EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000001425 (Gene tree)
Gene ID: 100582820
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 24336 bases
Position: chr2:81278481-81302816
Accession: 100582820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000025633	eIF-3c_N	PF05470.12	3e-232	1	2
ENSNLEP00000025633	eIF-3c_N	PF05470.12	3e-232	2	2
ENSNLEP00000001723	eIF-3c_N	PF05470.12	5.1e-224	1	2
ENSNLEP00000001723	eIF-3c_N	PF05470.12	5.1e-224	2	2
ENSNLEP00000025762	eIF-3c_N	PF05470.12	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000051883	-	2529	XM_012505162	ENSNLEP00000025633	842 (aa)	XP_012360616	A0A2I3FYX7
ENSNLET00000001825	-	2547	-	ENSNLEP00000001723	848 (aa)	-	G1QLA9
ENSNLET00000054630	-	201	-	ENSNLEP00000025762	66 (aa)	-	A0A2I3FZZ6

Gene Model

Click here to download ENSNLEG00000001425's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001425	-	91	93.333	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSNLEG00000001425	-	91	93.333	ENSG00000205609	EIF3CL	100	83.836	Homo_sapiens
ENSNLEG00000001425	-	99	66.238	ENSAPOG00000024092	eif3c	100	68.063	Acanthochromis_polyacanthus
ENSNLEG00000001425	-	91	93.333	ENSAMEG00000015454	-	100	83.495	Ailuropoda_melanoleuca
ENSNLEG00000001425	-	99	66.519	ENSACIG00000015082	eif3c	99	65.752	Amphilophus_citrinellus
ENSNLEG00000001425	-	91	66.667	ENSAOCG00000021466	eif3c	100	66.115	Amphiprion_ocellaris
ENSNLEG00000001425	-	100	65.775	ENSAPEG00000010521	eif3c	100	66.445	Amphiprion_percula
ENSNLEG00000001425	-	96	69.798	ENSATEG00000019001	eif3c	98	65.129	Anabas_testudineus
ENSNLEG00000001425	-	91	88.333	ENSACAG00000005937	-	100	74.784	Anolis_carolinensis
ENSNLEG00000001425	-	100	100.000	ENSANAG00000020640	-	100	100.000	Aotus_nancymaae
ENSNLEG00000001425	-	99	68.146	ENSACLG00000009347	eif3c	90	79.503	Astatotilapia_calliptera
ENSNLEG00000001425	-	88	72.671	ENSACLG00000009322	eif3c	92	72.671	Astatotilapia_calliptera
ENSNLEG00000001425	-	99	66.775	ENSAMXG00000020949	eif3c	98	67.638	Astyanax_mexicanus
ENSNLEG00000001425	-	91	93.333	ENSBTAG00000006543	EIF3CL	100	83.369	Bos_taurus
ENSNLEG00000001425	-	94	40.936	WBGene00001226	eif-3.C	93	41.404	Caenorhabditis_elegans
ENSNLEG00000001425	-	100	100.000	ENSCJAG00000006341	-	100	100.000	Callithrix_jacchus
ENSNLEG00000001425	-	91	93.333	ENSCAFG00000017143	-	100	83.495	Canis_familiaris
ENSNLEG00000001425	-	91	93.333	ENSCAFG00020017587	-	100	83.603	Canis_lupus_dingo
ENSNLEG00000001425	-	91	93.333	ENSCHIG00000024795	-	100	83.477	Capra_hircus
ENSNLEG00000001425	-	91	93.333	ENSTSYG00000003486	-	100	83.297	Carlito_syrichta
ENSNLEG00000001425	-	96	77.107	ENSCAPG00000015887	-	100	77.803	Cavia_aperea
ENSNLEG00000001425	-	91	93.333	ENSCPOG00000007533	-	100	83.064	Cavia_porcellus
ENSNLEG00000001425	-	100	100.000	ENSCCAG00000034928	-	100	100.000	Cebus_capucinus
ENSNLEG00000001425	-	99	72.129	ENSCCAG00000029099	-	99	72.464	Cebus_capucinus
ENSNLEG00000001425	-	91	90.000	ENSCCAG00000027724	-	100	79.158	Cebus_capucinus
ENSNLEG00000001425	-	100	100.000	ENSCATG00000032673	-	100	100.000	Cercocebus_atys
ENSNLEG00000001425	-	91	91.667	ENSCLAG00000011094	-	100	82.632	Chinchilla_lanigera
ENSNLEG00000001425	-	91	93.333	ENSCSAG00000006297	-	100	83.819	Chlorocebus_sabaeus
ENSNLEG00000001425	-	53	97.500	ENSCHOG00000003120	-	76	97.500	Choloepus_hoffmanni
ENSNLEG00000001425	-	72	91.743	ENSCPBG00000012407	-	87	89.683	Chrysemys_picta_bellii
ENSNLEG00000001425	-	92	48.139	ENSCSAVG00000006744	-	100	47.708	Ciona_savignyi
ENSNLEG00000001425	-	100	100.000	ENSCANG00000033626	-	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000001425	-	100	81.210	ENSCGRG00001015265	EIF3C	100	82.181	Cricetulus_griseus_chok1gshd
ENSNLEG00000001425	-	91	86.667	ENSCGRG00000006124	-	99	81.928	Cricetulus_griseus_crigri
ENSNLEG00000001425	-	100	65.696	ENSCSEG00000017770	eif3c	100	65.491	Cynoglossus_semilaevis
ENSNLEG00000001425	-	94	70.833	ENSCVAG00000005402	eif3c	90	78.652	Cyprinodon_variegatus
ENSNLEG00000001425	-	99	66.988	ENSDARG00000016443	eif3c	98	67.417	Danio_rerio
ENSNLEG00000001425	-	91	91.667	ENSDNOG00000031497	-	100	83.387	Dasypus_novemcinctus
ENSNLEG00000001425	-	91	93.333	ENSDORG00000016471	Eif3c	100	82.956	Dipodomys_ordii
ENSNLEG00000001425	-	71	51.475	FBgn0034258	eIF3c	95	48.036	Drosophila_melanogaster
ENSNLEG00000001425	-	91	83.621	ENSETEG00000013527	-	92	83.621	Echinops_telfairi
ENSNLEG00000001425	-	94	75.335	ENSEBUG00000001629	eif3c	89	74.479	Eptatretus_burgeri
ENSNLEG00000001425	-	91	93.333	ENSECAG00000008746	-	100	83.279	Equus_caballus
ENSNLEG00000001425	-	69	55.887	ENSEEUG00000000726	-	64	56.093	Erinaceus_europaeus
ENSNLEG00000001425	-	86	78.598	ENSEEUG00000006148	-	100	80.443	Erinaceus_europaeus
ENSNLEG00000001425	-	99	66.667	ENSELUG00000022257	eif3c	99	68.146	Esox_lucius
ENSNLEG00000001425	-	91	93.333	ENSFCAG00000015782	-	100	83.279	Felis_catus
ENSNLEG00000001425	-	91	93.333	ENSFDAG00000003588	-	100	82.848	Fukomys_damarensis
ENSNLEG00000001425	-	96	70.833	ENSFHEG00000014154	EIF3C	100	68.549	Fundulus_heteroclitus
ENSNLEG00000001425	-	91	66.667	ENSGMOG00000016885	eif3c	99	66.556	Gadus_morhua
ENSNLEG00000001425	-	59	84.615	ENSGALG00000047139	-	65	85.714	Gallus_gallus
ENSNLEG00000001425	-	91	66.667	ENSGACG00000007652	eif3c	100	67.707	Gasterosteus_aculeatus
ENSNLEG00000001425	-	92	69.114	ENSGAGG00000006666	-	100	72.177	Gopherus_agassizii
ENSNLEG00000001425	-	99	78.303	ENSGGOG00000026919	EIF3C	100	83.203	Gorilla_gorilla
ENSNLEG00000001425	-	58	68.821	ENSGGOG00000022677	-	100	68.750	Gorilla_gorilla
ENSNLEG00000001425	-	91	93.333	ENSHGLG00000011445	EIF3C	100	82.740	Heterocephalus_glaber_female
ENSNLEG00000001425	-	91	93.333	ENSHGLG00100000217	EIF3C	100	82.740	Heterocephalus_glaber_male
ENSNLEG00000001425	-	99	63.940	ENSHCOG00000019694	eif3c	98	65.297	Hippocampus_comes
ENSNLEG00000001425	-	91	66.667	ENSIPUG00000016878	eif3c	100	66.111	Ictalurus_punctatus
ENSNLEG00000001425	-	91	93.333	ENSSTOG00000021278	-	100	83.172	Ictidomys_tridecemlineatus
ENSNLEG00000001425	-	91	93.333	ENSJJAG00000012722	Eif3c	100	82.201	Jaculus_jaculus
ENSNLEG00000001425	-	98	67.465	ENSKMAG00000021662	eif3c	89	76.966	Kryptolebias_marmoratus
ENSNLEG00000001425	-	97	68.329	ENSLBEG00000023370	eif3c	97	68.182	Labrus_bergylta
ENSNLEG00000001425	-	91	76.667	ENSLACG00000000770	eif3c	100	69.785	Latimeria_chalumnae
ENSNLEG00000001425	-	91	91.667	ENSLAFG00000027426	-	100	83.064	Loxodonta_africana
ENSNLEG00000001425	-	100	100.000	ENSMFAG00000041930	-	100	100.000	Macaca_fascicularis
ENSNLEG00000001425	-	91	93.333	ENSMMUG00000011798	-	100	83.819	Macaca_mulatta
ENSNLEG00000001425	-	100	100.000	ENSMNEG00000023915	-	100	100.000	Macaca_nemestrina
ENSNLEG00000001425	-	100	100.000	ENSMLEG00000027529	-	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000001425	-	99	67.910	ENSMAMG00000012512	eif3c	99	67.691	Mastacembelus_armatus
ENSNLEG00000001425	-	88	72.671	ENSMZEG00005013685	eif3c	92	72.671	Maylandia_zebra
ENSNLEG00000001425	-	99	67.833	ENSMZEG00005013699	eif3c	89	79.503	Maylandia_zebra
ENSNLEG00000001425	-	100	81.102	ENSMAUG00000010621	Eif3c	100	81.533	Mesocricetus_auratus
ENSNLEG00000001425	-	91	93.333	ENSMICG00000036748	-	100	83.603	Microcebus_murinus
ENSNLEG00000001425	-	100	79.050	ENSMOCG00000004204	Eif3c	100	80.022	Microtus_ochrogaster
ENSNLEG00000001425	-	100	67.614	ENSMMOG00000001572	eif3c	100	66.366	Mola_mola
ENSNLEG00000001425	-	91	90.000	ENSMODG00000015579	-	100	80.541	Monodelphis_domestica
ENSNLEG00000001425	-	88	77.778	ENSMALG00000008907	eif3c	99	67.306	Monopterus_albus
ENSNLEG00000001425	-	100	95.455	MGP_CAROLIEiJ_G0030451	Eif3c	100	95.455	Mus_caroli
ENSNLEG00000001425	-	100	95.455	ENSMUSG00000030738	Eif3c	100	95.455	Mus_musculus
ENSNLEG00000001425	-	100	95.455	MGP_PahariEiJ_G0013661	Eif3c	100	95.455	Mus_pahari
ENSNLEG00000001425	-	100	95.455	MGP_SPRETEiJ_G0031565	Eif3c	100	95.455	Mus_spretus
ENSNLEG00000001425	-	96	79.047	ENSMPUG00000012732	-	100	82.327	Mustela_putorius_furo
ENSNLEG00000001425	-	91	93.333	ENSMLUG00000015558	-	100	82.486	Myotis_lucifugus
ENSNLEG00000001425	-	92	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSNLEG00000001425	-	91	91.667	ENSNGAG00000007177	-	100	82.632	Nannospalax_galili
ENSNLEG00000001425	-	93	52.718	ENSMEUG00000005317	-	100	52.212	Notamacropus_eugenii
ENSNLEG00000001425	-	91	76.667	ENSMEUG00000009939	-	99	66.269	Notamacropus_eugenii
ENSNLEG00000001425	-	91	93.333	ENSOPRG00000000931	-	100	83.172	Ochotona_princeps
ENSNLEG00000001425	-	91	93.333	ENSODEG00000013508	-	100	82.524	Octodon_degus
ENSNLEG00000001425	-	70	56.039	ENSONIG00000011434	eif3c	99	56.039	Oreochromis_niloticus
ENSNLEG00000001425	-	91	90.000	ENSOANG00000011410	-	100	77.070	Ornithorhynchus_anatinus
ENSNLEG00000001425	-	91	93.333	ENSOCUG00000022489	-	100	83.387	Oryctolagus_cuniculus
ENSNLEG00000001425	-	97	68.433	ENSORLG00000006318	eif3c	98	68.914	Oryzias_latipes
ENSNLEG00000001425	-	86	78.261	ENSORLG00020015713	eif3c	96	67.135	Oryzias_latipes_hni
ENSNLEG00000001425	-	91	66.667	ENSORLG00015013772	eif3c	97	67.429	Oryzias_latipes_hsok
ENSNLEG00000001425	-	91	66.667	ENSOMEG00000020450	eif3c	100	66.278	Oryzias_melastigma
ENSNLEG00000001425	-	91	93.333	ENSOGAG00000012737	-	100	83.172	Otolemur_garnettii
ENSNLEG00000001425	-	91	93.333	ENSOARG00000002892	-	100	83.477	Ovis_aries
ENSNLEG00000001425	-	91	93.333	ENSPPRG00000012336	-	100	83.279	Panthera_pardus
ENSNLEG00000001425	-	91	93.333	ENSPTIG00000011712	-	100	83.279	Panthera_tigris_altaica
ENSNLEG00000001425	-	100	100.000	ENSPANG00000021151	-	100	100.000	Papio_anubis
ENSNLEG00000001425	-	99	67.562	ENSPKIG00000002049	eif3c	98	67.991	Paramormyrops_kingsleyae
ENSNLEG00000001425	-	88	78.261	ENSPMGG00000005409	eif3c	100	67.000	Periophthalmus_magnuspinnatus
ENSNLEG00000001425	-	100	80.840	ENSPEMG00000010899	Eif3c	100	82.538	Peromyscus_maniculatus_bairdii
ENSNLEG00000001425	-	91	90.000	ENSPCIG00000025206	-	100	79.957	Phascolarctos_cinereus
ENSNLEG00000001425	-	99	66.846	ENSPFOG00000004476	eif3c	90	76.966	Poecilia_formosa
ENSNLEG00000001425	-	100	67.950	ENSPLAG00000017480	eif3c	89	78.704	Poecilia_latipinna
ENSNLEG00000001425	-	100	68.326	ENSPMEG00000019512	eif3c	100	66.667	Poecilia_mexicana
ENSNLEG00000001425	-	100	68.218	ENSPREG00000023139	eif3c	100	66.704	Poecilia_reticulata
ENSNLEG00000001425	-	100	84.432	ENSPPYG00000007227	-	100	84.432	Pongo_abelii
ENSNLEG00000001425	-	70	84.878	ENSPCAG00000012710	-	100	84.878	Procavia_capensis
ENSNLEG00000001425	-	91	93.333	ENSPCOG00000019289	-	100	83.603	Propithecus_coquereli
ENSNLEG00000001425	-	91	93.333	ENSPVAG00000005804	-	100	83.279	Pteropus_vampyrus
ENSNLEG00000001425	-	86	52.632	ENSPNYG00000016530	eif3c	56	76.289	Pundamilia_nyererei
ENSNLEG00000001425	-	99	67.384	ENSPNAG00000024040	eif3c	98	68.069	Pygocentrus_nattereri
ENSNLEG00000001425	-	91	91.667	ENSRNOG00000018761	Eif3c	100	81.622	Rattus_norvegicus
ENSNLEG00000001425	-	100	100.000	ENSRBIG00000044009	-	100	100.000	Rhinopithecus_bieti
ENSNLEG00000001425	-	100	100.000	ENSRROG00000043626	-	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000001425	-	100	100.000	ENSSBOG00000032155	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000001425	-	96	78.595	ENSSHAG00000011808	-	100	79.710	Sarcophilus_harrisii
ENSNLEG00000001425	-	99	67.935	ENSSFOG00015021823	eif3c	98	66.848	Scleropages_formosus
ENSNLEG00000001425	-	97	66.556	ENSSMAG00000016638	eif3c	97	66.777	Scophthalmus_maximus
ENSNLEG00000001425	-	100	68.527	ENSSDUG00000023117	eif3c	100	68.590	Seriola_dumerili
ENSNLEG00000001425	-	100	66.969	ENSSLDG00000009706	eif3c	98	66.559	Seriola_lalandi_dorsalis
ENSNLEG00000001425	-	91	85.000	ENSSPUG00000016470	-	99	75.897	Sphenodon_punctatus
ENSNLEG00000001425	-	100	66.596	ENSSPAG00000000426	eif3c	100	67.095	Stegastes_partitus
ENSNLEG00000001425	-	91	93.333	ENSSSCG00000034927	-	100	83.279	Sus_scrofa
ENSNLEG00000001425	-	91	66.667	ENSTRUG00000008951	eif3c	99	65.817	Takifugu_rubripes
ENSNLEG00000001425	-	95	76.879	ENSTNIG00000015210	eif3c	100	65.872	Tetraodon_nigroviridis
ENSNLEG00000001425	-	91	93.333	ENSTTRG00000005880	-	100	83.279	Tursiops_truncatus
ENSNLEG00000001425	-	75	83.259	ENSUAMG00000001127	-	91	89.329	Ursus_americanus
ENSNLEG00000001425	-	91	93.333	ENSUMAG00000010927	-	100	83.387	Ursus_maritimus
ENSNLEG00000001425	-	91	93.333	ENSVVUG00000025970	-	100	82.613	Vulpes_vulpes
ENSNLEG00000001425	-	91	76.667	ENSXETG00000002941	eif3c	100	69.083	Xenopus_tropicalis
ENSNLEG00000001425	-	96	77.844	ENSXMAG00000013796	eif3c	91	76.404	Xiphophorus_maculatus