EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000001598 (Gene tree)
Gene ID: 100583237
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 33286 bases
Position: chr19:34397825-34431110
Accession: 100583237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000002013	Btz	PF09405.10	1.6e-23	1	1
ENSNLEP00000046514	Btz	PF09405.10	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000002124	CASC3-201	4017	XM_003278263	ENSNLEP00000002013	702 (aa)	XP_003278311	G1QM47
ENSNLET00000035819	CASC3-202	2100	-	ENSNLEP00000046514	699 (aa)	-	A0A2I3HSD6

Gene Model

Click here to download ENSNLEG00000001598's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001598	CASC3	100	97.866	ENSG00000108349	CASC3	100	97.866	Homo_sapiens
ENSNLEG00000001598	CASC3	100	94.452	ENSAMEG00000007764	CASC3	100	94.452	Ailuropoda_melanoleuca
ENSNLEG00000001598	CASC3	78	50.180	ENSACIG00000000720	casc3	83	50.357	Amphilophus_citrinellus
ENSNLEG00000001598	CASC3	82	53.571	ENSAOCG00000016676	casc3	76	52.318	Amphiprion_ocellaris
ENSNLEG00000001598	CASC3	74	53.571	ENSAPEG00000006787	casc3	69	53.086	Amphiprion_percula
ENSNLEG00000001598	CASC3	73	55.603	ENSATEG00000017196	casc3	76	54.045	Anabas_testudineus
ENSNLEG00000001598	CASC3	91	71.032	ENSACAG00000002674	CASC3	99	65.385	Anolis_carolinensis
ENSNLEG00000001598	CASC3	99	84.081	ENSANAG00000034820	-	99	87.611	Aotus_nancymaae
ENSNLEG00000001598	CASC3	66	97.189	ENSANAG00000031954	-	100	97.189	Aotus_nancymaae
ENSNLEG00000001598	CASC3	100	92.319	ENSBTAG00000006250	CASC3	100	92.319	Bos_taurus
ENSNLEG00000001598	CASC3	100	94.310	ENSCJAG00000016032	CASC3	100	94.310	Callithrix_jacchus
ENSNLEG00000001598	CASC3	100	94.452	ENSCAFG00000016141	CASC3	100	94.452	Canis_familiaris
ENSNLEG00000001598	CASC3	100	93.608	ENSCAFG00020018882	CASC3	100	94.389	Canis_lupus_dingo
ENSNLEG00000001598	CASC3	100	91.714	ENSCHIG00000006338	CASC3	100	91.714	Capra_hircus
ENSNLEG00000001598	CASC3	100	88.336	ENSTSYG00000002975	CASC3	89	94.864	Carlito_syrichta
ENSNLEG00000001598	CASC3	88	87.825	ENSCAPG00000010514	CASC3	100	87.825	Cavia_aperea
ENSNLEG00000001598	CASC3	100	87.340	ENSCPOG00000015139	CASC3	100	87.198	Cavia_porcellus
ENSNLEG00000001598	CASC3	100	96.023	ENSCCAG00000033620	CASC3	100	96.023	Cebus_capucinus
ENSNLEG00000001598	CASC3	100	97.727	ENSCATG00000033593	CASC3	100	97.727	Cercocebus_atys
ENSNLEG00000001598	CASC3	100	89.189	ENSCLAG00000013730	CASC3	100	88.762	Chinchilla_lanigera
ENSNLEG00000001598	CASC3	100	97.585	ENSCSAG00000002777	CASC3	100	97.585	Chlorocebus_sabaeus
ENSNLEG00000001598	CASC3	99	73.803	ENSCPBG00000004750	CASC3	99	73.662	Chrysemys_picta_bellii
ENSNLEG00000001598	CASC3	100	97.585	ENSCANG00000008814	CASC3	100	97.585	Colobus_angolensis_palliatus
ENSNLEG00000001598	CASC3	100	91.750	ENSCGRG00001014706	Casc3	100	91.607	Cricetulus_griseus_chok1gshd
ENSNLEG00000001598	CASC3	100	84.495	ENSCGRG00000001952	Casc3	96	91.332	Cricetulus_griseus_crigri
ENSNLEG00000001598	CASC3	85	50.303	ENSCSEG00000010047	casc3	59	60.109	Cynoglossus_semilaevis
ENSNLEG00000001598	CASC3	65	69.065	ENSCVAG00000014935	casc3	77	56.129	Cyprinodon_variegatus
ENSNLEG00000001598	CASC3	100	93.030	ENSDNOG00000017249	CASC3	96	93.030	Dasypus_novemcinctus
ENSNLEG00000001598	CASC3	100	83.642	ENSETEG00000013720	CASC3	100	83.499	Echinops_telfairi
ENSNLEG00000001598	CASC3	99	36.495	ENSEBUG00000010654	casc3	98	35.600	Eptatretus_burgeri
ENSNLEG00000001598	CASC3	100	92.614	ENSEASG00005002909	CASC3	100	94.426	Equus_asinus_asinus
ENSNLEG00000001598	CASC3	100	93.457	ENSECAG00000019947	CASC3	88	93.457	Equus_caballus
ENSNLEG00000001598	CASC3	73	88.867	ENSEEUG00000014253	CASC3	100	88.867	Erinaceus_europaeus
ENSNLEG00000001598	CASC3	100	94.168	ENSFCAG00000014998	CASC3	100	94.168	Felis_catus
ENSNLEG00000001598	CASC3	88	72.188	ENSFALG00000000412	CASC3	98	72.126	Ficedula_albicollis
ENSNLEG00000001598	CASC3	93	86.544	ENSFDAG00000020696	CASC3	100	86.544	Fukomys_damarensis
ENSNLEG00000001598	CASC3	76	54.658	ENSFHEG00000015793	casc3	77	54.455	Fundulus_heteroclitus
ENSNLEG00000001598	CASC3	90	75.314	ENSGALG00000031813	CASC3	99	68.608	Gallus_gallus
ENSNLEG00000001598	CASC3	73	51.839	ENSGAFG00000017148	casc3	67	49.355	Gambusia_affinis
ENSNLEG00000001598	CASC3	88	76.414	ENSGAGG00000008432	CASC3	94	76.898	Gopherus_agassizii
ENSNLEG00000001598	CASC3	100	97.724	ENSGGOG00000005067	CASC3	100	97.724	Gorilla_gorilla
ENSNLEG00000001598	CASC3	75	54.859	ENSHBUG00000013155	casc3	80	54.605	Haplochromis_burtoni
ENSNLEG00000001598	CASC3	100	89.047	ENSHGLG00000012117	CASC3	100	89.047	Heterocephalus_glaber_female
ENSNLEG00000001598	CASC3	89	88.658	ENSHGLG00100002268	CASC3	99	89.246	Heterocephalus_glaber_male
ENSNLEG00000001598	CASC3	100	92.461	ENSSTOG00000006374	CASC3	100	92.461	Ictidomys_tridecemlineatus
ENSNLEG00000001598	CASC3	100	90.341	ENSJJAG00000023525	Casc3	100	89.631	Jaculus_jaculus
ENSNLEG00000001598	CASC3	66	64.557	ENSKMAG00000019507	casc3	81	49.303	Kryptolebias_marmoratus
ENSNLEG00000001598	CASC3	64	69.065	ENSLBEG00000005435	casc3	57	60.674	Labrus_bergylta
ENSNLEG00000001598	CASC3	90	59.695	ENSLACG00000013200	CASC3	99	55.830	Latimeria_chalumnae
ENSNLEG00000001598	CASC3	73	73.786	ENSLOCG00000013518	casc3	71	72.330	Lepisosteus_oculatus
ENSNLEG00000001598	CASC3	100	91.323	ENSLAFG00000000606	CASC3	100	91.323	Loxodonta_africana
ENSNLEG00000001598	CASC3	100	97.727	ENSMFAG00000041496	CASC3	100	99.338	Macaca_fascicularis
ENSNLEG00000001598	CASC3	100	97.727	ENSMMUG00000045187	CASC3	100	97.727	Macaca_mulatta
ENSNLEG00000001598	CASC3	89	97.448	ENSMLEG00000029049	CASC3	99	97.448	Mandrillus_leucophaeus
ENSNLEG00000001598	CASC3	75	53.543	ENSMAMG00000005235	casc3	69	55.118	Mastacembelus_armatus
ENSNLEG00000001598	CASC3	86	74.300	ENSMGAG00000013247	CASC3	99	73.659	Meleagris_gallopavo
ENSNLEG00000001598	CASC3	71	89.800	ENSMAUG00000006023	Casc3	100	74.822	Mesocricetus_auratus
ENSNLEG00000001598	CASC3	100	92.045	ENSMICG00000003321	CASC3	100	92.330	Microcebus_murinus
ENSNLEG00000001598	CASC3	100	91.880	ENSMOCG00000013644	Casc3	100	90.741	Microtus_ochrogaster
ENSNLEG00000001598	CASC3	78	54.799	ENSMMOG00000014339	casc3	76	53.548	Mola_mola
ENSNLEG00000001598	CASC3	100	77.620	ENSMODG00000013044	CASC3	92	77.620	Monodelphis_domestica
ENSNLEG00000001598	CASC3	100	90.612	MGP_CAROLIEiJ_G0017099	Casc3	100	89.758	Mus_caroli
ENSNLEG00000001598	CASC3	100	89.900	ENSMUSG00000078676	Casc3	100	89.047	Mus_musculus
ENSNLEG00000001598	CASC3	100	89.900	MGP_SPRETEiJ_G0017943	Casc3	100	89.047	Mus_spretus
ENSNLEG00000001598	CASC3	100	93.599	ENSMPUG00000014903	CASC3	100	93.599	Mustela_putorius_furo
ENSNLEG00000001598	CASC3	100	91.348	ENSMLUG00000010520	CASC3	100	89.787	Myotis_lucifugus
ENSNLEG00000001598	CASC3	100	90.754	ENSNGAG00000023121	Casc3	100	89.504	Nannospalax_galili
ENSNLEG00000001598	CASC3	81	90.845	ENSMEUG00000015662	CASC3	97	70.755	Notamacropus_eugenii
ENSNLEG00000001598	CASC3	73	90.820	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSNLEG00000001598	CASC3	100	88.102	ENSODEG00000017858	CASC3	100	88.385	Octodon_degus
ENSNLEG00000001598	CASC3	74	54.969	ENSONIG00000009337	casc3	91	51.956	Oreochromis_niloticus
ENSNLEG00000001598	CASC3	79	53.979	ENSOANG00000003499	-	82	68.317	Ornithorhynchus_anatinus
ENSNLEG00000001598	CASC3	100	93.741	ENSOCUG00000002954	CASC3	100	92.745	Oryctolagus_cuniculus
ENSNLEG00000001598	CASC3	99	94.134	ENSOGAG00000034486	CASC3	98	94.134	Otolemur_garnettii
ENSNLEG00000001598	CASC3	100	92.176	ENSOARG00000013239	CASC3	100	92.176	Ovis_aries
ENSNLEG00000001598	CASC3	100	97.724	ENSPPAG00000035069	CASC3	100	97.724	Pan_paniscus
ENSNLEG00000001598	CASC3	100	94.168	ENSPPRG00000023670	CASC3	100	94.168	Panthera_pardus
ENSNLEG00000001598	CASC3	91	93.721	ENSPTIG00000010891	CASC3	91	94.349	Panthera_tigris_altaica
ENSNLEG00000001598	CASC3	100	97.727	ENSPANG00000021708	CASC3	100	97.727	Papio_anubis
ENSNLEG00000001598	CASC3	99	48.550	ENSPKIG00000023186	casc3	98	45.557	Paramormyrops_kingsleyae
ENSNLEG00000001598	CASC3	100	91.465	ENSPEMG00000009774	Casc3	100	91.038	Peromyscus_maniculatus_bairdii
ENSNLEG00000001598	CASC3	100	80.851	ENSPCIG00000025678	CASC3	100	81.277	Phascolarctos_cinereus
ENSNLEG00000001598	CASC3	90	49.074	ENSPFOG00000017632	casc3	92	48.690	Poecilia_formosa
ENSNLEG00000001598	CASC3	76	54.403	ENSPLAG00000005268	casc3	77	53.922	Poecilia_latipinna
ENSNLEG00000001598	CASC3	69	47.239	ENSPMEG00000010299	casc3	73	48.667	Poecilia_mexicana
ENSNLEG00000001598	CASC3	65	66.429	ENSPREG00000011856	casc3	82	50.805	Poecilia_reticulata
ENSNLEG00000001598	CASC3	100	97.582	ENSPPYG00000008467	CASC3	100	97.582	Pongo_abelii
ENSNLEG00000001598	CASC3	100	91.477	ENSPCOG00000008183	CASC3	100	92.614	Propithecus_coquereli
ENSNLEG00000001598	CASC3	100	93.172	ENSPVAG00000008556	CASC3	100	93.172	Pteropus_vampyrus
ENSNLEG00000001598	CASC3	75	54.859	ENSPNYG00000011962	casc3	80	54.605	Pundamilia_nyererei
ENSNLEG00000001598	CASC3	91	92.384	ENSRNOG00000009716	Casc3	53	89.676	Rattus_norvegicus
ENSNLEG00000001598	CASC3	100	97.869	ENSRBIG00000033289	CASC3	100	97.290	Rhinopithecus_bieti
ENSNLEG00000001598	CASC3	100	97.869	ENSRROG00000022337	CASC3	100	97.869	Rhinopithecus_roxellana
ENSNLEG00000001598	CASC3	88	96.278	ENSSBOG00000031406	CASC3	98	96.278	Saimiri_boliviensis_boliviensis
ENSNLEG00000001598	CASC3	89	84.076	ENSSHAG00000013338	CASC3	99	83.360	Sarcophilus_harrisii
ENSNLEG00000001598	CASC3	66	67.361	ENSSMAG00000016096	casc3	55	66.225	Scophthalmus_maximus
ENSNLEG00000001598	CASC3	78	52.229	ENSSLDG00000020308	casc3	88	50.479	Seriola_lalandi_dorsalis
ENSNLEG00000001598	CASC3	85	79.461	ENSSARG00000010378	CASC3	98	80.135	Sorex_araneus
ENSNLEG00000001598	CASC3	73	54.545	ENSSPAG00000023008	casc3	77	52.318	Stegastes_partitus
ENSNLEG00000001598	CASC3	89	91.214	ENSSSCG00000017477	CASC3	98	91.814	Sus_scrofa
ENSNLEG00000001598	CASC3	75	72.296	ENSTGUG00000002300	CASC3	99	72.571	Taeniopygia_guttata
ENSNLEG00000001598	CASC3	66	97.156	ENSTBEG00000017459	CASC3	67	97.156	Tupaia_belangeri
ENSNLEG00000001598	CASC3	86	82.285	ENSTTRG00000016896	CASC3	98	82.828	Tursiops_truncatus
ENSNLEG00000001598	CASC3	100	93.466	ENSUAMG00000015116	CASC3	100	94.426	Ursus_americanus
ENSNLEG00000001598	CASC3	89	93.291	ENSUMAG00000017697	CASC3	100	93.814	Ursus_maritimus
ENSNLEG00000001598	CASC3	75	93.939	ENSVPAG00000000799	CASC3	75	93.814	Vicugna_pacos
ENSNLEG00000001598	CASC3	100	94.452	ENSVVUG00000000997	CASC3	100	94.452	Vulpes_vulpes
ENSNLEG00000001598	CASC3	89	60.410	ENSXETG00000024395	casc3	98	57.725	Xenopus_tropicalis
ENSNLEG00000001598	CASC3	68	63.690	ENSXMAG00000013937	casc3	77	52.597	Xiphophorus_maculatus