EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNLEG00000002156 (Gene tree)
Gene ID
100601715
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Nomascus_leucogenys
Status
putative
Strand
Minus strand
Length
13550 bases
Position
chr16:98912794-98926343
Accession
100601715
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNLEP00000002788RRM_1PF00076.222.5e-4312
ENSNLEP00000002788RRM_1PF00076.222.5e-4322
ENSNLEP00000045366RRM_1PF00076.222.6e-4312
ENSNLEP00000045366RRM_1PF00076.222.6e-4322
ENSNLEP00000039388RRM_1PF00076.222.8e-4312
ENSNLEP00000039388RRM_1PF00076.222.8e-4322
ENSNLEP00000044735RRM_1PF00076.223e-4312
ENSNLEP00000044735RRM_1PF00076.223e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNLET00000053022PUF60-2012573XM_004090825ENSNLEP00000044735559 (aa)XP_004090873A0A2I3HMJ8
ENSNLET00000044897PUF60-2041593XM_004090827ENSNLEP00000039388530 (aa)XP_004090875A0A2I3H6W8
ENSNLET00000002935PUF60-2031762XM_003280772ENSNLEP00000002788513 (aa)XP_003280820G1QPC2
ENSNLET00000034858PUF60-2022522XM_004090826ENSNLEP00000045366542 (aa)XP_004090874A0A2I3HPG1
Gene Model
Click here to download ENSNLEG00000002156's gene model file
Pathways
Pathway IDPathway NameSource
nle03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000002156's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNLEG00000002156PUF605236.000ENSNLEG00000010562U2AF28337.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNLEG00000002156PUF60100100.000ENSG00000179950PUF60100100.000Homo_sapiens
ENSNLEG00000002156PUF609885.389ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSNLEG00000002156PUF609996.953ENSAMEG00000006406PUF609996.953Ailuropoda_melanoleuca
ENSNLEG00000002156PUF609785.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSNLEG00000002156PUF609777.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSNLEG00000002156PUF609885.389ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSNLEG00000002156PUF609980.791ENSAOCG00000015558-9981.749Amphiprion_ocellaris
ENSNLEG00000002156PUF609775.198ENSAPEG00000001836-9976.471Amphiprion_percula
ENSNLEG00000002156PUF609882.549ENSAPEG00000011923puf60b9982.583Amphiprion_percula
ENSNLEG00000002156PUF609980.566ENSATEG00000006303-9981.333Anabas_testudineus
ENSNLEG00000002156PUF609885.199ENSATEG00000001730puf60b9985.227Anabas_testudineus
ENSNLEG00000002156PUF609898.084ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSNLEG00000002156PUF609995.644ENSACAG00000001645PUF609895.644Anolis_carolinensis
ENSNLEG00000002156PUF6010099.610ENSANAG00000018626PUF6010099.612Aotus_nancymaae
ENSNLEG00000002156PUF609785.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSNLEG00000002156PUF609776.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSNLEG00000002156PUF609885.127ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSNLEG00000002156PUF6010098.754ENSBTAG00000037493PUF6010098.754Bos_taurus
ENSNLEG00000002156PUF607952.055WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSNLEG00000002156PUF6010098.936ENSCJAG00000021485PUF6010098.936Callithrix_jacchus
ENSNLEG00000002156PUF6010099.448ENSCAFG00000001400PUF6010099.448Canis_familiaris
ENSNLEG00000002156PUF6010099.464ENSCAFG00020018754PUF6010099.464Canis_lupus_dingo
ENSNLEG00000002156PUF609999.093ENSCHIG00000001618PUF609299.093Capra_hircus
ENSNLEG00000002156PUF6010098.582ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSNLEG00000002156PUF609992.844ENSCPOG00000014613PUF609993.023Cavia_porcellus
ENSNLEG00000002156PUF6010098.934ENSCCAG00000007744PUF6010098.934Cebus_capucinus
ENSNLEG00000002156PUF60100100.000ENSCATG00000035405PUF60100100.000Cercocebus_atys
ENSNLEG00000002156PUF6010098.582ENSCLAG00000009154PUF6010098.582Chinchilla_lanigera
ENSNLEG00000002156PUF6097100.000ENSCSAG00000008878PUF60100100.000Chlorocebus_sabaeus
ENSNLEG00000002156PUF609997.529ENSCPBG00000005595PUF609997.529Chrysemys_picta_bellii
ENSNLEG00000002156PUF606163.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSNLEG00000002156PUF6010048.803ENSCING00000008436-10049.156Ciona_intestinalis
ENSNLEG00000002156PUF609550.205ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSNLEG00000002156PUF609555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSNLEG00000002156PUF6080100.000ENSCANG00000041843PUF60100100.000Colobus_angolensis_palliatus
ENSNLEG00000002156PUF6010097.872ENSCGRG00001017442Puf6010097.872Cricetulus_griseus_chok1gshd
ENSNLEG00000002156PUF609898.659ENSCGRG00000003717Puf609997.302Cricetulus_griseus_crigri
ENSNLEG00000002156PUF609884.630ENSCSEG00000019887puf60b9384.440Cynoglossus_semilaevis
ENSNLEG00000002156PUF609973.796ENSCSEG00000014845-9175.915Cynoglossus_semilaevis
ENSNLEG00000002156PUF608979.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSNLEG00000002156PUF609784.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSNLEG00000002156PUF609778.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSNLEG00000002156PUF609787.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSNLEG00000002156PUF609981.622ENSDNOG00000043278PUF609881.622Dasypus_novemcinctus
ENSNLEG00000002156PUF609999.274ENSDORG00000004585Puf6010099.274Dipodomys_ordii
ENSNLEG00000002156PUF609550.796FBgn0028577hfp9949.644Drosophila_melanogaster
ENSNLEG00000002156PUF609572.279ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSNLEG00000002156PUF609862.803ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSNLEG00000002156PUF6010099.464ENSEASG00005009695PUF6010099.464Equus_asinus_asinus
ENSNLEG00000002156PUF6010098.679ENSECAG00000024681PUF609999.277Equus_caballus
ENSNLEG00000002156PUF609984.428ENSELUG00000018443-9985.602Esox_lucius
ENSNLEG00000002156PUF609982.830ENSELUG00000006507puf60b9980.220Esox_lucius
ENSNLEG00000002156PUF6010098.404ENSFCAG00000001045PUF6010099.225Felis_catus
ENSNLEG00000002156PUF609985.305ENSFALG00000001136PUF609986.476Ficedula_albicollis
ENSNLEG00000002156PUF6010098.227ENSFDAG00000017177PUF6010098.227Fukomys_damarensis
ENSNLEG00000002156PUF609884.061ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSNLEG00000002156PUF609379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSNLEG00000002156PUF609871.429ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSNLEG00000002156PUF606597.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSNLEG00000002156PUF609883.302ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSNLEG00000002156PUF609779.441ENSGAFG00000004334-9978.842Gambusia_affinis
ENSNLEG00000002156PUF609969.639ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSNLEG00000002156PUF609972.846ENSGACG00000004717puf60b9972.180Gasterosteus_aculeatus
ENSNLEG00000002156PUF609997.652ENSGAGG00000013289PUF609397.652Gopherus_agassizii
ENSNLEG00000002156PUF60100100.000ENSGGOG00000004646PUF60100100.000Gorilla_gorilla
ENSNLEG00000002156PUF609884.630ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSNLEG00000002156PUF609981.203ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSNLEG00000002156PUF6010098.227ENSHGLG00000006111PUF6010098.227Heterocephalus_glaber_female
ENSNLEG00000002156PUF6010098.227ENSHGLG00100012362PUF6010098.227Heterocephalus_glaber_male
ENSNLEG00000002156PUF609881.952ENSHCOG00000015541puf60b10081.550Hippocampus_comes
ENSNLEG00000002156PUF609666.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSNLEG00000002156PUF609882.031ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSNLEG00000002156PUF609778.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSNLEG00000002156PUF6010099.284ENSSTOG00000025037PUF6010099.284Ictidomys_tridecemlineatus
ENSNLEG00000002156PUF6010098.577ENSJJAG00000001076Puf6010098.577Jaculus_jaculus
ENSNLEG00000002156PUF609778.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSNLEG00000002156PUF609784.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSNLEG00000002156PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSNLEG00000002156PUF607190.984ENSLACG00000005456PUF6010090.710Latimeria_chalumnae
ENSNLEG00000002156PUF609989.962ENSLOCG00000010106puf60b9989.354Lepisosteus_oculatus
ENSNLEG00000002156PUF609897.893ENSLAFG00000022929PUF6010096.057Loxodonta_africana
ENSNLEG00000002156PUF60100100.000ENSMFAG00000043373PUF60100100.000Macaca_fascicularis
ENSNLEG00000002156PUF60100100.000ENSMMUG00000013558PUF60100100.000Macaca_mulatta
ENSNLEG00000002156PUF60100100.000ENSMNEG00000031099PUF60100100.000Macaca_nemestrina
ENSNLEG00000002156PUF6097100.000ENSMLEG00000040009PUF60100100.000Mandrillus_leucophaeus
ENSNLEG00000002156PUF609885.009ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSNLEG00000002156PUF609981.955ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSNLEG00000002156PUF609785.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSNLEG00000002156PUF609981.391ENSMZEG00005019425-9981.784Maylandia_zebra
ENSNLEG00000002156PUF609997.905ENSMGAG00000013070PUF609997.905Meleagris_gallopavo
ENSNLEG00000002156PUF6010079.344ENSMAUG00000018549-10079.344Mesocricetus_auratus
ENSNLEG00000002156PUF607297.549ENSMAUG00000014267-10097.549Mesocricetus_auratus
ENSNLEG00000002156PUF6010099.284ENSMICG00000012226PUF6010099.284Microcebus_murinus
ENSNLEG00000002156PUF6010098.050ENSMOCG00000018780Puf6010098.050Microtus_ochrogaster
ENSNLEG00000002156PUF609875.099ENSMMOG00000018059-9976.484Mola_mola
ENSNLEG00000002156PUF609785.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSNLEG00000002156PUF6010097.601ENSMODG00000009161PUF6010097.601Monodelphis_domestica
ENSNLEG00000002156PUF609979.887ENSMALG00000000200-9979.057Monopterus_albus
ENSNLEG00000002156PUF609877.609ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSNLEG00000002156PUF6010097.872MGP_CAROLIEiJ_G0019910Puf6010097.872Mus_caroli
ENSNLEG00000002156PUF6010097.872ENSMUSG00000002524Puf6010097.872Mus_musculus
ENSNLEG00000002156PUF6010097.872MGP_PahariEiJ_G0019920Puf6010097.872Mus_pahari
ENSNLEG00000002156PUF6010097.872MGP_SPRETEiJ_G0020812Puf6010097.872Mus_spretus
ENSNLEG00000002156PUF609998.911ENSMPUG00000008137PUF609798.911Mustela_putorius_furo
ENSNLEG00000002156PUF609998.367ENSMLUG00000000238-9898.367Myotis_lucifugus
ENSNLEG00000002156PUF6010094.542ENSMLUG00000013032-10094.542Myotis_lucifugus
ENSNLEG00000002156PUF6010098.227ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSNLEG00000002156PUF608281.457ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSNLEG00000002156PUF609981.579ENSNBRG00000017223-9981.939Neolamprologus_brichardi
ENSNLEG00000002156PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSNLEG00000002156PUF609573.964ENSODEG00000015513-9971.186Octodon_degus
ENSNLEG00000002156PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSNLEG00000002156PUF609981.579ENSONIG00000014030-9982.008Oreochromis_niloticus
ENSNLEG00000002156PUF609884.630ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSNLEG00000002156PUF609678.016ENSOANG00000006962PUF609978.320Ornithorhynchus_anatinus
ENSNLEG00000002156PUF609884.630ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSNLEG00000002156PUF609778.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSNLEG00000002156PUF609884.630ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSNLEG00000002156PUF609978.131ENSORLG00020018144-9978.236Oryzias_latipes_hni
ENSNLEG00000002156PUF609883.743ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSNLEG00000002156PUF609977.944ENSORLG00015016833-9978.049Oryzias_latipes_hsok
ENSNLEG00000002156PUF609979.135ENSOMEG00000022185-9979.135Oryzias_melastigma
ENSNLEG00000002156PUF609882.156ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSNLEG00000002156PUF609899.425ENSOGAG00000006259PUF609998.387Otolemur_garnettii
ENSNLEG00000002156PUF609896.743ENSOARG00000016235PUF609996.750Ovis_aries
ENSNLEG00000002156PUF60100100.000ENSPPAG00000029933PUF60100100.000Pan_paniscus
ENSNLEG00000002156PUF6010098.404ENSPPRG00000003257PUF6010099.225Panthera_pardus
ENSNLEG00000002156PUF609998.692ENSPTIG00000009795PUF609996.935Panthera_tigris_altaica
ENSNLEG00000002156PUF6010099.821ENSPTRG00000020670PUF6010099.821Pan_troglodytes
ENSNLEG00000002156PUF6010099.811ENSPTRG00000043963-10099.811Pan_troglodytes
ENSNLEG00000002156PUF60100100.000ENSPANG00000021936PUF60100100.000Papio_anubis
ENSNLEG00000002156PUF6010086.074ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSNLEG00000002156PUF609985.338ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSNLEG00000002156PUF609897.893ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSNLEG00000002156PUF609784.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSNLEG00000002156PUF6010098.050ENSPEMG00000008820Puf6010098.050Peromyscus_maniculatus_bairdii
ENSNLEG00000002156PUF609999.044ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSNLEG00000002156PUF609979.623ENSPFOG00000011118-9979.962Poecilia_formosa
ENSNLEG00000002156PUF609884.061ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSNLEG00000002156PUF6010079.143ENSPLAG00000017025-9379.104Poecilia_latipinna
ENSNLEG00000002156PUF609784.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSNLEG00000002156PUF6010079.143ENSPMEG00000009767-9379.478Poecilia_mexicana
ENSNLEG00000002156PUF609884.061ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSNLEG00000002156PUF609782.540ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSNLEG00000002156PUF607998.321ENSPPYG00000018951-9598.321Pongo_abelii
ENSNLEG00000002156PUF607999.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSNLEG00000002156PUF6010099.109ENSPCOG00000027981PUF6010099.109Propithecus_coquereli
ENSNLEG00000002156PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSNLEG00000002156PUF609981.391ENSPNYG00000004273-9981.784Pundamilia_nyererei
ENSNLEG00000002156PUF609785.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSNLEG00000002156PUF609984.630ENSPNAG00000019909puf60a10084.436Pygocentrus_nattereri
ENSNLEG00000002156PUF609880.079ENSPNAG00000019415puf60b9178.794Pygocentrus_nattereri
ENSNLEG00000002156PUF6010097.806ENSRNOG00000009960Puf6010097.806Rattus_norvegicus
ENSNLEG00000002156PUF60100100.000ENSRBIG00000035274PUF60100100.000Rhinopithecus_bieti
ENSNLEG00000002156PUF60100100.000ENSRROG00000029360PUF60100100.000Rhinopithecus_roxellana
ENSNLEG00000002156PUF6010097.547ENSSBOG00000027089PUF609997.547Saimiri_boliviensis_boliviensis
ENSNLEG00000002156PUF609196.844ENSSHAG00000006668PUF609696.844Sarcophilus_harrisii
ENSNLEG00000002156PUF609980.901ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSNLEG00000002156PUF609386.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSNLEG00000002156PUF607391.638ENSSMAG00000016381puf60b7491.638Scophthalmus_maximus
ENSNLEG00000002156PUF609883.271ENSSDUG00000009935puf60b9984.242Seriola_dumerili
ENSNLEG00000002156PUF609979.584ENSSDUG00000007048-9979.962Seriola_dumerili
ENSNLEG00000002156PUF609780.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSNLEG00000002156PUF609985.038ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSNLEG00000002156PUF606486.136ENSSPUG00000013518PUF609485.460Sphenodon_punctatus
ENSNLEG00000002156PUF609781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSNLEG00000002156PUF609882.625ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSNLEG00000002156PUF6010098.830ENSSSCG00000038800PUF6010098.830Sus_scrofa
ENSNLEG00000002156PUF609894.828ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSNLEG00000002156PUF609884.061ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSNLEG00000002156PUF609779.760ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSNLEG00000002156PUF609877.778ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSNLEG00000002156PUF609884.061ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSNLEG00000002156PUF606095.608ENSTBEG00000002751-9995.593Tupaia_belangeri
ENSNLEG00000002156PUF607981.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSNLEG00000002156PUF609798.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSNLEG00000002156PUF6010099.463ENSUAMG00000024917PUF6010099.463Ursus_americanus
ENSNLEG00000002156PUF609894.828ENSUMAG00000000272PUF609994.192Ursus_maritimus
ENSNLEG00000002156PUF609999.457ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSNLEG00000002156PUF609994.071ENSXETG00000012469puf609994.246Xenopus_tropicalis
ENSNLEG00000002156PUF609784.325ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSNLEG00000002156PUF6010082.819ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus
ENSNLEG00000002156PUF609880.276ENSXMAG00000010507-9979.528Xiphophorus_maculatus

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