	ENSAOCG00000018166	polr2eb	100	91.943	Amphiprion_ocellaris
ENSNLEG00000001207	-	100	91.943	ENSAPEG00000009000	polr2eb	100	91.943	Amphiprion_percula
ENSNLEG00000001207	-	100	91.943	ENSATEG00000023760	polr2eb	100	91.943	Anabas_testudineus
ENSNLEG00000001207	-	100	96.209	ENSANAG00000038488	POLR2E	100	96.209	Aotus_nancymaae
ENSNLEG00000001207	-	100	92.417	ENSACLG00000005254	polr2eb	100	92.417	Astatotilapia_calliptera
ENSNLEG00000001207	-	100	92.417	ENSAMXG00000018915	POLR2E	100	92.417	Astyanax_mexicanus
ENSNLEG00000001207	-	100	96.209	ENSBTAG00000020776	POLR2E	100	96.209	Bos_taurus
ENSNLEG00000001207	-	99	74.641	WBGene00019246	rpb-5	99	74.641	Caenorhabditis_elegans
ENSNLEG00000001207	-	67	90.071	ENSCJAG00000007666	-	77	90.071	Callithrix_jacchus
ENSNLEG00000001207	-	100	92.891	ENSCAFG00000019546	POLR2E	100	92.891	Canis_familiaris
ENSNLEG00000001207	-	100	96.209	ENSCAFG00020017111	POLR2E	100	96.209	Canis_lupus_dingo
ENSNLEG00000001207	-	100	96.209	ENSCHIG00000014151	POLR2E	100	96.209	Capra_hircus
ENSNLEG00000001207	-	100	78.241	ENSTSYG00000026377	POLR2E	100	78.241	Carlito_syrichta
ENSNLEG00000001207	-	91	95.855	ENSCAPG00000010843	POLR2E	93	95.855	Cavia_aperea
ENSNLEG00000001207	-	100	96.209	ENSCPOG00000001542	POLR2E	100	96.209	Cavia_porcellus
ENSNLEG00000001207	-	100	96.209	ENSCCAG00000025658	POLR2E	100	96.209	Cebus_capucinus
ENSNLEG00000001207	-	100	96.209	ENSCATG00000008926	POLR2E	100	96.209	Cercocebus_atys
ENSNLEG00000001207	-	100	95.735	ENSCLAG00000014874	-	100	95.735	Chinchilla_lanigera
ENSNLEG00000001207	-	98	72.816	ENSCLAG00000009238	-	100	72.816	Chinchilla_lanigera
ENSNLEG00000001207	-	100	96.209	ENSCSAG00000012336	POLR2E	100	96.209	Chlorocebus_sabaeus
ENSNLEG00000001207	-	100	95.735	ENSCPBG00000009702	POLR2E	100	95.735	Chrysemys_picta_bellii
ENSNLEG00000001207	-	100	83.412	ENSCING00000024933	-	99	83.412	Ciona_intestinalis
ENSNLEG00000001207	-	100	96.209	ENSCANG00000025560	POLR2E	100	96.209	Colobus_angolensis_palliatus
ENSNLEG00000001207	-	100	95.261	ENSCGRG00001022927	Polr2e	100	95.261	Cricetulus_griseus_chok1gshd
ENSNLEG00000001207	-	100	89.352	ENSCGRG00000016441	Polr2e	100	89.352	Cricetulus_griseus_crigri
ENSNLEG00000001207	-	100	90.995	ENSCSEG00000007107	polr2eb	100	89.674	Cynoglossus_semilaevis
ENSNLEG00000001207	-	100	91.943	ENSCVAG00000019940	polr2eb	100	91.943	Cyprinodon_variegatus
ENSNLEG00000001207	-	100	90.995	ENSDARG00000026183	polr2eb	100	90.995	Danio_rerio
ENSNLEG00000001207	-	91	95.812	ENSDNOG00000044994	POLR2E	84	95.812	Dasypus_novemcinctus
ENSNLEG00000001207	-	100	96.209	ENSDORG00000001154	Polr2e	100	96.209	Dipodomys_ordii
ENSNLEG00000001207	-	99	82.381	FBgn0033571	Rpb5	99	82.381	Drosophila_melanogaster
ENSNLEG00000001207	-	75	86.709	ENSEBUG00000010159	-	76	86.709	Eptatretus_burgeri
ENSNLEG00000001207	-	69	88.356	ENSEASG00005021615	POLR2E	67	82.822	Equus_asinus_asinus
ENSNLEG00000001207	-	100	95.652	ENSECAG00000011124	POLR2E	100	95.652	Equus_caballus
ENSNLEG00000001207	-	100	90.047	ENSELUG00000020646	polr2e	100	90.047	Esox_lucius
ENSNLEG00000001207	-	100	90.995	ENSELUG00000005815	POLR2E	100	90.995	Esox_lucius
ENSNLEG00000001207	-	100	95.735	ENSFCAG00000007318	POLR2E	100	95.735	Felis_catus
ENSNLEG00000001207	-	91	95.337	ENSFALG00000013986	POLR2E	99	95.337	Ficedula_albicollis
ENSNLEG00000001207	-	100	96.209	ENSFDAG00000014539	POLR2E	100	96.209	Fukomys_damarensis
ENSNLEG00000001207	-	100	91.943	ENSFHEG00000022398	polr2eb	100	91.943	Fundulus_heteroclitus
ENSNLEG00000001207	-	100	90.521	ENSGMOG00000007615	polr2eb	100	90.521	Gadus_morhua
ENSNLEG00000001207	-	100	95.735	ENSGALG00000002591	POLR2E	100	95.735	Gallus_gallus
ENSNLEG00000001207	-	100	92.417	ENSGAFG00000005087	polr2eb	100	92.417	Gambusia_affinis
ENSNLEG00000001207	-	100	90.521	ENSGACG00000013247	polr2eb	100	90.521	Gasterosteus_aculeatus
ENSNLEG00000001207	-	100	95.735	ENSGAGG00000008356	POLR2E	100	95.735	Gopherus_agassizii
ENSNLEG00000001207	-	100	96.209	ENSGGOG00000011267	POLR2E	100	96.209	Gorilla_gorilla
ENSNLEG00000001207	-	68	84.615	ENSHBUG00000011099	polr2eb	100	84.615	Haplochromis_burtoni
ENSNLEG00000001207	-	100	95.261	ENSHGLG00000013330	POLR2E	100	95.261	Heterocephalus_glaber_female
ENSNLEG00000001207	-	100	95.261	ENSHGLG00100011014	POLR2E	100	95.261	Heterocephalus_glaber_male
ENSNLEG00000001207	-	100	90.521	ENSHCOG00000000906	polr2eb	100	90.521	Hippocampus_comes
ENSNLEG00000001207	-	54	85.841	ENSHCOG00000012099	-	88	85.841	Hippocampus_comes
ENSNLEG00000001207	-	100	91.943	ENSIPUG00000019801	polr2e	100	91.943	Ictalurus_punctatus
ENSNLEG00000001207	-	100	96.209	ENSSTOG00000002853	POLR2E	100	96.209	Ictidomys_tridecemlineatus
ENSNLEG00000001207	-	100	88.043	ENSJJAG00000003145	-	100	88.043	Jaculus_jaculus
ENSNLEG00000001207	-	77	79.630	ENSJJAG00000015812	-	100	79.630	Jaculus_jaculus
ENSNLEG00000001207	-	100	95.261	ENSJJAG00000016595	-	100	95.261	Jaculus_jaculus
ENSNLEG00000001207	-	100	91.943	ENSKMAG00000005954	polr2eb	100	91.943	Kryptolebias_marmoratus
ENSNLEG00000001207	-	100	91.943	ENSLBEG00000024802	polr2eb	100	91.943	Labrus_bergylta
ENSNLEG00000001207	-	100	91.943	ENSLACG00000013686	POLR2E	100	91.943	Latimeria_chalumnae
ENSNLEG00000001207	-	77	92.025	ENSLOCG00000004599	POLR2E	100	92.025	Lepisosteus_oculatus
ENSNLEG00000001207	-	100	76.526	ENSLAFG00000025587	POLR2E	100	76.526	Loxodonta_africana
ENSNLEG00000001207	-	100	96.209	ENSMFAG00000002884	POLR2E	100	96.209	Macaca_fascicularis
ENSNLEG00000001207	-	100	96.209	ENSMMUG00000013927	POLR2E	100	96.209	Macaca_mulatta
ENSNLEG00000001207	-	100	96.209	ENSMNEG00000034046	-	100	96.209	Macaca_nemestrina
ENSNLEG00000001207	-	100	62.736	ENSMNEG00000033452	-	100	62.736	Macaca_nemestrina
ENSNLEG00000001207	-	92	80.412	ENSMLEG00000012405	POLR2E	94	80.412	Mandrillus_leucophaeus
ENSNLEG00000001207	-	100	91.943	ENSMAMG00000018703	polr2eb	100	91.943	Mastacembelus_armatus
ENSNLEG00000001207	-	100	91.304	ENSMZEG00005010796	polr2eb	100	91.304	Maylandia_zebra
ENSNLEG00000001207	-	100	94.340	ENSMGAG00000003769	POLR2E	100	94.340	Meleagris_gallopavo
ENSNLEG00000001207	-	92	94.330	ENSMAUG00000010125	-	100	94.792	Mesocricetus_auratus
ENSNLEG00000001207	-	100	64.455	ENSMAUG00000011003	-	100	64.455	Mesocricetus_auratus
ENSNLEG00000001207	-	100	96.209	ENSMICG00000013063	POLR2E	100	96.209	Microcebus_murinus
ENSNLEG00000001207	-	100	95.261	ENSMOCG00000013414	Polr2e	100	95.261	Microtus_ochrogaster
ENSNLEG00000001207	-	91	82.383	ENSMMOG00000001167	polr2eb	88	82.383	Mola_mola
ENSNLEG00000001207	-	100	89.130	ENSMMOG00000001161	polr2eb	100	89.130	Mola_mola
ENSNLEG00000001207	-	100	95.735	ENSMODG00000005494	POLR2E	100	95.735	Monodelphis_domestica
ENSNLEG00000001207	-	100	92.417	ENSMALG00000021888	polr2eb	100	92.417	Monopterus_albus
ENSNLEG00000001207	-	100	95.261	MGP_CAROLIEiJ_G0015561	Polr2e	100	95.261	Mus_caroli
ENSNLEG00000001207	-	100	95.261	ENSMUSG00000004667	Polr2e	100	95.261	Mus_musculus
ENSNLEG00000001207	-	100	95.261	MGP_PahariEiJ_G0030974	Polr2e	100	95.261	Mus_pahari
ENSNLEG00000001207	-	100	95.261	MGP_SPRETEiJ_G0016379	Polr2e	100	95.261	Mus_spretus
ENSNLEG00000001207	-	100	95.261	ENSMPUG00000008953	POLR2E	100	95.261	Mustela_putorius_furo
ENSNLEG00000001207	-	66	89.209	ENSMLUG00000006376	-	93	83.444	Myotis_lucifugus
ENSNLEG00000001207	-	100	96.209	ENSMLUG00000013193	POLR2E	100	96.209	Myotis_lucifugus
ENSNLEG00000001207	-	100	95.261	ENSNGAG00000001147	Polr2e	100	95.261	Nannospalax_galili
ENSNLEG00000001207	-	85	70.000	ENSNGAG00000017344	-	96	70.000	Nannospalax_galili
ENSNLEG00000001207	-	100	91.304	ENSNBRG00000022772	polr2eb	100	91.304	Neolamprologus_brichardi
ENSNLEG00000001207	-	100	86.256	ENSOPRG00000008331	POLR2E	100	86.256	Ochotona_princeps
ENSNLEG00000001207	-	89	85.027	ENSODEG00000007985	-	100	85.027	Octodon_degus
ENSNLEG00000001207	-	100	96.209	ENSODEG00000013230	-	100	96.209	Octodon_degus
ENSNLEG00000001207	-	100	70.833	ENSODEG00000011490	-	100	70.833	Octodon_degus
ENSNLEG00000001207	-	100	91.943	ENSONIG00000002519	polr2eb	100	91.943	Oreochromis_niloticus
ENSNLEG00000001207	-	100	92.417	ENSORLG00000015346	polr2eb	100	92.417	Oryzias_latipes
ENSNLEG00000001207	-	100	92.417	ENSORLG00020020700	polr2e	100	92.417	Oryzias_latipes_hni
ENSNLEG00000001207	-	100	92.417	ENSORLG00015016842	polr2e	100	92.417	Oryzias_latipes_hsok
ENSNLEG00000001207	-	100	91.943	ENSOMEG00000002709	polr2eb	100	91.943	Oryzias_melastigma
ENSNLEG00000001207	-	100	96.209	ENSOGAG00000012311	POLR2E	100	96.209	Otolemur_garnettii
ENSNLEG00000001207	-	100	96.209	ENSOARG00000010994	POLR2E	100	96.209	Ovis_aries
ENSNLEG00000001207	-	91	95.833	ENSPPAG00000003145	POLR2E	100	95.833	Pan_paniscus
ENSNLEG00000001207	-	100	95.735	ENSPPRG00000000777	POLR2E	100	95.735	Panthera_pardus
ENSNLEG00000001207	-	90	85.542	ENSPTIG00000012237	POLR2E	98	88.889	Panthera_tigris_altaica
ENSNLEG00000001207	-	100	96.209	ENSPTRG00000010183	POLR2E	100	96.209	Pan_troglodytes
ENSNLEG00000001207	-	100	96.209	ENSPANG00000018011	POLR2E	100	96.209	Papio_anubis
ENSNLEG00000001207	-	100	90.995	ENSPKIG00000009607	POLR2E	100	90.995	Paramormyrops_kingsleyae
ENSNLEG00000001207	-	100	91.469	ENSPKIG00000024123	POLR2E	100	91.469	Paramormyrops_kingsleyae
ENSNLEG00000001207	-	98	91.748	ENSPSIG00000002870	POLR2E	99	91.748	Pelodiscus_sinensis
ENSNLEG00000001207	-	100	90.761	ENSPMGG00000014354	polr2eb	100	90.761	Periophthalmus_magnuspinnatus
ENSNLEG00000001207	-	100	95.261	ENSPEMG00000023261	Polr2e	100	95.261	Peromyscus_maniculatus_bairdii
ENSNLEG00000001207	-	90	95.263	ENSPCIG00000007312	POLR2E	75	95.263	Phascolarctos_cinereus
ENSNLEG00000001207	-	100	92.417	ENSPFOG00000005734	polr2eb	100	92.417	Poecilia_formosa
ENSNLEG00000001207	-	100	92.417	ENSPLAG00000014496	polr2eb	100	92.417	Poecilia_latipinna
ENSNLEG00000001207	-	100	92.417	ENSPMEG00000008053	polr2eb	100	92.417	Poecilia_mexicana
ENSNLEG00000001207	-	100	92.417	ENSPREG00000006489	polr2eb	100	92.417	Poecilia_reticulata
ENSNLEG00000001207	-	100	89.151	ENSPPYG00000009305	POLR2E	100	89.151	Pongo_abelii
ENSNLEG00000001207	-	53	92.857	ENSPCAG00000016605	POLR2E	100	92.857	Procavia_capensis
ENSNLEG00000001207	-	100	96.209	ENSPCOG00000014491	POLR2E	100	96.209	Propithecus_coquereli
ENSNLEG00000001207	-	74	100.000	ENSPVAG00000007718	-	55	94.783	Pteropus_vampyrus
ENSNLEG00000001207	-	91	91.623	ENSPNYG00000019797	polr2eb	96	91.623	Pundamilia_nyererei
ENSNLEG00000001207	-	100	91.943	ENSPNAG00000026263	POLR2E	100	91.943	Pygocentrus_nattereri
ENSNLEG00000001207	-	100	95.261	ENSRNOG00000013545	Polr2e	100	95.261	Rattus_norvegicus
ENSNLEG00000001207	-	100	70.283	ENSRBIG00000027259	-	100	70.283	Rhinopithecus_bieti
ENSNLEG00000001207	-	100	96.209	ENSRBIG00000028726	-	100	96.209	Rhinopithecus_bieti
ENSNLEG00000001207	-	100	96.209	ENSRROG00000043763	POLR2E	100	96.209	Rhinopithecus_roxellana
ENSNLEG00000001207	-	99	42.466	YBR154C	RPB5	98	42.466	Saccharomyces_cerevisiae
ENSNLEG00000001207	-	100	96.209	ENSSBOG00000027241	POLR2E	100	96.209	Saimiri_boliviensis_boliviensis
ENSNLEG00000001207	-	100	95.735	ENSSHAG00000010690	POLR2E	100	95.735	Sarcophilus_harrisii
ENSNLEG00000001207	-	100	91.943	ENSSFOG00015006073	polr2e	100	91.943	Scleropages_formosus
ENSNLEG00000001207	-	100	91.943	ENSSMAG00000012782	polr2eb	100	91.943	Scophthalmus_maximus
ENSNLEG00000001207	-	100	91.943	ENSSDUG00000003352	polr2eb	100	91.943	Seriola_dumerili
ENSNLEG00000001207	-	100	91.943	ENSSLDG00000004965	polr2eb	100	91.943	Seriola_lalandi_dorsalis
ENSNLEG00000001207	-	100	94.313	ENSSPUG00000006114	POLR2E	100	94.313	Sphenodon_punctatus
ENSNLEG00000001207	-	100	91.943	ENSSPAG00000017556	polr2eb	100	91.943	Stegastes_partitus
ENSNLEG00000001207	-	100	96.209	ENSSSCG00000021472	POLR2E	100	96.209	Sus_scrofa
ENSNLEG00000001207	-	63	93.913	ENSTGUG00000000922	POLR2E	99	84.286	Taeniopygia_guttata
ENSNLEG00000001207	-	100	90.761	ENSTRUG00000018238	polr2eb	100	90.761	Takifugu_rubripes
ENSNLEG00000001207	-	100	91.943	ENSTNIG00000013187	polr2eb	100	91.943	Tetraodon_nigroviridis
ENSNLEG00000001207	-	100	95.735	ENSTTRG00000001484	POLR2E	100	95.735	Tursiops_truncatus
ENSNLEG00000001207	-	100	95.109	ENSUAMG00000009166	POLR2E	100	95.109	Ursus_americanus
ENSNLEG00000001207	-	100	96.209	ENSVVUG00000022818	POLR2E	54	96.209	Vulpes_vulpes
ENSNLEG00000001207	-	100	93.839	ENSXETG00000003291	polr2e	100	93.839	Xenopus_tropicalis
ENSNLEG00000001207	-	100	91.304	ENSXCOG00000009197	polr2eb	100	91.304	Xiphophorus_couchianus
ENSNLEG00000001207	-	100	92.417	ENSXMAG00000026495	polr2eb	100	92.417	Xiphophorus_maculatus