EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001494 (Gene tree)
Gene ID: 100605886
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 125920 bases
Position: chr18:66698377-66824296
Accession: 100605886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000001766	rRNA_proc-arch	PF13234.6	2.5e-87	1	1
ENSNLEP00000026332	rRNA_proc-arch	PF13234.6	2.7e-87	1	1
ENSNLEP00000001766	DEAD	PF00270.29	5.9e-17	1	1
ENSNLEP00000026332	DEAD	PF00270.29	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000001869	MTREX-202	3033	XM_012497068	ENSNLEP00000001766	1010 (aa)	XP_012352522	G1QLF1
ENSNLET00000033523	MTREX-201	3087	-	ENSNLEP00000026332	1028 (aa)	-	A0A2I3G2I7
ENSNLET00000046296	MTREX-203	270	-	ENSNLEP00000038936	89 (aa)	-	A0A2I3H5Y8

Gene Model

Click here to download ENSNLEG00000001494's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001494	MTREX	91	34.995	ENSNLEG00000006451	SKIV2L	86	34.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001494	MTREX	100	95.690	ENSG00000039123	MTREX	100	95.690	Homo_sapiens
ENSNLEG00000001494	MTREX	100	79.087	ENSAPOG00000007814	mtrex	100	79.333	Acanthochromis_polyacanthus
ENSNLEG00000001494	MTREX	100	94.450	ENSAMEG00000013856	MTREX	100	94.450	Ailuropoda_melanoleuca
ENSNLEG00000001494	MTREX	91	83.837	ENSACIG00000015117	mtrex	96	83.837	Amphilophus_citrinellus
ENSNLEG00000001494	MTREX	100	79.087	ENSAOCG00000011884	mtrex	100	79.373	Amphiprion_ocellaris
ENSNLEG00000001494	MTREX	100	79.087	ENSAPEG00000019384	mtrex	100	79.373	Amphiprion_percula
ENSNLEG00000001494	MTREX	100	79.924	ENSATEG00000015117	mtrex	100	80.114	Anabas_testudineus
ENSNLEG00000001494	MTREX	95	88.597	ENSAPLG00000009694	MTREX	99	88.597	Anas_platyrhynchos
ENSNLEG00000001494	MTREX	100	86.877	ENSACAG00000015200	MTREX	96	86.686	Anolis_carolinensis
ENSNLEG00000001494	MTREX	100	95.115	ENSANAG00000023095	MTREX	100	95.115	Aotus_nancymaae
ENSNLEG00000001494	MTREX	100	78.402	ENSACLG00000001921	mtrex	100	78.857	Astatotilapia_calliptera
ENSNLEG00000001494	MTREX	97	77.941	ENSAMXG00000018751	mtrex	99	80.060	Astyanax_mexicanus
ENSNLEG00000001494	MTREX	100	94.253	ENSBTAG00000010518	MTREX	100	94.157	Bos_taurus
ENSNLEG00000001494	MTREX	91	51.207	WBGene00012342	mtr-4	95	50.610	Caenorhabditis_elegans
ENSNLEG00000001494	MTREX	100	94.000	ENSCJAG00000001773	MTREX	100	94.000	Callithrix_jacchus
ENSNLEG00000001494	MTREX	100	94.732	ENSCAFG00000006818	MTREX	100	94.732	Canis_familiaris
ENSNLEG00000001494	MTREX	100	94.732	ENSCAFG00020024352	MTREX	100	94.732	Canis_lupus_dingo
ENSNLEG00000001494	MTREX	100	94.444	ENSCHIG00000024413	MTREX	100	94.444	Capra_hircus
ENSNLEG00000001494	MTREX	94	94.393	ENSTSYG00000007389	MTREX	100	94.393	Carlito_syrichta
ENSNLEG00000001494	MTREX	96	71.673	ENSCAPG00000008696	MTREX	100	71.673	Cavia_aperea
ENSNLEG00000001494	MTREX	100	94.061	ENSCPOG00000009797	MTREX	100	94.061	Cavia_porcellus
ENSNLEG00000001494	MTREX	100	95.019	ENSCCAG00000014177	MTREX	100	95.019	Cebus_capucinus
ENSNLEG00000001494	MTREX	100	95.402	ENSCATG00000042153	MTREX	100	95.402	Cercocebus_atys
ENSNLEG00000001494	MTREX	100	94.157	ENSCLAG00000006622	MTREX	100	94.157	Chinchilla_lanigera
ENSNLEG00000001494	MTREX	100	90.926	ENSCSAG00000016445	MTREX	100	90.926	Chlorocebus_sabaeus
ENSNLEG00000001494	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSNLEG00000001494	MTREX	100	87.656	ENSCPBG00000026551	MTREX	94	87.943	Chrysemys_picta_bellii
ENSNLEG00000001494	MTREX	99	64.286	ENSCING00000003239	-	99	63.619	Ciona_intestinalis
ENSNLEG00000001494	MTREX	99	62.678	ENSCSAVG00000009304	-	100	66.494	Ciona_savignyi
ENSNLEG00000001494	MTREX	100	95.307	ENSCANG00000035770	MTREX	100	95.307	Colobus_angolensis_palliatus
ENSNLEG00000001494	MTREX	100	93.774	ENSCGRG00001024680	Mtrex	100	93.774	Cricetulus_griseus_chok1gshd
ENSNLEG00000001494	MTREX	100	93.774	ENSCGRG00000000307	Mtrex	100	93.774	Cricetulus_griseus_crigri
ENSNLEG00000001494	MTREX	100	77.884	ENSCSEG00000018621	mtrex	98	78.074	Cynoglossus_semilaevis
ENSNLEG00000001494	MTREX	100	79.829	ENSCVAG00000004556	mtrex	100	79.790	Cyprinodon_variegatus
ENSNLEG00000001494	MTREX	100	81.030	ENSDARG00000013457	mtrex	100	80.817	Danio_rerio
ENSNLEG00000001494	MTREX	100	93.034	ENSDNOG00000015375	MTREX	100	93.034	Dasypus_novemcinctus
ENSNLEG00000001494	MTREX	100	94.061	ENSDORG00000006782	Mtrex	100	94.061	Dipodomys_ordii
ENSNLEG00000001494	MTREX	92	63.344	FBgn0001986	Mtr4	92	62.703	Drosophila_melanogaster
ENSNLEG00000001494	MTREX	90	78.738	ENSETEG00000000727	MTREX	90	78.738	Echinops_telfairi
ENSNLEG00000001494	MTREX	99	71.278	ENSEBUG00000012869	mtrex	99	71.278	Eptatretus_burgeri
ENSNLEG00000001494	MTREX	100	93.966	ENSEASG00005013270	MTREX	100	93.966	Equus_asinus_asinus
ENSNLEG00000001494	MTREX	100	94.061	ENSECAG00000023723	MTREX	100	94.665	Equus_caballus
ENSNLEG00000001494	MTREX	98	84.323	ENSEEUG00000000527	MTREX	100	84.323	Erinaceus_europaeus
ENSNLEG00000001494	MTREX	98	81.026	ENSELUG00000004898	mtrex	100	85.220	Esox_lucius
ENSNLEG00000001494	MTREX	100	94.349	ENSFCAG00000010575	MTREX	100	94.349	Felis_catus
ENSNLEG00000001494	MTREX	100	85.920	ENSFALG00000010850	MTREX	100	85.824	Ficedula_albicollis
ENSNLEG00000001494	MTREX	100	93.966	ENSFDAG00000011199	MTREX	100	93.678	Fukomys_damarensis
ENSNLEG00000001494	MTREX	100	79.734	ENSFHEG00000023014	mtrex	100	78.463	Fundulus_heteroclitus
ENSNLEG00000001494	MTREX	100	75.619	ENSGMOG00000014702	mtrex	100	75.905	Gadus_morhua
ENSNLEG00000001494	MTREX	100	86.973	ENSGALG00000014709	MTREX	86	86.973	Gallus_gallus
ENSNLEG00000001494	MTREX	100	79.638	ENSGAFG00000012425	mtrex	98	83.299	Gambusia_affinis
ENSNLEG00000001494	MTREX	100	74.881	ENSGACG00000016260	mtrex	96	80.803	Gasterosteus_aculeatus
ENSNLEG00000001494	MTREX	100	87.751	ENSGAGG00000020036	MTREX	100	87.368	Gopherus_agassizii
ENSNLEG00000001494	MTREX	100	95.785	ENSGGOG00000001867	MTREX	100	95.785	Gorilla_gorilla
ENSNLEG00000001494	MTREX	100	78.402	ENSHBUG00000006229	mtrex	100	78.857	Haplochromis_burtoni
ENSNLEG00000001494	MTREX	100	93.870	ENSHGLG00000019445	SKIV2L2	100	93.774	Heterocephalus_glaber_female
ENSNLEG00000001494	MTREX	100	93.870	ENSHGLG00100011833	SKIV2L2	100	93.774	Heterocephalus_glaber_male
ENSNLEG00000001494	MTREX	91	80.894	ENSHCOG00000019995	mtrex	100	80.894	Hippocampus_comes
ENSNLEG00000001494	MTREX	100	81.220	ENSIPUG00000024348	skiv2l2	100	81.048	Ictalurus_punctatus
ENSNLEG00000001494	MTREX	100	94.540	ENSSTOG00000010802	MTREX	100	94.540	Ictidomys_tridecemlineatus
ENSNLEG00000001494	MTREX	100	90.402	ENSJJAG00000020975	Mtrex	100	91.087	Jaculus_jaculus
ENSNLEG00000001494	MTREX	100	79.068	ENSKMAG00000012642	mtrex	100	78.972	Kryptolebias_marmoratus
ENSNLEG00000001494	MTREX	100	79.468	ENSLBEG00000019367	mtrex	99	82.206	Labrus_bergylta
ENSNLEG00000001494	MTREX	100	84.608	ENSLACG00000009075	MTREX	100	84.175	Latimeria_chalumnae
ENSNLEG00000001494	MTREX	100	83.556	ENSLOCG00000010186	mtrex	100	83.174	Lepisosteus_oculatus
ENSNLEG00000001494	MTREX	99	92.146	ENSLAFG00000010497	MTREX	100	92.146	Loxodonta_africana
ENSNLEG00000001494	MTREX	100	95.402	ENSMFAG00000031610	MTREX	100	95.402	Macaca_fascicularis
ENSNLEG00000001494	MTREX	100	93.881	ENSMMUG00000010379	MTREX	100	93.881	Macaca_mulatta
ENSNLEG00000001494	MTREX	100	95.402	ENSMNEG00000032746	MTREX	100	95.402	Macaca_nemestrina
ENSNLEG00000001494	MTREX	100	95.402	ENSMLEG00000041051	MTREX	100	95.402	Mandrillus_leucophaeus
ENSNLEG00000001494	MTREX	95	81.900	ENSMAMG00000016753	mtrex	96	84.271	Mastacembelus_armatus
ENSNLEG00000001494	MTREX	100	78.402	ENSMZEG00005000414	mtrex	100	78.857	Maylandia_zebra
ENSNLEG00000001494	MTREX	94	65.859	ENSMGAG00000003980	MTREX	99	65.859	Meleagris_gallopavo
ENSNLEG00000001494	MTREX	100	93.199	ENSMAUG00000010727	Mtrex	100	93.678	Mesocricetus_auratus
ENSNLEG00000001494	MTREX	100	95.211	ENSMICG00000012779	MTREX	100	95.211	Microcebus_murinus
ENSNLEG00000001494	MTREX	100	93.582	ENSMOCG00000019886	Mtrex	100	93.582	Microtus_ochrogaster
ENSNLEG00000001494	MTREX	100	78.190	ENSMMOG00000002476	mtrex	100	78.476	Mola_mola
ENSNLEG00000001494	MTREX	100	89.080	ENSMODG00000019494	MTREX	100	89.080	Monodelphis_domestica
ENSNLEG00000001494	MTREX	100	70.741	ENSMALG00000002917	mtrex	99	78.528	Monopterus_albus
ENSNLEG00000001494	MTREX	100	93.103	MGP_CAROLIEiJ_G0018896	Mtrex	100	93.008	Mus_caroli
ENSNLEG00000001494	MTREX	100	93.391	ENSMUSG00000016018	Mtrex	100	93.295	Mus_musculus
ENSNLEG00000001494	MTREX	100	93.295	MGP_PahariEiJ_G0015967	Mtrex	100	93.199	Mus_pahari
ENSNLEG00000001494	MTREX	100	93.391	MGP_SPRETEiJ_G0019775	Mtrex	100	93.295	Mus_spretus
ENSNLEG00000001494	MTREX	100	94.732	ENSMPUG00000007619	MTREX	100	94.732	Mustela_putorius_furo
ENSNLEG00000001494	MTREX	100	92.646	ENSMLUG00000001152	MTREX	100	92.550	Myotis_lucifugus
ENSNLEG00000001494	MTREX	100	94.157	ENSNGAG00000011938	Mtrex	100	94.157	Nannospalax_galili
ENSNLEG00000001494	MTREX	100	78.497	ENSNBRG00000011293	mtrex	100	78.952	Neolamprologus_brichardi
ENSNLEG00000001494	MTREX	84	100.000	ENSMEUG00000006496	-	82	100.000	Notamacropus_eugenii
ENSNLEG00000001494	MTREX	100	79.693	ENSOPRG00000008009	MTREX	100	79.693	Ochotona_princeps
ENSNLEG00000001494	MTREX	100	93.391	ENSODEG00000017234	MTREX	100	93.391	Octodon_degus
ENSNLEG00000001494	MTREX	100	78.306	ENSONIG00000007587	mtrex	100	78.762	Oreochromis_niloticus
ENSNLEG00000001494	MTREX	50	89.883	ENSOANG00000004885	-	99	89.883	Ornithorhynchus_anatinus
ENSNLEG00000001494	MTREX	100	94.636	ENSOCUG00000004463	MTREX	100	94.636	Oryctolagus_cuniculus
ENSNLEG00000001494	MTREX	100	78.592	ENSORLG00000005443	mtrex	100	78.592	Oryzias_latipes
ENSNLEG00000001494	MTREX	100	78.497	ENSORLG00020006329	mtrex	100	78.497	Oryzias_latipes_hni
ENSNLEG00000001494	MTREX	100	78.592	ENSORLG00015012924	mtrex	100	78.653	Oryzias_latipes_hsok
ENSNLEG00000001494	MTREX	100	78.083	ENSOMEG00000008825	mtrex	100	77.894	Oryzias_melastigma
ENSNLEG00000001494	MTREX	100	94.828	ENSOGAG00000002886	MTREX	100	94.828	Otolemur_garnettii
ENSNLEG00000001494	MTREX	100	94.078	ENSOARG00000007764	MTREX	100	94.078	Ovis_aries
ENSNLEG00000001494	MTREX	100	95.881	ENSPPAG00000039291	MTREX	100	95.881	Pan_paniscus
ENSNLEG00000001494	MTREX	100	94.349	ENSPPRG00000019701	MTREX	100	94.349	Panthera_pardus
ENSNLEG00000001494	MTREX	100	92.816	ENSPTIG00000009313	MTREX	100	92.816	Panthera_tigris_altaica
ENSNLEG00000001494	MTREX	100	95.881	ENSPTRG00000016878	MTREX	100	95.881	Pan_troglodytes
ENSNLEG00000001494	MTREX	100	95.307	ENSPANG00000009697	MTREX	100	95.307	Papio_anubis
ENSNLEG00000001494	MTREX	100	83.222	ENSPKIG00000020833	mtrex	100	82.841	Paramormyrops_kingsleyae
ENSNLEG00000001494	MTREX	100	87.847	ENSPSIG00000012150	MTREX	100	87.847	Pelodiscus_sinensis
ENSNLEG00000001494	MTREX	100	77.333	ENSPMGG00000002582	mtrex	100	77.333	Periophthalmus_magnuspinnatus
ENSNLEG00000001494	MTREX	95	62.325	ENSPMAG00000009668	mtrex	100	62.024	Petromyzon_marinus
ENSNLEG00000001494	MTREX	91	92.308	ENSPCIG00000024730	MTREX	100	92.308	Phascolarctos_cinereus
ENSNLEG00000001494	MTREX	75	82.174	ENSPFOG00000003141	mtrex	100	82.405	Poecilia_formosa
ENSNLEG00000001494	MTREX	100	79.790	ENSPLAG00000021311	mtrex	100	79.734	Poecilia_latipinna
ENSNLEG00000001494	MTREX	91	83.351	ENSPMEG00000010597	mtrex	99	83.665	Poecilia_mexicana
ENSNLEG00000001494	MTREX	100	79.448	ENSPREG00000003089	mtrex	100	79.543	Poecilia_reticulata
ENSNLEG00000001494	MTREX	98	95.716	ENSPPYG00000015469	MTREX	98	95.716	Pongo_abelii
ENSNLEG00000001494	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSNLEG00000001494	MTREX	100	88.900	ENSPCOG00000018092	MTREX	98	91.332	Propithecus_coquereli
ENSNLEG00000001494	MTREX	100	94.540	ENSPVAG00000002445	MTREX	100	94.540	Pteropus_vampyrus
ENSNLEG00000001494	MTREX	100	78.306	ENSPNYG00000006164	mtrex	100	78.762	Pundamilia_nyererei
ENSNLEG00000001494	MTREX	100	82.269	ENSPNAG00000008794	mtrex	100	82.364	Pygocentrus_nattereri
ENSNLEG00000001494	MTREX	99	93.307	ENSRNOG00000010125	Mtrex	97	93.307	Rattus_norvegicus
ENSNLEG00000001494	MTREX	100	93.678	ENSRBIG00000034930	MTREX	100	93.678	Rhinopithecus_bieti
ENSNLEG00000001494	MTREX	100	95.402	ENSRROG00000039895	MTREX	100	95.402	Rhinopithecus_roxellana
ENSNLEG00000001494	MTREX	89	52.615	YJL050W	MTR4	89	52.615	Saccharomyces_cerevisiae
ENSNLEG00000001494	MTREX	100	94.923	ENSSBOG00000026693	MTREX	100	94.923	Saimiri_boliviensis_boliviensis
ENSNLEG00000001494	MTREX	96	91.191	ENSSHAG00000004600	MTREX	100	91.191	Sarcophilus_harrisii
ENSNLEG00000001494	MTREX	100	83.683	ENSSFOG00015014355	skiv2l2	100	83.588	Scleropages_formosus
ENSNLEG00000001494	MTREX	100	78.517	ENSSMAG00000007572	mtrex	100	78.782	Scophthalmus_maximus
ENSNLEG00000001494	MTREX	100	79.714	ENSSDUG00000023789	mtrex	100	79.714	Seriola_dumerili
ENSNLEG00000001494	MTREX	100	79.563	ENSSLDG00000006301	mtrex	100	79.524	Seriola_lalandi_dorsalis
ENSNLEG00000001494	MTREX	100	90.421	ENSSARG00000008387	MTREX	100	90.421	Sorex_araneus
ENSNLEG00000001494	MTREX	100	76.782	ENSSPUG00000007071	MTREX	100	76.782	Sphenodon_punctatus
ENSNLEG00000001494	MTREX	91	83.141	ENSSPAG00000011319	mtrex	94	83.665	Stegastes_partitus
ENSNLEG00000001494	MTREX	100	94.732	ENSSSCG00000016911	MTREX	100	94.732	Sus_scrofa
ENSNLEG00000001494	MTREX	100	85.742	ENSTGUG00000002480	MTREX	100	85.742	Taeniopygia_guttata
ENSNLEG00000001494	MTREX	100	78.897	ENSTRUG00000014571	mtrex	100	79.107	Takifugu_rubripes
ENSNLEG00000001494	MTREX	100	80.843	ENSTBEG00000007769	MTREX	100	80.843	Tupaia_belangeri
ENSNLEG00000001494	MTREX	100	94.157	ENSTTRG00000008678	MTREX	100	94.061	Tursiops_truncatus
ENSNLEG00000001494	MTREX	100	94.540	ENSUAMG00000023061	MTREX	100	94.540	Ursus_americanus
ENSNLEG00000001494	MTREX	100	93.881	ENSUMAG00000009373	MTREX	99	95.069	Ursus_maritimus
ENSNLEG00000001494	MTREX	95	99.265	ENSVPAG00000011174	MTREX	92	99.265	Vicugna_pacos
ENSNLEG00000001494	MTREX	100	94.732	ENSVVUG00000021337	MTREX	100	94.732	Vulpes_vulpes
ENSNLEG00000001494	MTREX	100	84.689	ENSXETG00000032798	MTREX	100	84.402	Xenopus_tropicalis
ENSNLEG00000001494	MTREX	100	79.448	ENSXMAG00000004799	mtrex	97	83.333	Xiphophorus_maculatus