EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001376 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 3460 bases
Position: chr6:74376305-74379764
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000001621	LSM	PF01423.22	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000001715	SNRPN-201	717	-	ENSNLEP00000001621	238 (aa)	-	G1QL10

Gene Model

Click here to download ENSNLEG00000001376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001376	SNRPN	92	76.471	ENSNLEG00000029067	SNRPB	93	76.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001376	SNRPN	99	83.750	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSNLEG00000001376	SNRPN	100	82.573	ENSAMEG00000007034	SNRPN	99	82.573	Ailuropoda_melanoleuca
ENSNLEG00000001376	SNRPN	99	83.750	ENSANAG00000034241	SNRPN	100	83.750	Aotus_nancymaae
ENSNLEG00000001376	SNRPN	99	82.500	ENSBTAG00000008251	SNRPN	100	82.500	Bos_taurus
ENSNLEG00000001376	SNRPN	99	83.750	ENSCJAG00000003759	-	100	83.750	Callithrix_jacchus
ENSNLEG00000001376	SNRPN	95	82.456	ENSCJAG00000042622	-	95	82.456	Callithrix_jacchus
ENSNLEG00000001376	SNRPN	99	83.333	ENSCAFG00000010127	SNRPN	100	83.333	Canis_familiaris
ENSNLEG00000001376	SNRPN	99	83.333	ENSCAFG00020024075	SNRPN	100	83.333	Canis_lupus_dingo
ENSNLEG00000001376	SNRPN	99	82.500	ENSCHIG00000017477	SNRPN	100	82.500	Capra_hircus
ENSNLEG00000001376	SNRPN	99	83.750	ENSTSYG00000005248	SNRPN	100	83.750	Carlito_syrichta
ENSNLEG00000001376	SNRPN	100	82.988	ENSCAPG00000003047	SNRPN	100	83.750	Cavia_aperea
ENSNLEG00000001376	SNRPN	100	82.988	ENSCPOG00000020270	SNRPN	100	83.750	Cavia_porcellus
ENSNLEG00000001376	SNRPN	99	83.750	ENSCCAG00000024231	SNRPN	100	83.750	Cebus_capucinus
ENSNLEG00000001376	SNRPN	99	83.750	ENSCATG00000032518	SNRPN	100	83.750	Cercocebus_atys
ENSNLEG00000001376	SNRPN	99	83.750	ENSCLAG00000011376	SNRPN	100	83.750	Chinchilla_lanigera
ENSNLEG00000001376	SNRPN	99	83.750	ENSCSAG00000006406	SNRPN	100	83.750	Chlorocebus_sabaeus
ENSNLEG00000001376	SNRPN	97	82.051	ENSCHOG00000001846	SNRPN	88	82.051	Choloepus_hoffmanni
ENSNLEG00000001376	SNRPN	99	83.750	ENSCANG00000041156	SNRPN	100	83.750	Colobus_angolensis_palliatus
ENSNLEG00000001376	SNRPN	100	82.573	ENSCGRG00001004136	Snrpn	100	83.333	Cricetulus_griseus_chok1gshd
ENSNLEG00000001376	SNRPN	100	82.158	ENSCGRG00000001621	Snrpn	100	82.917	Cricetulus_griseus_crigri
ENSNLEG00000001376	SNRPN	81	66.327	ENSCVAG00000014193	SNRPN	88	70.698	Cyprinodon_variegatus
ENSNLEG00000001376	SNRPN	99	83.264	ENSDNOG00000037060	SNRPN	98	83.264	Dasypus_novemcinctus
ENSNLEG00000001376	SNRPN	99	83.333	ENSDORG00000004527	Snrpn	100	83.333	Dipodomys_ordii
ENSNLEG00000001376	SNRPN	99	83.333	ENSEASG00005017871	SNRPN	100	83.333	Equus_asinus_asinus
ENSNLEG00000001376	SNRPN	99	83.333	ENSECAG00000018148	SNRPN	100	83.333	Equus_caballus
ENSNLEG00000001376	SNRPN	99	82.427	ENSEEUG00000007440	-	100	82.427	Erinaceus_europaeus
ENSNLEG00000001376	SNRPN	99	83.333	ENSFCAG00000022298	-	100	83.333	Felis_catus
ENSNLEG00000001376	SNRPN	79	68.750	ENSFDAG00000010528	-	91	68.750	Fukomys_damarensis
ENSNLEG00000001376	SNRPN	99	83.333	ENSFDAG00000016578	-	100	83.333	Fukomys_damarensis
ENSNLEG00000001376	SNRPN	95	78.947	ENSGMOG00000018161	SNRPN	100	78.947	Gadus_morhua
ENSNLEG00000001376	SNRPN	89	57.674	ENSGGOG00000024469	-	69	59.124	Gorilla_gorilla
ENSNLEG00000001376	SNRPN	99	83.750	ENSGGOG00000003988	SNRPN	100	83.750	Gorilla_gorilla
ENSNLEG00000001376	SNRPN	99	69.583	ENSHGLG00000002327	-	88	67.136	Heterocephalus_glaber_female
ENSNLEG00000001376	SNRPN	92	66.972	ENSHGLG00000020936	-	91	66.514	Heterocephalus_glaber_female
ENSNLEG00000001376	SNRPN	99	83.750	ENSHGLG00000011924	SNRPN	100	83.750	Heterocephalus_glaber_female
ENSNLEG00000001376	SNRPN	88	73.709	ENSHGLG00000019812	-	89	74.178	Heterocephalus_glaber_female
ENSNLEG00000001376	SNRPN	88	73.709	ENSHGLG00100021056	-	89	74.178	Heterocephalus_glaber_male
ENSNLEG00000001376	SNRPN	99	83.750	ENSHGLG00100016559	SNRPN	100	83.750	Heterocephalus_glaber_male
ENSNLEG00000001376	SNRPN	99	66.250	ENSHGLG00100004881	-	88	65.258	Heterocephalus_glaber_male
ENSNLEG00000001376	SNRPN	99	83.750	ENSSTOG00000001339	SNRPN	100	83.750	Ictidomys_tridecemlineatus
ENSNLEG00000001376	SNRPN	99	83.264	ENSLAFG00000009458	SNRPN	99	83.264	Loxodonta_africana
ENSNLEG00000001376	SNRPN	99	83.750	ENSMFAG00000042235	SNRPN	100	83.750	Macaca_fascicularis
ENSNLEG00000001376	SNRPN	99	83.750	ENSMMUG00000023139	SNURF	100	83.750	Macaca_mulatta
ENSNLEG00000001376	SNRPN	99	83.750	ENSMNEG00000031291	SNRPN	100	83.750	Macaca_nemestrina
ENSNLEG00000001376	SNRPN	99	83.750	ENSMLEG00000038837	SNRPN	100	83.750	Mandrillus_leucophaeus
ENSNLEG00000001376	SNRPN	91	69.091	ENSMGAG00000008696	SNRPN	92	69.091	Meleagris_gallopavo
ENSNLEG00000001376	SNRPN	99	83.750	ENSMAUG00000000051	Snrpn	100	83.750	Mesocricetus_auratus
ENSNLEG00000001376	SNRPN	99	83.750	ENSMICG00000042356	SNRPN	100	83.750	Microcebus_murinus
ENSNLEG00000001376	SNRPN	99	83.750	ENSMOCG00000015350	Snrpn	100	83.750	Microtus_ochrogaster
ENSNLEG00000001376	SNRPN	92	77.376	ENSMODG00000013926	-	92	77.376	Monodelphis_domestica
ENSNLEG00000001376	SNRPN	99	83.750	MGP_CAROLIEiJ_G0029815	Snrpn	100	83.750	Mus_caroli
ENSNLEG00000001376	SNRPN	99	83.750	ENSMUSG00000102252	Snrpn	100	83.750	Mus_musculus
ENSNLEG00000001376	SNRPN	99	83.750	MGP_PahariEiJ_G0013040	Snrpn	100	83.750	Mus_pahari
ENSNLEG00000001376	SNRPN	99	83.750	MGP_SPRETEiJ_G0030918	Snrpn	100	83.750	Mus_spretus
ENSNLEG00000001376	SNRPN	99	83.333	ENSMPUG00000014638	-	100	83.333	Mustela_putorius_furo
ENSNLEG00000001376	SNRPN	99	82.845	ENSMLUG00000023361	-	98	82.845	Myotis_lucifugus
ENSNLEG00000001376	SNRPN	99	83.750	ENSNGAG00000000181	Snrpn	100	83.750	Nannospalax_galili
ENSNLEG00000001376	SNRPN	99	83.333	ENSODEG00000013478	-	100	83.333	Octodon_degus
ENSNLEG00000001376	SNRPN	99	79.583	ENSODEG00000019708	-	89	80.751	Octodon_degus
ENSNLEG00000001376	SNRPN	99	82.917	ENSODEG00000020110	-	100	82.917	Octodon_degus
ENSNLEG00000001376	SNRPN	79	92.857	ENSODEG00000016065	-	87	68.599	Octodon_degus
ENSNLEG00000001376	SNRPN	99	83.402	ENSOCUG00000003532	-	100	83.402	Oryctolagus_cuniculus
ENSNLEG00000001376	SNRPN	92	68.326	ENSORLG00020007490	SNRPN	92	73.094	Oryzias_latipes_hni
ENSNLEG00000001376	SNRPN	92	68.326	ENSORLG00015003332	SNRPN	92	73.094	Oryzias_latipes_hsok
ENSNLEG00000001376	SNRPN	92	68.778	ENSOMEG00000002066	SNRPN	92	73.543	Oryzias_melastigma
ENSNLEG00000001376	SNRPN	99	83.750	ENSOGAG00000007392	SNRPN	100	83.750	Otolemur_garnettii
ENSNLEG00000001376	SNRPN	99	82.500	ENSOARG00000009080	SNRPN	100	82.500	Ovis_aries
ENSNLEG00000001376	SNRPN	97	54.274	ENSPPAG00000034049	-	65	55.245	Pan_paniscus
ENSNLEG00000001376	SNRPN	99	83.750	ENSPPAG00000027650	SNRPN	100	83.750	Pan_paniscus
ENSNLEG00000001376	SNRPN	85	52.475	ENSPPRG00000006957	-	73	54.730	Panthera_pardus
ENSNLEG00000001376	SNRPN	99	83.333	ENSPPRG00000019878	-	100	83.333	Panthera_pardus
ENSNLEG00000001376	SNRPN	99	82.917	ENSPTIG00000004537	SNRPN	100	82.917	Panthera_tigris_altaica
ENSNLEG00000001376	SNRPN	99	83.750	ENSPTRG00000006826	SNRPN	100	83.750	Pan_troglodytes
ENSNLEG00000001376	SNRPN	97	54.701	ENSPTRG00000052400	-	65	55.944	Pan_troglodytes
ENSNLEG00000001376	SNRPN	99	83.750	ENSPANG00000020142	SNRPN	100	83.750	Papio_anubis
ENSNLEG00000001376	SNRPN	70	98.795	ENSPEMG00000013920	-	88	77.619	Peromyscus_maniculatus_bairdii
ENSNLEG00000001376	SNRPN	89	78.505	ENSPEMG00000020979	-	89	78.404	Peromyscus_maniculatus_bairdii
ENSNLEG00000001376	SNRPN	99	83.750	ENSPEMG00000012911	-	100	83.750	Peromyscus_maniculatus_bairdii
ENSNLEG00000001376	SNRPN	75	76.923	ENSPCIG00000004699	-	68	77.358	Phascolarctos_cinereus
ENSNLEG00000001376	SNRPN	71	71.676	ENSPMEG00000020674	SNRPN	92	73.543	Poecilia_mexicana
ENSNLEG00000001376	SNRPN	99	83.750	ENSPPYG00000006269	SNURF	100	83.750	Pongo_abelii
ENSNLEG00000001376	SNRPN	99	83.750	ENSPCOG00000014231	SNRPN	100	83.750	Propithecus_coquereli
ENSNLEG00000001376	SNRPN	99	83.750	ENSRNOG00000059764	Snrpn	100	83.750	Rattus_norvegicus
ENSNLEG00000001376	SNRPN	99	83.750	ENSRBIG00000041765	SNRPN	100	83.750	Rhinopithecus_bieti
ENSNLEG00000001376	SNRPN	99	83.750	ENSRROG00000035157	SNRPN	100	83.750	Rhinopithecus_roxellana
ENSNLEG00000001376	SNRPN	99	83.750	ENSSBOG00000000110	-	100	83.750	Saimiri_boliviensis_boliviensis
ENSNLEG00000001376	SNRPN	99	82.500	ENSSBOG00000024929	-	100	82.500	Saimiri_boliviensis_boliviensis
ENSNLEG00000001376	SNRPN	76	76.503	ENSSHAG00000010257	-	87	77.358	Sarcophilus_harrisii
ENSNLEG00000001376	SNRPN	79	100.000	ENSSARG00000000072	SNRPN	79	100.000	Sorex_araneus
ENSNLEG00000001376	SNRPN	99	82.917	ENSSSCG00000028124	SNRPN	100	82.917	Sus_scrofa
ENSNLEG00000001376	SNRPN	100	82.158	ENSTTRG00000010966	SNRPN	89	82.158	Tursiops_truncatus
ENSNLEG00000001376	SNRPN	92	82.063	ENSUAMG00000016284	SNRPN	78	82.063	Ursus_americanus
ENSNLEG00000001376	SNRPN	99	83.333	ENSUMAG00000025589	SNRPN	100	83.333	Ursus_maritimus
ENSNLEG00000001376	SNRPN	95	82.533	ENSVVUG00000017971	SNRPN	94	82.533	Vulpes_vulpes