EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000002022 (Gene tree)
Gene ID: 100591012
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 33963 bases
Position: chr4:81639360-81673322
Accession: 100591012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000002855	CPSF_A	PF03178.15	6.7e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000003003	DDB1-201	3420	XM_004087814	ENSNLEP00000002855	1139 (aa)	XP_004087862	G1QPI9

Gene Model

Click here to download ENSNLEG00000002022's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03420	Nucleotide excision repair	KEGG
nle04120	Ubiquitin mediated proteolysis	KEGG
nle05161	Hepatitis B	KEGG
nle05170	Human immunodeficiency virus 1 infection	KEGG
nle05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000002022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000002022	DDB1	100	96.875	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSNLEG00000002022	DDB1	98	88.444	ENSAPOG00000005036	ddb1	99	88.609	Acanthochromis_polyacanthus
ENSNLEG00000002022	DDB1	100	96.788	ENSAMEG00000016518	DDB1	100	96.788	Ailuropoda_melanoleuca
ENSNLEG00000002022	DDB1	86	88.911	ENSACIG00000020624	ddb1	99	88.911	Amphilophus_citrinellus
ENSNLEG00000002022	DDB1	100	88.194	ENSAOCG00000003066	ddb1	100	88.194	Amphiprion_ocellaris
ENSNLEG00000002022	DDB1	100	88.281	ENSAPEG00000000092	ddb1	100	88.281	Amphiprion_percula
ENSNLEG00000002022	DDB1	94	89.269	ENSATEG00000020571	ddb1	97	89.269	Anabas_testudineus
ENSNLEG00000002022	DDB1	98	93.404	ENSAPLG00000007174	DDB1	99	93.404	Anas_platyrhynchos
ENSNLEG00000002022	DDB1	100	93.837	ENSACAG00000017758	DDB1	100	93.837	Anolis_carolinensis
ENSNLEG00000002022	DDB1	100	96.875	ENSANAG00000021878	DDB1	100	96.875	Aotus_nancymaae
ENSNLEG00000002022	DDB1	100	88.542	ENSACLG00000012401	ddb1	100	88.542	Astatotilapia_calliptera
ENSNLEG00000002022	DDB1	100	96.615	ENSBTAG00000021569	DDB1	93	96.615	Bos_taurus
ENSNLEG00000002022	DDB1	100	35.963	WBGene00010890	ddb-1	100	35.878	Caenorhabditis_elegans
ENSNLEG00000002022	DDB1	100	96.875	ENSCJAG00000019319	DDB1	100	96.875	Callithrix_jacchus
ENSNLEG00000002022	DDB1	100	96.788	ENSCAFG00000016264	DDB1	100	96.788	Canis_familiaris
ENSNLEG00000002022	DDB1	95	96.249	ENSCAFG00020012722	DDB1	99	96.249	Canis_lupus_dingo
ENSNLEG00000002022	DDB1	100	96.615	ENSCHIG00000014969	DDB1	100	96.615	Capra_hircus
ENSNLEG00000002022	DDB1	100	96.007	ENSTSYG00000008027	DDB1	100	96.007	Carlito_syrichta
ENSNLEG00000002022	DDB1	98	95.933	ENSCAPG00000010786	DDB1	100	95.933	Cavia_aperea
ENSNLEG00000002022	DDB1	100	96.007	ENSCPOG00000009956	DDB1	100	96.007	Cavia_porcellus
ENSNLEG00000002022	DDB1	100	96.875	ENSCCAG00000035883	DDB1	100	96.875	Cebus_capucinus
ENSNLEG00000002022	DDB1	100	98.169	ENSCATG00000044495	DDB1	100	98.169	Cercocebus_atys
ENSNLEG00000002022	DDB1	100	96.094	ENSCLAG00000004126	DDB1	100	96.094	Chinchilla_lanigera
ENSNLEG00000002022	DDB1	100	96.875	ENSCSAG00000006392	DDB1	100	96.875	Chlorocebus_sabaeus
ENSNLEG00000002022	DDB1	88	91.856	ENSCHOG00000011377	DDB1	90	91.856	Choloepus_hoffmanni
ENSNLEG00000002022	DDB1	100	94.531	ENSCPBG00000017728	DDB1	100	94.531	Chrysemys_picta_bellii
ENSNLEG00000002022	DDB1	100	59.845	ENSCING00000007437	-	100	59.759	Ciona_intestinalis
ENSNLEG00000002022	DDB1	94	58.303	ENSCSAVG00000004783	-	100	58.303	Ciona_savignyi
ENSNLEG00000002022	DDB1	100	98.344	ENSCANG00000019948	DDB1	100	98.344	Colobus_angolensis_palliatus
ENSNLEG00000002022	DDB1	100	96.701	ENSCGRG00001016599	Ddb1	100	96.701	Cricetulus_griseus_chok1gshd
ENSNLEG00000002022	DDB1	100	96.701	ENSCGRG00000013427	Ddb1	100	96.701	Cricetulus_griseus_crigri
ENSNLEG00000002022	DDB1	94	88.537	ENSCSEG00000012499	ddb1	99	86.800	Cynoglossus_semilaevis
ENSNLEG00000002022	DDB1	94	88.807	ENSCVAG00000019531	ddb1	99	88.807	Cyprinodon_variegatus
ENSNLEG00000002022	DDB1	100	85.442	ENSDARG00000074431	ddb1	100	85.566	Danio_rerio
ENSNLEG00000002022	DDB1	94	96.670	ENSDNOG00000014884	DDB1	97	96.670	Dasypus_novemcinctus
ENSNLEG00000002022	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSNLEG00000002022	DDB1	100	58.930	FBgn0260962	pic	100	58.722	Drosophila_melanogaster
ENSNLEG00000002022	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSNLEG00000002022	DDB1	78	81.798	ENSEBUG00000014593	ddb1	97	81.798	Eptatretus_burgeri
ENSNLEG00000002022	DDB1	100	96.615	ENSEASG00005008184	DDB1	100	96.615	Equus_asinus_asinus
ENSNLEG00000002022	DDB1	100	96.528	ENSECAG00000012136	DDB1	100	96.528	Equus_caballus
ENSNLEG00000002022	DDB1	84	97.475	ENSEEUG00000003194	DDB1	85	97.475	Erinaceus_europaeus
ENSNLEG00000002022	DDB1	100	88.281	ENSELUG00000023868	ddb1	100	88.281	Esox_lucius
ENSNLEG00000002022	DDB1	100	96.788	ENSFCAG00000029716	DDB1	100	96.788	Felis_catus
ENSNLEG00000002022	DDB1	100	93.853	ENSFALG00000011981	DDB1	100	93.853	Ficedula_albicollis
ENSNLEG00000002022	DDB1	100	96.007	ENSFDAG00000005128	DDB1	100	96.007	Fukomys_damarensis
ENSNLEG00000002022	DDB1	90	92.400	ENSFHEG00000022133	ddb1	98	92.400	Fundulus_heteroclitus
ENSNLEG00000002022	DDB1	77	90.345	ENSGMOG00000019386	ddb1	93	90.345	Gadus_morhua
ENSNLEG00000002022	DDB1	100	93.924	ENSGALG00000042333	DDB1	100	93.924	Gallus_gallus
ENSNLEG00000002022	DDB1	94	88.622	ENSGAFG00000013142	ddb1	99	88.622	Gambusia_affinis
ENSNLEG00000002022	DDB1	96	87.670	ENSGACG00000017182	ddb1	100	87.670	Gasterosteus_aculeatus
ENSNLEG00000002022	DDB1	95	94.434	ENSGAGG00000014124	DDB1	100	94.434	Gopherus_agassizii
ENSNLEG00000002022	DDB1	100	98.779	ENSGGOG00000004052	DDB1	100	98.779	Gorilla_gorilla
ENSNLEG00000002022	DDB1	100	88.542	ENSHBUG00000008873	ddb1	100	88.542	Haplochromis_burtoni
ENSNLEG00000002022	DDB1	100	95.920	ENSHGLG00000018430	DDB1	100	95.920	Heterocephalus_glaber_female
ENSNLEG00000002022	DDB1	100	94.878	ENSHGLG00100014475	DDB1	100	94.878	Heterocephalus_glaber_male
ENSNLEG00000002022	DDB1	94	88.622	ENSHCOG00000018670	ddb1	98	88.622	Hippocampus_comes
ENSNLEG00000002022	DDB1	100	87.587	ENSIPUG00000005612	DDB1	100	87.587	Ictalurus_punctatus
ENSNLEG00000002022	DDB1	100	96.701	ENSSTOG00000007552	DDB1	100	96.701	Ictidomys_tridecemlineatus
ENSNLEG00000002022	DDB1	100	96.528	ENSJJAG00000017769	Ddb1	100	96.528	Jaculus_jaculus
ENSNLEG00000002022	DDB1	94	88.807	ENSKMAG00000002315	ddb1	99	88.807	Kryptolebias_marmoratus
ENSNLEG00000002022	DDB1	85	88.536	ENSLBEG00000017065	ddb1	99	88.536	Labrus_bergylta
ENSNLEG00000002022	DDB1	100	90.728	ENSLACG00000017611	DDB1	100	90.728	Latimeria_chalumnae
ENSNLEG00000002022	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSNLEG00000002022	DDB1	100	96.528	ENSLAFG00000011513	DDB1	100	96.528	Loxodonta_africana
ENSNLEG00000002022	DDB1	100	98.692	ENSMFAG00000042035	DDB1	100	98.692	Macaca_fascicularis
ENSNLEG00000002022	DDB1	99	96.850	ENSMMUG00000002691	DDB1	99	96.850	Macaca_mulatta
ENSNLEG00000002022	DDB1	100	98.692	ENSMNEG00000031559	DDB1	100	98.692	Macaca_nemestrina
ENSNLEG00000002022	DDB1	100	98.692	ENSMLEG00000044136	DDB1	100	98.692	Mandrillus_leucophaeus
ENSNLEG00000002022	DDB1	100	88.542	ENSMAMG00000014372	ddb1	100	88.542	Mastacembelus_armatus
ENSNLEG00000002022	DDB1	100	88.542	ENSMZEG00005013835	ddb1	100	88.542	Maylandia_zebra
ENSNLEG00000002022	DDB1	94	93.186	ENSMGAG00000004990	DDB1	100	93.186	Meleagris_gallopavo
ENSNLEG00000002022	DDB1	100	96.701	ENSMAUG00000012926	Ddb1	100	96.701	Mesocricetus_auratus
ENSNLEG00000002022	DDB1	100	96.701	ENSMICG00000013703	DDB1	100	96.701	Microcebus_murinus
ENSNLEG00000002022	DDB1	100	96.441	ENSMOCG00000020499	Ddb1	100	96.441	Microtus_ochrogaster
ENSNLEG00000002022	DDB1	86	88.911	ENSMMOG00000001758	ddb1	99	88.911	Mola_mola
ENSNLEG00000002022	DDB1	100	86.301	ENSMODG00000020353	DDB1	100	86.301	Monodelphis_domestica
ENSNLEG00000002022	DDB1	100	88.542	ENSMALG00000014071	ddb1	100	88.542	Monopterus_albus
ENSNLEG00000002022	DDB1	100	96.615	MGP_CAROLIEiJ_G0022695	Ddb1	100	96.615	Mus_caroli
ENSNLEG00000002022	DDB1	100	96.528	ENSMUSG00000024740	Ddb1	100	96.528	Mus_musculus
ENSNLEG00000002022	DDB1	100	96.615	MGP_PahariEiJ_G0014189	Ddb1	100	96.615	Mus_pahari
ENSNLEG00000002022	DDB1	100	96.615	MGP_SPRETEiJ_G0023609	Ddb1	100	96.615	Mus_spretus
ENSNLEG00000002022	DDB1	100	93.490	ENSMPUG00000014200	DDB1	100	93.490	Mustela_putorius_furo
ENSNLEG00000002022	DDB1	100	96.181	ENSMLUG00000013232	DDB1	100	96.181	Myotis_lucifugus
ENSNLEG00000002022	DDB1	100	96.267	ENSNGAG00000009384	Ddb1	100	96.267	Nannospalax_galili
ENSNLEG00000002022	DDB1	100	88.628	ENSNBRG00000019581	ddb1	100	88.628	Neolamprologus_brichardi
ENSNLEG00000002022	DDB1	90	97.887	ENSMEUG00000001099	DDB1	92	97.887	Notamacropus_eugenii
ENSNLEG00000002022	DDB1	90	87.632	ENSOPRG00000008254	DDB1	90	87.632	Ochotona_princeps
ENSNLEG00000002022	DDB1	100	95.920	ENSODEG00000002419	DDB1	100	95.920	Octodon_degus
ENSNLEG00000002022	DDB1	100	88.542	ENSONIG00000005804	ddb1	100	88.542	Oreochromis_niloticus
ENSNLEG00000002022	DDB1	91	94.636	ENSOANG00000004897	DDB1	100	94.636	Ornithorhynchus_anatinus
ENSNLEG00000002022	DDB1	100	96.788	ENSOCUG00000001667	DDB1	100	96.788	Oryctolagus_cuniculus
ENSNLEG00000002022	DDB1	94	88.529	ENSORLG00000001399	ddb1	98	88.414	Oryzias_latipes
ENSNLEG00000002022	DDB1	94	88.437	ENSORLG00020001277	ddb1	95	88.437	Oryzias_latipes_hni
ENSNLEG00000002022	DDB1	94	88.529	ENSORLG00015002080	ddb1	98	88.529	Oryzias_latipes_hsok
ENSNLEG00000002022	DDB1	94	88.899	ENSOMEG00000006181	ddb1	97	88.899	Oryzias_melastigma
ENSNLEG00000002022	DDB1	100	96.528	ENSOGAG00000016103	DDB1	100	96.528	Otolemur_garnettii
ENSNLEG00000002022	DDB1	99	96.564	ENSOARG00000011716	DDB1	98	96.564	Ovis_aries
ENSNLEG00000002022	DDB1	100	98.779	ENSPPAG00000035343	DDB1	100	98.779	Pan_paniscus
ENSNLEG00000002022	DDB1	100	96.788	ENSPPRG00000013300	DDB1	100	96.788	Panthera_pardus
ENSNLEG00000002022	DDB1	98	96.729	ENSPTIG00000006909	DDB1	98	96.729	Panthera_tigris_altaica
ENSNLEG00000002022	DDB1	100	98.779	ENSPTRG00000003737	DDB1	100	98.779	Pan_troglodytes
ENSNLEG00000002022	DDB1	100	98.692	ENSPANG00000000242	DDB1	100	98.692	Papio_anubis
ENSNLEG00000002022	DDB1	94	88.807	ENSPKIG00000019213	ddb1	94	88.807	Paramormyrops_kingsleyae
ENSNLEG00000002022	DDB1	98	93.838	ENSPSIG00000013275	DDB1	100	93.838	Pelodiscus_sinensis
ENSNLEG00000002022	DDB1	86	88.508	ENSPMGG00000021179	ddb1	99	88.508	Periophthalmus_magnuspinnatus
ENSNLEG00000002022	DDB1	100	96.701	ENSPEMG00000012241	Ddb1	100	96.701	Peromyscus_maniculatus_bairdii
ENSNLEG00000002022	DDB1	90	83.981	ENSPMAG00000008479	ddb1	100	83.981	Petromyzon_marinus
ENSNLEG00000002022	DDB1	100	95.833	ENSPCIG00000002643	DDB1	100	95.833	Phascolarctos_cinereus
ENSNLEG00000002022	DDB1	100	87.944	ENSPFOG00000002768	ddb1	100	87.944	Poecilia_formosa
ENSNLEG00000002022	DDB1	100	88.010	ENSPLAG00000017227	ddb1	100	88.010	Poecilia_latipinna
ENSNLEG00000002022	DDB1	100	88.010	ENSPMEG00000011398	ddb1	100	88.010	Poecilia_mexicana
ENSNLEG00000002022	DDB1	94	88.807	ENSPREG00000004440	ddb1	97	88.807	Poecilia_reticulata
ENSNLEG00000002022	DDB1	100	92.055	ENSPPYG00000003193	DDB1	100	92.055	Pongo_abelii
ENSNLEG00000002022	DDB1	83	98.657	ENSPCAG00000011040	DDB1	84	98.657	Procavia_capensis
ENSNLEG00000002022	DDB1	100	95.407	ENSPCOG00000015176	DDB1	100	95.407	Propithecus_coquereli
ENSNLEG00000002022	DDB1	100	96.615	ENSPVAG00000003847	DDB1	100	96.615	Pteropus_vampyrus
ENSNLEG00000002022	DDB1	94	88.807	ENSPNAG00000006635	ddb1	97	88.807	Pygocentrus_nattereri
ENSNLEG00000002022	DDB1	100	96.615	ENSRNOG00000020715	Ddb1	100	96.615	Rattus_norvegicus
ENSNLEG00000002022	DDB1	100	96.875	ENSRBIG00000033611	DDB1	100	96.875	Rhinopithecus_bieti
ENSNLEG00000002022	DDB1	100	98.518	ENSRROG00000041407	DDB1	100	98.518	Rhinopithecus_roxellana
ENSNLEG00000002022	DDB1	100	96.788	ENSSBOG00000019775	DDB1	100	96.788	Saimiri_boliviensis_boliviensis
ENSNLEG00000002022	DDB1	94	93.623	ENSSHAG00000011600	DDB1	100	93.623	Sarcophilus_harrisii
ENSNLEG00000002022	DDB1	94	89.084	ENSSFOG00015011151	ddb1	96	89.084	Scleropages_formosus
ENSNLEG00000002022	DDB1	100	88.108	ENSSMAG00000009495	ddb1	100	88.108	Scophthalmus_maximus
ENSNLEG00000002022	DDB1	100	88.368	ENSSDUG00000004642	ddb1	100	88.368	Seriola_dumerili
ENSNLEG00000002022	DDB1	100	88.368	ENSSLDG00000015804	ddb1	100	88.368	Seriola_lalandi_dorsalis
ENSNLEG00000002022	DDB1	71	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSNLEG00000002022	DDB1	100	94.705	ENSSPUG00000019338	DDB1	100	94.705	Sphenodon_punctatus
ENSNLEG00000002022	DDB1	94	89.177	ENSSPAG00000009888	ddb1	99	89.177	Stegastes_partitus
ENSNLEG00000002022	DDB1	100	96.600	ENSSSCG00000013094	DDB1	100	96.600	Sus_scrofa
ENSNLEG00000002022	DDB1	100	94.184	ENSTGUG00000006414	DDB1	100	94.184	Taeniopygia_guttata
ENSNLEG00000002022	DDB1	94	87.697	ENSTRUG00000016682	ddb1	98	87.697	Takifugu_rubripes
ENSNLEG00000002022	DDB1	88	81.755	ENSTNIG00000009565	ddb1	99	81.755	Tetraodon_nigroviridis
ENSNLEG00000002022	DDB1	93	92.149	ENSTTRG00000011055	DDB1	94	92.149	Tursiops_truncatus
ENSNLEG00000002022	DDB1	95	96.249	ENSUAMG00000017793	DDB1	94	96.249	Ursus_americanus
ENSNLEG00000002022	DDB1	95	96.249	ENSUMAG00000011788	DDB1	98	96.249	Ursus_maritimus
ENSNLEG00000002022	DDB1	90	95.098	ENSVPAG00000007963	DDB1	92	95.098	Vicugna_pacos
ENSNLEG00000002022	DDB1	100	96.701	ENSVVUG00000004987	DDB1	100	96.701	Vulpes_vulpes
ENSNLEG00000002022	DDB1	100	90.138	ENSXETG00000008820	ddb1	100	90.138	Xenopus_tropicalis
ENSNLEG00000002022	DDB1	86	88.306	ENSXCOG00000013956	ddb1	99	88.306	Xiphophorus_couchianus
ENSNLEG00000002022	DDB1	94	88.622	ENSXMAG00000000022	ddb1	99	88.622	Xiphophorus_maculatus