EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000001645 (Gene tree)
Gene ID: 100602531
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 9463 bases
Position: chr12:69019392-69028854
Accession: 100602531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000002025	PRP38	PF03371.15	2.3e-57	1	1
ENSNLEP00000033379	PRP38	PF03371.15	1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000002137	-	3691	XM_003267873	ENSNLEP00000002025	547 (aa)	XP_003267921	G1QM59
ENSNLET00000053371	-	576	-	ENSNLEP00000033379	191 (aa)	-	A0A2I3GPW8

Gene Model

Click here to download ENSNLEG00000001645's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000001645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000001645	-	100	93.053	ENSNLEG00000030268	-	100	92.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000001645	-	100	98.953	ENSG00000134186	PRPF38B	100	99.080	Homo_sapiens
ENSNLEG00000001645	-	100	98.953	ENSANAG00000028333	PRPF38B	100	98.953	Aotus_nancymaae
ENSNLEG00000001645	-	100	94.301	ENSCGRG00001018841	Prpf38b	100	92.532	Cricetulus_griseus_chok1gshd
ENSNLEG00000001645	-	83	92.511	ENSCGRG00000002972	Prpf38b	100	92.291	Cricetulus_griseus_crigri
ENSNLEG00000001645	-	80	93.793	ENSDORG00000025236	-	97	93.587	Dipodomys_ordii
ENSNLEG00000001645	-	75	90.972	ENSEBUG00000001683	-	58	73.134	Eptatretus_burgeri
ENSNLEG00000001645	-	100	95.288	ENSEEUG00000014328	PRPF38B	100	91.590	Erinaceus_europaeus
ENSNLEG00000001645	-	100	95.247	ENSFDAG00000021009	PRPF38B	100	95.247	Fukomys_damarensis
ENSNLEG00000001645	-	100	98.953	ENSGGOG00000011288	PRPF38B	100	98.953	Gorilla_gorilla
ENSNLEG00000001645	-	91	87.550	ENSMGAG00000006188	PRPF38B	100	88.353	Meleagris_gallopavo
ENSNLEG00000001645	-	100	96.335	ENSMAUG00000019131	Prpf38b	100	92.687	Mesocricetus_auratus
ENSNLEG00000001645	-	100	95.812	MGP_CAROLIEiJ_G0025542	Prpf38b	99	95.699	Mus_caroli
ENSNLEG00000001645	-	100	96.335	ENSMUSG00000027881	Prpf38b	99	96.774	Mus_musculus
ENSNLEG00000001645	-	100	96.335	MGP_PahariEiJ_G0026988	Prpf38b	99	96.774	Mus_pahari
ENSNLEG00000001645	-	100	96.335	MGP_SPRETEiJ_G0026492	Prpf38b	99	96.774	Mus_spretus
ENSNLEG00000001645	-	100	98.903	ENSPPAG00000001260	PRPF38B	100	98.903	Pan_paniscus
ENSNLEG00000001645	-	100	97.409	ENSPPRG00000002116	PRPF38B	100	97.409	Panthera_pardus
ENSNLEG00000001645	-	100	98.953	ENSPTRG00000001032	PRPF38B	100	98.953	Pan_troglodytes
ENSNLEG00000001645	-	100	98.953	ENSPANG00000007560	PRPF38B	100	98.953	Papio_anubis
ENSNLEG00000001645	-	100	93.814	ENSPCIG00000024841	PRPF38B	61	95.758	Phascolarctos_cinereus
ENSNLEG00000001645	-	100	96.357	ENSPVAG00000011929	-	100	96.357	Pteropus_vampyrus
ENSNLEG00000001645	-	100	95.471	ENSSARG00000012818	-	100	95.273	Sorex_araneus
ENSNLEG00000001645	-	98	86.842	ENSTGUG00000004594	-	71	88.720	Taeniopygia_guttata
ENSNLEG00000001645	-	100	97.632	ENSUAMG00000023817	PRPF38B	100	97.632	Ursus_americanus