EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001294 (Gene tree)
Gene ID: 100588134
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 75514 bases
Position: chr5:65266234-65341747
Accession: 100588134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000001565	RRM_1	PF00076.22	3.8e-32	1	2
ENSNLEP00000001565	RRM_1	PF00076.22	3.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000001655	PSPC1-201	1569	XM_012506752	ENSNLEP00000001565	522 (aa)	XP_012362206	G1QKW3

Gene Model

Click here to download ENSNLEG00000001294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001294	PSPC1	73	55.897	ENSNLEG00000035521	-	80	67.832
ENSNLEG00000001294	PSPC1	91	57.474	ENSNLEG00000001278	NONO	85	68.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001294	PSPC1	100	99.426	ENSG00000121390	PSPC1	100	99.426	Homo_sapiens
ENSNLEG00000001294	PSPC1	88	70.440	ENSAPOG00000015946	pspc1	79	73.721	Acanthochromis_polyacanthus
ENSNLEG00000001294	PSPC1	100	98.470	ENSAMEG00000017420	PSPC1	100	98.470	Ailuropoda_melanoleuca
ENSNLEG00000001294	PSPC1	88	62.208	ENSACIG00000018695	pspc1	87	59.660	Amphilophus_citrinellus
ENSNLEG00000001294	PSPC1	88	69.937	ENSAOCG00000005279	pspc1	78	73.256	Amphiprion_ocellaris
ENSNLEG00000001294	PSPC1	88	71.064	ENSAPEG00000015927	pspc1	79	73.256	Amphiprion_percula
ENSNLEG00000001294	PSPC1	88	58.386	ENSATEG00000004878	pspc1	76	61.928	Anabas_testudineus
ENSNLEG00000001294	PSPC1	89	60.730	ENSAPLG00000003643	SFPQ	69	69.126	Anas_platyrhynchos
ENSNLEG00000001294	PSPC1	77	93.812	ENSAPLG00000006246	PSPC1	100	93.812	Anas_platyrhynchos
ENSNLEG00000001294	PSPC1	90	52.500	ENSACAG00000013307	-	56	64.917	Anolis_carolinensis
ENSNLEG00000001294	PSPC1	89	91.631	ENSACAG00000002093	PSPC1	88	91.845	Anolis_carolinensis
ENSNLEG00000001294	PSPC1	100	98.662	ENSANAG00000000059	PSPC1	100	98.662	Aotus_nancymaae
ENSNLEG00000001294	PSPC1	88	62.313	ENSACLG00000027220	pspc1	87	58.887	Astatotilapia_calliptera
ENSNLEG00000001294	PSPC1	88	68.542	ENSAMXG00000036881	pspc1	80	73.103	Astyanax_mexicanus
ENSNLEG00000001294	PSPC1	100	96.000	ENSBTAG00000003934	PSPC1	100	96.000	Bos_taurus
ENSNLEG00000001294	PSPC1	100	98.662	ENSCJAG00000004554	PSPC1	100	98.662	Callithrix_jacchus
ENSNLEG00000001294	PSPC1	100	98.662	ENSCAFG00020002009	PSPC1	100	98.662	Canis_lupus_dingo
ENSNLEG00000001294	PSPC1	100	96.000	ENSCHIG00000016708	PSPC1	100	96.000	Capra_hircus
ENSNLEG00000001294	PSPC1	80	88.389	ENSTSYG00000032882	PSPC1	93	85.748	Carlito_syrichta
ENSNLEG00000001294	PSPC1	100	96.750	ENSCPOG00000000395	PSPC1	100	96.750	Cavia_porcellus
ENSNLEG00000001294	PSPC1	100	98.662	ENSCCAG00000033498	PSPC1	100	98.662	Cebus_capucinus
ENSNLEG00000001294	PSPC1	100	99.044	ENSCATG00000036434	PSPC1	100	99.044	Cercocebus_atys
ENSNLEG00000001294	PSPC1	88	88.121	ENSCLAG00000005241	PSPC1	99	88.121	Chinchilla_lanigera
ENSNLEG00000001294	PSPC1	100	91.587	ENSCHOG00000008913	PSPC1	100	91.396	Choloepus_hoffmanni
ENSNLEG00000001294	PSPC1	89	94.218	ENSCPBG00000020859	PSPC1	89	94.218	Chrysemys_picta_bellii
ENSNLEG00000001294	PSPC1	59	58.766	ENSCSAVG00000003533	-	53	61.786	Ciona_savignyi
ENSNLEG00000001294	PSPC1	78	86.173	ENSCANG00000018948	PSPC1	87	100.000	Colobus_angolensis_palliatus
ENSNLEG00000001294	PSPC1	100	97.132	ENSCGRG00001018368	Pspc1	100	97.132	Cricetulus_griseus_chok1gshd
ENSNLEG00000001294	PSPC1	100	97.132	ENSCGRG00000011724	Pspc1	100	97.132	Cricetulus_griseus_crigri
ENSNLEG00000001294	PSPC1	87	66.523	ENSCVAG00000007679	-	78	68.483	Cyprinodon_variegatus
ENSNLEG00000001294	PSPC1	99	66.417	ENSDARG00000006621	pspc1	100	67.633	Danio_rerio
ENSNLEG00000001294	PSPC1	100	96.941	ENSDNOG00000011078	PSPC1	100	96.941	Dasypus_novemcinctus
ENSNLEG00000001294	PSPC1	100	94.264	ENSDORG00000016050	Pspc1	100	94.264	Dipodomys_ordii
ENSNLEG00000001294	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSNLEG00000001294	PSPC1	60	45.238	ENSEBUG00000010133	pspc1	72	51.273	Eptatretus_burgeri
ENSNLEG00000001294	PSPC1	88	59.298	ENSEBUG00000003964	-	62	72.254	Eptatretus_burgeri
ENSNLEG00000001294	PSPC1	100	97.897	ENSEASG00005000119	PSPC1	100	97.897	Equus_asinus_asinus
ENSNLEG00000001294	PSPC1	100	97.897	ENSECAG00000017286	PSPC1	100	97.897	Equus_caballus
ENSNLEG00000001294	PSPC1	88	81.056	ENSEEUG00000011288	-	100	64.627	Erinaceus_europaeus
ENSNLEG00000001294	PSPC1	89	71.488	ENSELUG00000003746	pspc1	78	81.651	Esox_lucius
ENSNLEG00000001294	PSPC1	100	98.662	ENSFCAG00000027841	PSPC1	100	98.662	Felis_catus
ENSNLEG00000001294	PSPC1	89	94.647	ENSFALG00000008750	PSPC1	88	94.647	Ficedula_albicollis
ENSNLEG00000001294	PSPC1	100	94.646	ENSFDAG00000002617	PSPC1	100	94.646	Fukomys_damarensis
ENSNLEG00000001294	PSPC1	88	66.738	ENSGMOG00000015074	pspc1	86	65.875	Gadus_morhua
ENSNLEG00000001294	PSPC1	94	91.650	ENSGALG00000017142	PSPC1	89	94.647	Gallus_gallus
ENSNLEG00000001294	PSPC1	62	78.154	ENSGAFG00000006327	pspc1	67	78.154	Gambusia_affinis
ENSNLEG00000001294	PSPC1	88	65.948	ENSGACG00000014901	pspc1	92	73.414	Gasterosteus_aculeatus
ENSNLEG00000001294	PSPC1	89	94.218	ENSGAGG00000019164	PSPC1	89	94.218	Gopherus_agassizii
ENSNLEG00000001294	PSPC1	89	60.300	ENSGAGG00000017325	-	56	68.306	Gopherus_agassizii
ENSNLEG00000001294	PSPC1	100	99.235	ENSGGOG00000003414	PSPC1	100	99.235	Gorilla_gorilla
ENSNLEG00000001294	PSPC1	100	64.444	ENSHBUG00000001139	pspc1	87	69.742	Haplochromis_burtoni
ENSNLEG00000001294	PSPC1	100	96.750	ENSHGLG00000018811	PSPC1	100	96.750	Heterocephalus_glaber_female
ENSNLEG00000001294	PSPC1	67	92.286	ENSHGLG00100007962	PSPC1	100	92.286	Heterocephalus_glaber_male
ENSNLEG00000001294	PSPC1	73	71.018	ENSHCOG00000013251	pspc1	83	70.321	Hippocampus_comes
ENSNLEG00000001294	PSPC1	92	72.098	ENSIPUG00000013192	pspc1	88	73.673	Ictalurus_punctatus
ENSNLEG00000001294	PSPC1	100	97.897	ENSSTOG00000026833	PSPC1	100	97.897	Ictidomys_tridecemlineatus
ENSNLEG00000001294	PSPC1	100	97.514	ENSJJAG00000018334	Pspc1	100	97.514	Jaculus_jaculus
ENSNLEG00000001294	PSPC1	88	55.724	ENSKMAG00000013525	-	84	53.978	Kryptolebias_marmoratus
ENSNLEG00000001294	PSPC1	96	64.559	ENSLBEG00000004474	pspc1	73	74.716	Labrus_bergylta
ENSNLEG00000001294	PSPC1	88	85.590	ENSLACG00000010762	PSPC1	88	85.129	Latimeria_chalumnae
ENSNLEG00000001294	PSPC1	88	84.382	ENSLOCG00000010832	pspc1	91	84.382	Lepisosteus_oculatus
ENSNLEG00000001294	PSPC1	100	96.941	ENSLAFG00000010968	PSPC1	100	96.941	Loxodonta_africana
ENSNLEG00000001294	PSPC1	100	99.044	ENSMFAG00000032728	PSPC1	100	99.044	Macaca_fascicularis
ENSNLEG00000001294	PSPC1	100	99.044	ENSMMUG00000020262	PSPC1	100	99.044	Macaca_mulatta
ENSNLEG00000001294	PSPC1	100	99.044	ENSMNEG00000027401	PSPC1	100	99.044	Macaca_nemestrina
ENSNLEG00000001294	PSPC1	76	99.749	ENSMLEG00000039043	PSPC1	94	99.749	Mandrillus_leucophaeus
ENSNLEG00000001294	PSPC1	88	67.629	ENSMAMG00000004333	pspc1	77	71.628	Mastacembelus_armatus
ENSNLEG00000001294	PSPC1	88	62.313	ENSMZEG00005005726	pspc1	87	58.887	Maylandia_zebra
ENSNLEG00000001294	PSPC1	78	93.596	ENSMGAG00000015134	PSPC1	100	93.596	Meleagris_gallopavo
ENSNLEG00000001294	PSPC1	88	91.558	ENSMAUG00000021067	Pspc1	99	90.909	Mesocricetus_auratus
ENSNLEG00000001294	PSPC1	100	98.279	ENSMICG00000013970	PSPC1	100	98.279	Microcebus_murinus
ENSNLEG00000001294	PSPC1	100	97.323	ENSMOCG00000006060	Pspc1	100	97.323	Microtus_ochrogaster
ENSNLEG00000001294	PSPC1	93	43.130	ENSMMOG00000004352	pspc1	58	52.923	Mola_mola
ENSNLEG00000001294	PSPC1	93	96.495	ENSMODG00000008029	PSPC1	78	96.495	Monodelphis_domestica
ENSNLEG00000001294	PSPC1	91	67.347	ENSMALG00000008914	pspc1	88	67.591	Monopterus_albus
ENSNLEG00000001294	PSPC1	100	97.328	MGP_CAROLIEiJ_G0019341	Pspc1	100	97.328	Mus_caroli
ENSNLEG00000001294	PSPC1	100	97.519	ENSMUSG00000021938	Pspc1	100	97.519	Mus_musculus
ENSNLEG00000001294	PSPC1	100	97.328	MGP_PahariEiJ_G0030359	Pspc1	100	97.328	Mus_pahari
ENSNLEG00000001294	PSPC1	100	97.328	MGP_SPRETEiJ_G0020232	Pspc1	100	97.328	Mus_spretus
ENSNLEG00000001294	PSPC1	100	98.279	ENSMPUG00000013347	PSPC1	100	98.279	Mustela_putorius_furo
ENSNLEG00000001294	PSPC1	100	96.198	ENSMLUG00000017663	PSPC1	100	96.198	Myotis_lucifugus
ENSNLEG00000001294	PSPC1	100	97.323	ENSNGAG00000011271	Pspc1	100	97.323	Nannospalax_galili
ENSNLEG00000001294	PSPC1	74	64.090	ENSNBRG00000014059	pspc1	76	69.207	Neolamprologus_brichardi
ENSNLEG00000001294	PSPC1	100	76.099	ENSMEUG00000000476	PSPC1	100	76.099	Notamacropus_eugenii
ENSNLEG00000001294	PSPC1	100	85.851	ENSODEG00000007817	-	100	80.340	Octodon_degus
ENSNLEG00000001294	PSPC1	100	84.924	ENSODEG00000019012	-	100	84.877	Octodon_degus
ENSNLEG00000001294	PSPC1	100	64.444	ENSONIG00000012010	pspc1	87	68.856	Oreochromis_niloticus
ENSNLEG00000001294	PSPC1	76	97.744	ENSOANG00000009017	-	100	97.744	Ornithorhynchus_anatinus
ENSNLEG00000001294	PSPC1	99	66.221	ENSOANG00000011381	-	92	68.750	Ornithorhynchus_anatinus
ENSNLEG00000001294	PSPC1	100	98.088	ENSOCUG00000006153	PSPC1	100	98.088	Oryctolagus_cuniculus
ENSNLEG00000001294	PSPC1	88	70.213	ENSORLG00000004232	-	87	64.182	Oryzias_latipes
ENSNLEG00000001294	PSPC1	88	69.787	ENSORLG00020000578	PSPC1	87	65.409	Oryzias_latipes_hni
ENSNLEG00000001294	PSPC1	88	70.638	ENSORLG00015017480	pspc1	82	68.650	Oryzias_latipes_hsok
ENSNLEG00000001294	PSPC1	100	98.853	ENSOGAG00000012643	PSPC1	100	98.853	Otolemur_garnettii
ENSNLEG00000001294	PSPC1	100	91.048	ENSOARG00000014163	PSPC1	100	91.048	Ovis_aries
ENSNLEG00000001294	PSPC1	89	93.118	ENSPPAG00000009836	PSPC1	93	99.695	Pan_paniscus
ENSNLEG00000001294	PSPC1	100	98.662	ENSPPRG00000008833	PSPC1	100	98.662	Panthera_pardus
ENSNLEG00000001294	PSPC1	100	83.365	ENSPTIG00000016917	PSPC1	100	83.365	Panthera_tigris_altaica
ENSNLEG00000001294	PSPC1	98	97.860	ENSPTRG00000005677	PSPC1	99	99.383	Pan_troglodytes
ENSNLEG00000001294	PSPC1	100	99.235	ENSPANG00000001992	PSPC1	100	99.235	Papio_anubis
ENSNLEG00000001294	PSPC1	82	78.555	ENSPKIG00000003578	pspc1	81	77.880	Paramormyrops_kingsleyae
ENSNLEG00000001294	PSPC1	99	86.492	ENSPSIG00000005168	PSPC1	89	94.004	Pelodiscus_sinensis
ENSNLEG00000001294	PSPC1	59	70.159	ENSPMGG00000015135	pspc1	80	73.611	Periophthalmus_magnuspinnatus
ENSNLEG00000001294	PSPC1	100	97.706	ENSPEMG00000015214	Pspc1	100	97.706	Peromyscus_maniculatus_bairdii
ENSNLEG00000001294	PSPC1	99	96.935	ENSPCIG00000017680	PSPC1	100	96.935	Phascolarctos_cinereus
ENSNLEG00000001294	PSPC1	93	66.799	ENSPFOG00000003362	pspc1	88	68.076	Poecilia_formosa
ENSNLEG00000001294	PSPC1	69	64.658	ENSPLAG00000004407	-	52	60.647	Poecilia_latipinna
ENSNLEG00000001294	PSPC1	93	66.799	ENSPLAG00000011540	pspc1	87	68.076	Poecilia_latipinna
ENSNLEG00000001294	PSPC1	93	66.402	ENSPMEG00000008322	pspc1	87	67.653	Poecilia_mexicana
ENSNLEG00000001294	PSPC1	68	65.278	ENSPMEG00000001025	-	51	60.647	Poecilia_mexicana
ENSNLEG00000001294	PSPC1	93	66.402	ENSPREG00000007786	pspc1	87	67.653	Poecilia_reticulata
ENSNLEG00000001294	PSPC1	100	98.853	ENSPPYG00000005186	PSPC1	100	98.853	Pongo_abelii
ENSNLEG00000001294	PSPC1	66	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSNLEG00000001294	PSPC1	100	94.264	ENSPCOG00000014364	PSPC1	100	94.264	Propithecus_coquereli
ENSNLEG00000001294	PSPC1	100	93.308	ENSPVAG00000005036	PSPC1	100	93.117	Pteropus_vampyrus
ENSNLEG00000001294	PSPC1	100	57.380	ENSPNYG00000008893	pspc1	87	58.887	Pundamilia_nyererei
ENSNLEG00000001294	PSPC1	88	72.824	ENSPNAG00000016511	pspc1	89	72.611	Pygocentrus_nattereri
ENSNLEG00000001294	PSPC1	100	97.514	ENSRNOG00000020782	Pspc1	100	97.514	Rattus_norvegicus
ENSNLEG00000001294	PSPC1	93	99.384	ENSRBIG00000036057	PSPC1	100	99.384	Rhinopithecus_bieti
ENSNLEG00000001294	PSPC1	100	99.235	ENSRROG00000036334	PSPC1	100	99.235	Rhinopithecus_roxellana
ENSNLEG00000001294	PSPC1	79	89.104	ENSSBOG00000028172	PSPC1	90	95.290	Saimiri_boliviensis_boliviensis
ENSNLEG00000001294	PSPC1	100	91.619	ENSSHAG00000004696	PSPC1	100	91.619	Sarcophilus_harrisii
ENSNLEG00000001294	PSPC1	82	79.391	ENSSFOG00015001395	pspc1	90	78.372	Scleropages_formosus
ENSNLEG00000001294	PSPC1	88	67.155	ENSSMAG00000001761	pspc1	82	76.970	Scophthalmus_maximus
ENSNLEG00000001294	PSPC1	88	69.168	ENSSDUG00000010651	pspc1	76	74.186	Seriola_dumerili
ENSNLEG00000001294	PSPC1	88	64.719	ENSSLDG00000004284	pspc1	81	62.037	Seriola_lalandi_dorsalis
ENSNLEG00000001294	PSPC1	100	88.910	ENSSARG00000000888	PSPC1	100	88.719	Sorex_araneus
ENSNLEG00000001294	PSPC1	89	54.025	ENSSPUG00000001136	-	53	61.453	Sphenodon_punctatus
ENSNLEG00000001294	PSPC1	99	74.953	ENSSPUG00000008550	PSPC1	89	81.064	Sphenodon_punctatus
ENSNLEG00000001294	PSPC1	88	69.072	ENSSPAG00000001921	pspc1	77	72.791	Stegastes_partitus
ENSNLEG00000001294	PSPC1	100	96.756	ENSSSCG00000009569	PSPC1	100	96.756	Sus_scrofa
ENSNLEG00000001294	PSPC1	89	94.647	ENSTGUG00000011295	PSPC1	100	94.647	Taeniopygia_guttata
ENSNLEG00000001294	PSPC1	95	59.922	ENSTRUG00000011335	pspc1	77	65.937	Takifugu_rubripes
ENSNLEG00000001294	PSPC1	88	65.236	ENSTNIG00000010358	pspc1	84	66.508	Tetraodon_nigroviridis
ENSNLEG00000001294	PSPC1	100	77.672	ENSTBEG00000002361	PSPC1	100	75.717	Tupaia_belangeri
ENSNLEG00000001294	PSPC1	100	96.947	ENSTTRG00000003343	PSPC1	100	96.947	Tursiops_truncatus
ENSNLEG00000001294	PSPC1	67	98.291	ENSUAMG00000012309	PSPC1	100	98.291	Ursus_americanus
ENSNLEG00000001294	PSPC1	93	98.768	ENSUMAG00000013993	PSPC1	100	98.768	Ursus_maritimus
ENSNLEG00000001294	PSPC1	76	99.499	ENSVPAG00000010029	PSPC1	100	99.499	Vicugna_pacos
ENSNLEG00000001294	PSPC1	100	98.662	ENSVVUG00000006414	PSPC1	100	98.705	Vulpes_vulpes
ENSNLEG00000001294	PSPC1	66	73.521	ENSXCOG00000017438	pspc1	77	76.994	Xiphophorus_couchianus
ENSNLEG00000001294	PSPC1	66	73.803	ENSXMAG00000007929	pspc1	77	77.301	Xiphophorus_maculatus