EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000002322 (Gene tree)
Gene ID: 100582571
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 93660 bases
Position: chr2:381419-475078
Accession: 100582571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000002833	Exo_endo_phos	PF03372.23	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000002980	CNOT6-201	6183	XM_012505096	ENSNLEP00000002833	552 (aa)	XP_012360550	G1QPG7

Gene Model

Click here to download ENSNLEG00000002322's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000002322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000002322	CNOT6	100	79.167	ENSNLEG00000028820	CNOT6L	99	79.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000002322	CNOT6	100	98.564	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSNLEG00000002322	CNOT6	100	85.689	ENSAPOG00000009994	cnot6b	100	85.689	Acanthochromis_polyacanthus
ENSNLEG00000002322	CNOT6	100	96.422	ENSAMEG00000000949	CNOT6	99	96.422	Ailuropoda_melanoleuca
ENSNLEG00000002322	CNOT6	100	85.921	ENSACIG00000016566	cnot6b	100	85.921	Amphilophus_citrinellus
ENSNLEG00000002322	CNOT6	100	85.689	ENSAOCG00000006893	cnot6b	100	85.689	Amphiprion_ocellaris
ENSNLEG00000002322	CNOT6	100	85.689	ENSAPEG00000016949	cnot6b	100	85.689	Amphiprion_percula
ENSNLEG00000002322	CNOT6	100	83.542	ENSATEG00000007862	cnot6b	100	83.542	Anabas_testudineus
ENSNLEG00000002322	CNOT6	100	94.434	ENSAPLG00000012715	CNOT6	99	94.434	Anas_platyrhynchos
ENSNLEG00000002322	CNOT6	100	91.741	ENSACAG00000016548	CNOT6	100	91.741	Anolis_carolinensis
ENSNLEG00000002322	CNOT6	100	97.487	ENSANAG00000030436	CNOT6	96	97.487	Aotus_nancymaae
ENSNLEG00000002322	CNOT6	100	83.900	ENSACLG00000008279	cnot6b	100	84.794	Astatotilapia_calliptera
ENSNLEG00000002322	CNOT6	100	84.229	ENSAMXG00000034694	cnot6b	100	84.229	Astyanax_mexicanus
ENSNLEG00000002322	CNOT6	100	85.637	ENSAMXG00000019140	cnot6a	100	85.637	Astyanax_mexicanus
ENSNLEG00000002322	CNOT6	100	96.050	ENSBTAG00000017362	CNOT6	100	96.050	Bos_taurus
ENSNLEG00000002322	CNOT6	100	97.307	ENSCJAG00000009795	CNOT6	100	97.307	Callithrix_jacchus
ENSNLEG00000002322	CNOT6	100	96.589	ENSCAFG00000000464	CNOT6	100	96.589	Canis_familiaris
ENSNLEG00000002322	CNOT6	100	96.589	ENSCAFG00020002441	CNOT6	100	96.589	Canis_lupus_dingo
ENSNLEG00000002322	CNOT6	100	95.871	ENSCHIG00000019100	CNOT6	100	95.871	Capra_hircus
ENSNLEG00000002322	CNOT6	100	95.153	ENSTSYG00000003982	CNOT6	100	95.153	Carlito_syrichta
ENSNLEG00000002322	CNOT6	100	90.664	ENSCPOG00000035657	CNOT6	100	90.664	Cavia_porcellus
ENSNLEG00000002322	CNOT6	100	93.178	ENSCCAG00000033670	CNOT6	100	93.178	Cebus_capucinus
ENSNLEG00000002322	CNOT6	100	98.205	ENSCATG00000042014	CNOT6	100	98.205	Cercocebus_atys
ENSNLEG00000002322	CNOT6	100	94.255	ENSCLAG00000010489	CNOT6	100	94.255	Chinchilla_lanigera
ENSNLEG00000002322	CNOT6	100	98.205	ENSCSAG00000008165	CNOT6	100	98.205	Chlorocebus_sabaeus
ENSNLEG00000002322	CNOT6	100	94.255	ENSCHOG00000009680	CNOT6	100	94.255	Choloepus_hoffmanni
ENSNLEG00000002322	CNOT6	100	93.896	ENSCPBG00000008908	CNOT6	100	93.896	Chrysemys_picta_bellii
ENSNLEG00000002322	CNOT6	100	98.025	ENSCANG00000026756	CNOT6	100	98.025	Colobus_angolensis_palliatus
ENSNLEG00000002322	CNOT6	100	95.833	ENSCGRG00001011452	Cnot6	100	95.833	Cricetulus_griseus_chok1gshd
ENSNLEG00000002322	CNOT6	100	92.101	ENSCGRG00000010407	Cnot6	100	92.101	Cricetulus_griseus_crigri
ENSNLEG00000002322	CNOT6	100	84.973	ENSCSEG00000010939	cnot6b	100	84.973	Cynoglossus_semilaevis
ENSNLEG00000002322	CNOT6	100	84.409	ENSCVAG00000010538	cnot6b	100	84.409	Cyprinodon_variegatus
ENSNLEG00000002322	CNOT6	100	82.437	ENSDARG00000101072	cnot6b	100	82.437	Danio_rerio
ENSNLEG00000002322	CNOT6	100	85.099	ENSDARG00000008255	cnot6a	100	85.099	Danio_rerio
ENSNLEG00000002322	CNOT6	100	95.691	ENSDNOG00000041644	CNOT6	100	95.691	Dasypus_novemcinctus
ENSNLEG00000002322	CNOT6	100	85.099	ENSDORG00000001708	Cnot6	100	85.099	Dipodomys_ordii
ENSNLEG00000002322	CNOT6	100	76.565	ENSETEG00000006975	CNOT6	100	76.565	Echinops_telfairi
ENSNLEG00000002322	CNOT6	90	92.121	ENSEASG00005012957	-	99	92.121	Equus_asinus_asinus
ENSNLEG00000002322	CNOT6	100	95.691	ENSEASG00005012794	-	100	95.691	Equus_asinus_asinus
ENSNLEG00000002322	CNOT6	100	96.409	ENSECAG00000019325	CNOT6	100	96.409	Equus_caballus
ENSNLEG00000002322	CNOT6	100	91.486	ENSECAG00000012704	-	99	91.486	Equus_caballus
ENSNLEG00000002322	CNOT6	100	95.153	ENSEEUG00000015382	CNOT6	100	95.153	Erinaceus_europaeus
ENSNLEG00000002322	CNOT6	100	81.149	ENSELUG00000024580	cnot6a	100	81.149	Esox_lucius
ENSNLEG00000002322	CNOT6	100	82.363	ENSELUG00000015981	cnot6b	99	82.363	Esox_lucius
ENSNLEG00000002322	CNOT6	100	96.589	ENSFCAG00000001881	CNOT6	100	96.589	Felis_catus
ENSNLEG00000002322	CNOT6	100	94.434	ENSFALG00000007699	CNOT6	100	94.434	Ficedula_albicollis
ENSNLEG00000002322	CNOT6	100	94.075	ENSFDAG00000001999	CNOT6	100	94.075	Fukomys_damarensis
ENSNLEG00000002322	CNOT6	65	88.095	ENSFHEG00000013756	cnot6b	96	88.095	Fundulus_heteroclitus
ENSNLEG00000002322	CNOT6	95	83.932	ENSGMOG00000009767	cnot6b	99	83.932	Gadus_morhua
ENSNLEG00000002322	CNOT6	100	94.434	ENSGALG00000034316	CNOT6	100	94.434	Gallus_gallus
ENSNLEG00000002322	CNOT6	100	84.588	ENSGAFG00000008525	cnot6b	100	84.588	Gambusia_affinis
ENSNLEG00000002322	CNOT6	95	82.042	ENSGACG00000018046	cnot6b	99	82.042	Gasterosteus_aculeatus
ENSNLEG00000002322	CNOT6	100	77.917	ENSGAGG00000012176	CNOT6	100	77.917	Gopherus_agassizii
ENSNLEG00000002322	CNOT6	100	98.564	ENSGGOG00000003675	CNOT6	100	98.564	Gorilla_gorilla
ENSNLEG00000002322	CNOT6	100	84.079	ENSHBUG00000002819	cnot6b	100	84.973	Haplochromis_burtoni
ENSNLEG00000002322	CNOT6	100	94.434	ENSHGLG00000017756	CNOT6	100	94.434	Heterocephalus_glaber_female
ENSNLEG00000002322	CNOT6	100	94.434	ENSHGLG00100005747	CNOT6	100	94.434	Heterocephalus_glaber_male
ENSNLEG00000002322	CNOT6	100	83.935	ENSHCOG00000016176	cnot6b	100	84.838	Hippocampus_comes
ENSNLEG00000002322	CNOT6	100	84.740	ENSIPUG00000019831	cnot6a	100	84.740	Ictalurus_punctatus
ENSNLEG00000002322	CNOT6	100	83.333	ENSIPUG00000017482	cnot6b	100	83.333	Ictalurus_punctatus
ENSNLEG00000002322	CNOT6	100	96.050	ENSSTOG00000002803	CNOT6	100	96.050	Ictidomys_tridecemlineatus
ENSNLEG00000002322	CNOT6	100	94.434	ENSJJAG00000012296	Cnot6	100	94.434	Jaculus_jaculus
ENSNLEG00000002322	CNOT6	100	85.484	ENSKMAG00000004640	cnot6b	100	85.484	Kryptolebias_marmoratus
ENSNLEG00000002322	CNOT6	100	82.826	ENSLBEG00000027917	cnot6b	100	83.721	Labrus_bergylta
ENSNLEG00000002322	CNOT6	100	88.710	ENSLOCG00000010102	cnot6b	99	88.710	Lepisosteus_oculatus
ENSNLEG00000002322	CNOT6	100	96.050	ENSLAFG00000016742	CNOT6	100	96.050	Loxodonta_africana
ENSNLEG00000002322	CNOT6	100	98.205	ENSMFAG00000030867	CNOT6	100	98.205	Macaca_fascicularis
ENSNLEG00000002322	CNOT6	100	98.205	ENSMMUG00000018690	CNOT6	100	98.205	Macaca_mulatta
ENSNLEG00000002322	CNOT6	100	98.205	ENSMNEG00000038565	CNOT6	100	98.205	Macaca_nemestrina
ENSNLEG00000002322	CNOT6	100	98.205	ENSMLEG00000010555	CNOT6	100	98.205	Mandrillus_leucophaeus
ENSNLEG00000002322	CNOT6	100	85.868	ENSMAMG00000007515	cnot6b	100	85.868	Mastacembelus_armatus
ENSNLEG00000002322	CNOT6	100	83.900	ENSMZEG00005012899	cnot6b	100	84.794	Maylandia_zebra
ENSNLEG00000002322	CNOT6	100	94.794	ENSMAUG00000019798	Cnot6	100	94.794	Mesocricetus_auratus
ENSNLEG00000002322	CNOT6	100	94.794	ENSMICG00000013018	-	100	94.794	Microcebus_murinus
ENSNLEG00000002322	CNOT6	98	86.827	ENSMICG00000028378	-	99	86.827	Microcebus_murinus
ENSNLEG00000002322	CNOT6	100	94.614	ENSMOCG00000021662	Cnot6	100	94.614	Microtus_ochrogaster
ENSNLEG00000002322	CNOT6	100	84.268	ENSMMOG00000003227	cnot6b	100	84.268	Mola_mola
ENSNLEG00000002322	CNOT6	100	95.512	ENSMODG00000003979	CNOT6	100	95.512	Monodelphis_domestica
ENSNLEG00000002322	CNOT6	100	85.689	ENSMALG00000014251	cnot6b	100	85.689	Monopterus_albus
ENSNLEG00000002322	CNOT6	100	95.833	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.833	Mus_caroli
ENSNLEG00000002322	CNOT6	100	95.833	ENSMUSG00000020362	Cnot6	100	95.833	Mus_musculus
ENSNLEG00000002322	CNOT6	100	95.833	MGP_PahariEiJ_G0017413	Cnot6	100	95.833	Mus_pahari
ENSNLEG00000002322	CNOT6	100	95.652	MGP_SPRETEiJ_G0017122	Cnot6	100	95.652	Mus_spretus
ENSNLEG00000002322	CNOT6	100	96.409	ENSMPUG00000000587	CNOT6	96	96.409	Mustela_putorius_furo
ENSNLEG00000002322	CNOT6	100	93.772	ENSMLUG00000010257	CNOT6	100	93.772	Myotis_lucifugus
ENSNLEG00000002322	CNOT6	100	93.537	ENSNGAG00000008269	Cnot6	100	93.537	Nannospalax_galili
ENSNLEG00000002322	CNOT6	100	84.079	ENSNBRG00000010798	cnot6b	100	84.973	Neolamprologus_brichardi
ENSNLEG00000002322	CNOT6	81	95.794	ENSMEUG00000000025	CNOT6	81	95.794	Notamacropus_eugenii
ENSNLEG00000002322	CNOT6	88	94.286	ENSOPRG00000008244	-	88	94.286	Ochotona_princeps
ENSNLEG00000002322	CNOT6	100	93.357	ENSODEG00000007041	CNOT6	100	93.357	Octodon_degus
ENSNLEG00000002322	CNOT6	75	84.634	ENSONIG00000013027	cnot6b	99	84.634	Oreochromis_niloticus
ENSNLEG00000002322	CNOT6	100	93.716	ENSOANG00000010226	CNOT6	100	93.716	Ornithorhynchus_anatinus
ENSNLEG00000002322	CNOT6	100	95.528	ENSOCUG00000011083	CNOT6	100	95.528	Oryctolagus_cuniculus
ENSNLEG00000002322	CNOT6	100	84.079	ENSORLG00000005059	cnot6b	100	84.079	Oryzias_latipes
ENSNLEG00000002322	CNOT6	100	84.079	ENSORLG00020012784	cnot6b	100	84.079	Oryzias_latipes_hni
ENSNLEG00000002322	CNOT6	93	83.174	ENSORLG00015022658	cnot6b	98	83.174	Oryzias_latipes_hsok
ENSNLEG00000002322	CNOT6	100	84.258	ENSOMEG00000005295	cnot6b	100	84.258	Oryzias_melastigma
ENSNLEG00000002322	CNOT6	94	95.802	ENSOGAG00000032470	CNOT6	100	95.802	Otolemur_garnettii
ENSNLEG00000002322	CNOT6	97	95.572	ENSOARG00000001003	CNOT6	100	95.572	Ovis_aries
ENSNLEG00000002322	CNOT6	100	98.564	ENSPPAG00000032253	CNOT6	100	98.564	Pan_paniscus
ENSNLEG00000002322	CNOT6	100	96.409	ENSPPRG00000011912	CNOT6	100	96.409	Panthera_pardus
ENSNLEG00000002322	CNOT6	100	96.409	ENSPTIG00000016794	CNOT6	100	96.409	Panthera_tigris_altaica
ENSNLEG00000002322	CNOT6	100	99.638	ENSPTRG00000017636	CNOT6	100	99.638	Pan_troglodytes
ENSNLEG00000002322	CNOT6	100	98.205	ENSPANG00000016191	CNOT6	100	98.205	Papio_anubis
ENSNLEG00000002322	CNOT6	100	85.484	ENSPKIG00000021368	cnot6b	100	85.484	Paramormyrops_kingsleyae
ENSNLEG00000002322	CNOT6	98	94.301	ENSPSIG00000017307	CNOT6	100	94.301	Pelodiscus_sinensis
ENSNLEG00000002322	CNOT6	100	85.740	ENSPMGG00000011238	cnot6b	100	85.740	Periophthalmus_magnuspinnatus
ENSNLEG00000002322	CNOT6	100	94.075	ENSPEMG00000000627	Cnot6	100	94.075	Peromyscus_maniculatus_bairdii
ENSNLEG00000002322	CNOT6	100	94.973	ENSPCIG00000020319	CNOT6	99	94.973	Phascolarctos_cinereus
ENSNLEG00000002322	CNOT6	100	84.409	ENSPFOG00000006291	cnot6b	100	84.409	Poecilia_formosa
ENSNLEG00000002322	CNOT6	100	81.736	ENSPLAG00000008266	cnot6b	100	81.736	Poecilia_latipinna
ENSNLEG00000002322	CNOT6	100	84.588	ENSPMEG00000009091	cnot6b	100	84.588	Poecilia_mexicana
ENSNLEG00000002322	CNOT6	100	84.629	ENSPREG00000003713	cnot6b	100	84.629	Poecilia_reticulata
ENSNLEG00000002322	CNOT6	100	98.564	ENSPPYG00000016137	CNOT6	100	98.564	Pongo_abelii
ENSNLEG00000002322	CNOT6	71	95.865	ENSPCAG00000005599	-	71	95.865	Procavia_capensis
ENSNLEG00000002322	CNOT6	100	90.664	ENSPCOG00000017359	CNOT6	100	91.382	Propithecus_coquereli
ENSNLEG00000002322	CNOT6	100	90.664	ENSPVAG00000003069	CNOT6	100	90.664	Pteropus_vampyrus
ENSNLEG00000002322	CNOT6	100	83.721	ENSPNYG00000000321	cnot6b	100	84.615	Pundamilia_nyererei
ENSNLEG00000002322	CNOT6	100	85.817	ENSPNAG00000029586	cnot6a	100	85.817	Pygocentrus_nattereri
ENSNLEG00000002322	CNOT6	100	84.229	ENSPNAG00000028816	cnot6b	100	84.229	Pygocentrus_nattereri
ENSNLEG00000002322	CNOT6	100	94.075	ENSRNOG00000054891	Cnot6	100	94.075	Rattus_norvegicus
ENSNLEG00000002322	CNOT6	100	98.025	ENSRBIG00000004309	CNOT6	100	98.025	Rhinopithecus_bieti
ENSNLEG00000002322	CNOT6	100	98.025	ENSRROG00000035378	CNOT6	100	98.025	Rhinopithecus_roxellana
ENSNLEG00000002322	CNOT6	100	97.307	ENSSBOG00000030494	CNOT6	100	97.307	Saimiri_boliviensis_boliviensis
ENSNLEG00000002322	CNOT6	100	95.332	ENSSHAG00000017436	CNOT6	100	95.332	Sarcophilus_harrisii
ENSNLEG00000002322	CNOT6	100	84.767	ENSSFOG00015022383	cnot6a	96	84.767	Scleropages_formosus
ENSNLEG00000002322	CNOT6	100	86.918	ENSSFOG00015015133	CNOT6	100	86.918	Scleropages_formosus
ENSNLEG00000002322	CNOT6	100	83.721	ENSSMAG00000003084	cnot6b	100	83.721	Scophthalmus_maximus
ENSNLEG00000002322	CNOT6	100	85.331	ENSSDUG00000004151	cnot6b	100	85.331	Seriola_dumerili
ENSNLEG00000002322	CNOT6	100	84.615	ENSSLDG00000004448	cnot6b	100	85.510	Seriola_lalandi_dorsalis
ENSNLEG00000002322	CNOT6	64	74.581	ENSSARG00000012650	-	100	74.581	Sorex_araneus
ENSNLEG00000002322	CNOT6	100	93.178	ENSSPUG00000007893	CNOT6	100	93.178	Sphenodon_punctatus
ENSNLEG00000002322	CNOT6	100	85.510	ENSSPAG00000000149	cnot6b	100	85.510	Stegastes_partitus
ENSNLEG00000002322	CNOT6	100	96.739	ENSSSCG00000014009	CNOT6	100	96.739	Sus_scrofa
ENSNLEG00000002322	CNOT6	100	94.075	ENSTGUG00000001119	CNOT6	100	94.075	Taeniopygia_guttata
ENSNLEG00000002322	CNOT6	100	82.944	ENSTRUG00000002818	cnot6b	100	82.944	Takifugu_rubripes
ENSNLEG00000002322	CNOT6	100	83.303	ENSTNIG00000004443	cnot6b	99	83.303	Tetraodon_nigroviridis
ENSNLEG00000002322	CNOT6	87	65.298	ENSTBEG00000017094	-	100	65.298	Tupaia_belangeri
ENSNLEG00000002322	CNOT6	100	95.871	ENSTTRG00000009363	CNOT6	100	95.871	Tursiops_truncatus
ENSNLEG00000002322	CNOT6	77	96.037	ENSUAMG00000004579	CNOT6	88	96.037	Ursus_americanus
ENSNLEG00000002322	CNOT6	100	92.466	ENSUMAG00000024577	CNOT6	100	92.466	Ursus_maritimus
ENSNLEG00000002322	CNOT6	83	94.626	ENSVPAG00000003593	CNOT6	83	94.626	Vicugna_pacos
ENSNLEG00000002322	CNOT6	100	96.589	ENSVVUG00000026940	CNOT6	100	96.589	Vulpes_vulpes
ENSNLEG00000002322	CNOT6	100	82.098	ENSXCOG00000003360	cnot6b	100	82.098	Xiphophorus_couchianus
ENSNLEG00000002322	CNOT6	100	84.588	ENSXMAG00000008730	cnot6b	100	84.588	Xiphophorus_maculatus