EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001420 (Gene tree)
Gene ID: 100579219
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 13488 bases
Position: chr14:51600667-51614154
Accession: 100579219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000001680	zf-CCCH	PF00642.24	5e-18	1	1
ENSNLEP00000028571	zf-CCCH	PF00642.24	4.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000038974	CPSF4L-202	459	-	ENSNLEP00000028571	152 (aa)	-	A0A2I3GB86
ENSNLET00000001778	CPSF4L-201	643	XM_003279622	ENSNLEP00000001680	179 (aa)	XP_003279670	G1QL67

Gene Model

Click here to download ENSNLEG00000001420's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03015	mRNA surveillance pathway	KEGG
nle05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001420	CPSF4L	92	68.293	ENSNLEG00000011074	CPSF4	71	65.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001420	CPSF4L	100	99.441	ENSG00000187959	CPSF4L	100	99.441	Homo_sapiens
ENSNLEG00000001420	CPSF4L	99	81.461	ENSAMEG00000002707	CPSF4L	65	81.461	Ailuropoda_melanoleuca
ENSNLEG00000001420	CPSF4L	99	60.927	ENSANAG00000026558	-	100	60.927	Aotus_nancymaae
ENSNLEG00000001420	CPSF4L	91	76.074	ENSCJAG00000019911	CPSF4L	96	76.074	Callithrix_jacchus
ENSNLEG00000001420	CPSF4L	52	75.949	ENSCCAG00000030566	CPSF4L	66	75.949	Cebus_capucinus
ENSNLEG00000001420	CPSF4L	100	96.089	ENSCATG00000044555	CPSF4L	100	96.089	Cercocebus_atys
ENSNLEG00000001420	CPSF4L	100	95.000	ENSCSAG00000004429	CPSF4L	100	95.000	Chlorocebus_sabaeus
ENSNLEG00000001420	CPSF4L	100	96.089	ENSCANG00000035042	CPSF4L	100	96.089	Colobus_angolensis_palliatus
ENSNLEG00000001420	CPSF4L	99	74.157	ENSCGRG00001020079	Cpsf4l	99	74.157	Cricetulus_griseus_chok1gshd
ENSNLEG00000001420	CPSF4L	99	74.157	ENSCGRG00000010419	Cpsf4l	99	74.157	Cricetulus_griseus_crigri
ENSNLEG00000001420	CPSF4L	93	88.623	ENSDNOG00000014458	CPSF4L	87	88.623	Dasypus_novemcinctus
ENSNLEG00000001420	CPSF4L	93	90.361	ENSEASG00005018763	CPSF4L	100	90.361	Equus_asinus_asinus
ENSNLEG00000001420	CPSF4L	93	90.361	ENSECAG00000024813	CPSF4L	100	90.361	Equus_caballus
ENSNLEG00000001420	CPSF4L	93	87.952	ENSFCAG00000004745	CPSF4L	66	87.952	Felis_catus
ENSNLEG00000001420	CPSF4L	100	99.441	ENSGGOG00000026659	CPSF4L	100	99.441	Gorilla_gorilla
ENSNLEG00000001420	CPSF4L	93	86.747	ENSSTOG00000001849	CPSF4L	95	86.747	Ictidomys_tridecemlineatus
ENSNLEG00000001420	CPSF4L	99	78.652	ENSLAFG00000010697	CPSF4L	100	78.652	Loxodonta_africana
ENSNLEG00000001420	CPSF4L	100	96.089	ENSMFAG00000037840	CPSF4L	100	96.089	Macaca_fascicularis
ENSNLEG00000001420	CPSF4L	100	96.089	ENSMMUG00000001271	CPSF4L	100	96.089	Macaca_mulatta
ENSNLEG00000001420	CPSF4L	100	96.089	ENSMNEG00000045419	CPSF4L	100	96.089	Macaca_nemestrina
ENSNLEG00000001420	CPSF4L	100	96.648	ENSMLEG00000038527	CPSF4L	100	96.648	Mandrillus_leucophaeus
ENSNLEG00000001420	CPSF4L	93	79.518	ENSMAUG00000019519	-	100	79.518	Mesocricetus_auratus
ENSNLEG00000001420	CPSF4L	98	90.286	ENSMICG00000007503	CPSF4L	98	90.286	Microcebus_murinus
ENSNLEG00000001420	CPSF4L	75	80.000	ENSMOCG00000015313	-	93	80.000	Microtus_ochrogaster
ENSNLEG00000001420	CPSF4L	91	76.543	ENSMODG00000025672	CPSF4L	100	76.543	Monodelphis_domestica
ENSNLEG00000001420	CPSF4L	93	74.850	MGP_CAROLIEiJ_G0017369	-	73	74.850	Mus_caroli
ENSNLEG00000001420	CPSF4L	93	75.449	ENSMUSG00000018727	Cpsf4l	73	75.449	Mus_musculus
ENSNLEG00000001420	CPSF4L	70	74.766	MGP_PahariEiJ_G0018499	-	81	70.161	Mus_pahari
ENSNLEG00000001420	CPSF4L	70	71.963	MGP_SPRETEiJ_G0018215	-	82	67.200	Mus_spretus
ENSNLEG00000001420	CPSF4L	93	84.431	ENSMPUG00000014276	CPSF4L	100	84.431	Mustela_putorius_furo
ENSNLEG00000001420	CPSF4L	100	77.095	ENSMLUG00000009617	CPSF4L	100	77.095	Myotis_lucifugus
ENSNLEG00000001420	CPSF4L	92	82.317	ENSNGAG00000009325	-	96	82.317	Nannospalax_galili
ENSNLEG00000001420	CPSF4L	66	77.228	ENSMEUG00000004051	-	99	77.228	Notamacropus_eugenii
ENSNLEG00000001420	CPSF4L	96	67.808	ENSOPRG00000007484	-	99	67.808	Ochotona_princeps
ENSNLEG00000001420	CPSF4L	93	81.325	ENSOCUG00000026495	CPSF4L	74	81.325	Oryctolagus_cuniculus
ENSNLEG00000001420	CPSF4L	100	96.711	ENSPPAG00000037000	-	100	99.320	Pan_paniscus
ENSNLEG00000001420	CPSF4L	97	72.727	ENSPPRG00000001058	CPSF4L	100	72.727	Panthera_pardus
ENSNLEG00000001420	CPSF4L	94	75.740	ENSPTIG00000012676	CPSF4L	100	72.727	Panthera_tigris_altaica
ENSNLEG00000001420	CPSF4L	100	99.441	ENSPTRG00000009598	CPSF4L	100	99.441	Pan_troglodytes
ENSNLEG00000001420	CPSF4L	100	96.648	ENSPANG00000020331	CPSF4L	100	96.648	Papio_anubis
ENSNLEG00000001420	CPSF4L	93	78.916	ENSPEMG00000011680	Cpsf4l	72	78.916	Peromyscus_maniculatus_bairdii
ENSNLEG00000001420	CPSF4L	94	76.190	ENSPCIG00000001889	CPSF4L	99	76.190	Phascolarctos_cinereus
ENSNLEG00000001420	CPSF4L	100	96.711	ENSPPYG00000008589	-	100	96.711	Pongo_abelii
ENSNLEG00000001420	CPSF4L	100	84.615	ENSPCOG00000021801	CPSF4L	100	84.615	Propithecus_coquereli
ENSNLEG00000001420	CPSF4L	98	75.839	ENSPVAG00000006736	CPSF4L	100	75.839	Pteropus_vampyrus
ENSNLEG00000001420	CPSF4L	100	95.531	ENSRBIG00000029048	CPSF4L	100	95.531	Rhinopithecus_bieti
ENSNLEG00000001420	CPSF4L	100	94.972	ENSRROG00000037051	CPSF4L	100	94.972	Rhinopithecus_roxellana
ENSNLEG00000001420	CPSF4L	99	78.808	ENSTTRG00000005243	CPSF4L	100	78.808	Tursiops_truncatus
ENSNLEG00000001420	CPSF4L	75	88.889	ENSUAMG00000007728	CPSF4L	86	88.889	Ursus_americanus
ENSNLEG00000001420	CPSF4L	75	88.889	ENSUMAG00000007869	CPSF4L	86	88.889	Ursus_maritimus