EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000002447 (Gene tree)
Gene ID: 100599566
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 17884 bases
Position: chr8:75640386-75658269
Accession: 100599566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000024854	Exo_endo_phos	PF03372.23	3.2e-08	1	1
ENSNLEP00000026975	Exo_endo_phos	PF03372.23	4.6e-08	1	1
ENSNLEP00000003065	Exo_endo_phos	PF03372.23	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000003221	TDP2-201	2212	XM_003263566	ENSNLEP00000003065	362 (aa)	XP_003263614	G1QQ47
ENSNLET00000047298	TDP2-203	945	-	ENSNLEP00000024854	314 (aa)	-	A0A2I3FSI0
ENSNLET00000045870	TDP2-202	1068	-	ENSNLEP00000026975	355 (aa)	-	A0A2I3G540

Gene Model

Click here to download ENSNLEG00000002447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000002447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000002447	TDP2	100	98.619	ENSG00000111802	TDP2	100	98.619	Homo_sapiens
ENSNLEG00000002447	TDP2	83	53.208	ENSAPOG00000018379	-	91	53.208	Acanthochromis_polyacanthus
ENSNLEG00000002447	TDP2	89	87.097	ENSAMEG00000010230	TDP2	99	87.097	Ailuropoda_melanoleuca
ENSNLEG00000002447	TDP2	58	52.717	ENSAOCG00000010081	-	81	52.717	Amphiprion_ocellaris
ENSNLEG00000002447	TDP2	81	52.734	ENSAPEG00000004208	-	91	52.734	Amphiprion_percula
ENSNLEG00000002447	TDP2	86	47.445	ENSATEG00000010663	-	89	47.445	Anabas_testudineus
ENSNLEG00000002447	TDP2	100	62.602	ENSACAG00000002332	TDP2	100	62.602	Anolis_carolinensis
ENSNLEG00000002447	TDP2	100	91.713	ENSANAG00000020033	TDP2	100	91.713	Aotus_nancymaae
ENSNLEG00000002447	TDP2	89	48.399	ENSACLG00000016132	tdp2b	95	48.582	Astatotilapia_calliptera
ENSNLEG00000002447	TDP2	94	48.485	ENSACLG00000016174	tdp2b	97	48.485	Astatotilapia_calliptera
ENSNLEG00000002447	TDP2	85	53.333	ENSACLG00000016148	tdp2b	95	53.333	Astatotilapia_calliptera
ENSNLEG00000002447	TDP2	97	51.058	ENSAMXG00000011775	tdp2b	99	51.058	Astyanax_mexicanus
ENSNLEG00000002447	TDP2	88	49.117	ENSAMXG00000036549	tdp2a	92	49.117	Astyanax_mexicanus
ENSNLEG00000002447	TDP2	100	84.890	ENSBTAG00000000365	TDP2	97	85.552	Bos_taurus
ENSNLEG00000002447	TDP2	91	30.699	WBGene00013405	tdpt-1	85	30.699	Caenorhabditis_elegans
ENSNLEG00000002447	TDP2	100	91.713	ENSCJAG00000006074	TDP2	100	91.713	Callithrix_jacchus
ENSNLEG00000002447	TDP2	100	90.331	ENSCJAG00000021963	-	100	90.331	Callithrix_jacchus
ENSNLEG00000002447	TDP2	100	82.535	ENSCAFG00000010428	TDP2	100	86.257	Canis_familiaris
ENSNLEG00000002447	TDP2	89	88.889	ENSCAFG00020009994	TDP2	96	88.889	Canis_lupus_dingo
ENSNLEG00000002447	TDP2	89	88.612	ENSCHIG00000015294	-	95	88.612	Capra_hircus
ENSNLEG00000002447	TDP2	89	90.647	ENSTSYG00000037199	TDP2	100	89.320	Carlito_syrichta
ENSNLEG00000002447	TDP2	100	86.188	ENSCPOG00000006390	TDP2	100	85.912	Cavia_porcellus
ENSNLEG00000002447	TDP2	100	93.923	ENSCCAG00000022734	TDP2	100	93.923	Cebus_capucinus
ENSNLEG00000002447	TDP2	100	96.133	ENSCATG00000022076	TDP2	100	96.053	Cercocebus_atys
ENSNLEG00000002447	TDP2	100	85.475	ENSCLAG00000002072	TDP2	100	85.475	Chinchilla_lanigera
ENSNLEG00000002447	TDP2	100	95.810	ENSCSAG00000007769	TDP2	100	95.810	Chlorocebus_sabaeus
ENSNLEG00000002447	TDP2	97	68.805	ENSCPBG00000006551	TDP2	88	68.391	Chrysemys_picta_bellii
ENSNLEG00000002447	TDP2	100	95.580	ENSCANG00000040122	TDP2	100	95.724	Colobus_angolensis_palliatus
ENSNLEG00000002447	TDP2	96	70.088	ENSCGRG00001000384	Tdp2	92	70.088	Cricetulus_griseus_chok1gshd
ENSNLEG00000002447	TDP2	89	74.820	ENSCGRG00000010250	Tdp2	94	68.035	Cricetulus_griseus_crigri
ENSNLEG00000002447	TDP2	95	53.714	ENSCVAG00000003114	tdp2b	95	53.143	Cyprinodon_variegatus
ENSNLEG00000002447	TDP2	94	51.923	ENSDARG00000035954	tdp2b	94	51.923	Danio_rerio
ENSNLEG00000002447	TDP2	82	48.077	ENSDARG00000069941	tdp2a	58	48.077	Danio_rerio
ENSNLEG00000002447	TDP2	100	85.359	ENSDNOG00000044082	TDP2	94	87.500	Dasypus_novemcinctus
ENSNLEG00000002447	TDP2	89	86.691	ENSETEG00000019096	TDP2	100	86.691	Echinops_telfairi
ENSNLEG00000002447	TDP2	84	53.008	ENSEBUG00000006535	tdp2a	62	53.008	Eptatretus_burgeri
ENSNLEG00000002447	TDP2	96	87.390	ENSEASG00005007656	TDP2	95	87.500	Equus_asinus_asinus
ENSNLEG00000002447	TDP2	96	87.390	ENSECAG00000014264	TDP2	95	87.500	Equus_caballus
ENSNLEG00000002447	TDP2	100	80.663	ENSEEUG00000010776	TDP2	95	82.319	Erinaceus_europaeus
ENSNLEG00000002447	TDP2	88	46.786	ENSELUG00000009321	tdp2a	94	46.000	Esox_lucius
ENSNLEG00000002447	TDP2	94	53.039	ENSELUG00000016449	tdp2b	95	53.039	Esox_lucius
ENSNLEG00000002447	TDP2	100	84.807	ENSFCAG00000025612	TDP2	98	85.269	Felis_catus
ENSNLEG00000002447	TDP2	96	58.944	ENSFALG00000004710	TDP2	94	59.064	Ficedula_albicollis
ENSNLEG00000002447	TDP2	89	88.889	ENSFDAG00000006512	TDP2	97	88.571	Fukomys_damarensis
ENSNLEG00000002447	TDP2	78	51.613	ENSFHEG00000013560	-	84	51.613	Fundulus_heteroclitus
ENSNLEG00000002447	TDP2	96	64.327	ENSGALG00000013637	TDP2	92	64.327	Gallus_gallus
ENSNLEG00000002447	TDP2	97	69.096	ENSGAGG00000002853	TDP2	87	69.208	Gopherus_agassizii
ENSNLEG00000002447	TDP2	100	98.066	ENSGGOG00000014237	TDP2	100	98.066	Gorilla_gorilla
ENSNLEG00000002447	TDP2	95	54.701	ENSHBUG00000002714	tdp2b	95	54.755	Haplochromis_burtoni
ENSNLEG00000002447	TDP2	61	59.686	ENSHBUG00000005421	-	79	59.686	Haplochromis_burtoni
ENSNLEG00000002447	TDP2	100	84.254	ENSHGLG00000008655	TDP2	100	83.287	Heterocephalus_glaber_female
ENSNLEG00000002447	TDP2	100	84.254	ENSHGLG00100019087	TDP2	100	83.287	Heterocephalus_glaber_male
ENSNLEG00000002447	TDP2	94	53.824	ENSIPUG00000013691	tdp2b	94	53.824	Ictalurus_punctatus
ENSNLEG00000002447	TDP2	98	65.449	ENSJJAG00000021685	Tdp2	97	67.456	Jaculus_jaculus
ENSNLEG00000002447	TDP2	82	50.575	ENSKMAG00000015485	-	84	50.575	Kryptolebias_marmoratus
ENSNLEG00000002447	TDP2	96	59.143	ENSLACG00000008852	TDP2	95	59.143	Latimeria_chalumnae
ENSNLEG00000002447	TDP2	88	58.696	ENSLOCG00000005817	tdp2b	98	58.696	Lepisosteus_oculatus
ENSNLEG00000002447	TDP2	96	87.683	ENSLAFG00000002567	TDP2	98	87.791	Loxodonta_africana
ENSNLEG00000002447	TDP2	100	95.856	ENSMFAG00000045296	TDP2	100	96.053	Macaca_fascicularis
ENSNLEG00000002447	TDP2	100	95.856	ENSMMUG00000009803	TDP2	100	95.856	Macaca_mulatta
ENSNLEG00000002447	TDP2	100	95.856	ENSMNEG00000038003	TDP2	100	95.856	Macaca_nemestrina
ENSNLEG00000002447	TDP2	100	95.304	ENSMLEG00000028883	TDP2	100	96.711	Mandrillus_leucophaeus
ENSNLEG00000002447	TDP2	94	54.706	ENSMAMG00000013654	tdp2b	94	54.706	Mastacembelus_armatus
ENSNLEG00000002447	TDP2	80	47.410	ENSMZEG00005003980	-	82	47.244	Maylandia_zebra
ENSNLEG00000002447	TDP2	80	52.778	ENSMZEG00005004055	tdp2b	83	52.778	Maylandia_zebra
ENSNLEG00000002447	TDP2	84	53.008	ENSMZEG00005004153	tdp2b	91	53.008	Maylandia_zebra
ENSNLEG00000002447	TDP2	94	46.465	ENSMZEG00005004103	tdp2b	97	46.465	Maylandia_zebra
ENSNLEG00000002447	TDP2	90	50.175	ENSMZEG00005004077	tdp2b	97	50.175	Maylandia_zebra
ENSNLEG00000002447	TDP2	95	54.179	ENSMZEG00005003950	tdp2b	95	54.179	Maylandia_zebra
ENSNLEG00000002447	TDP2	96	47.682	ENSMZEG00005004126	tdp2b	97	47.682	Maylandia_zebra
ENSNLEG00000002447	TDP2	96	65.396	ENSMGAG00000008014	TDP2	91	65.396	Meleagris_gallopavo
ENSNLEG00000002447	TDP2	96	69.501	ENSMAUG00000014451	Tdp2	92	69.501	Mesocricetus_auratus
ENSNLEG00000002447	TDP2	100	88.705	ENSMICG00000000039	TDP2	100	87.789	Microcebus_murinus
ENSNLEG00000002447	TDP2	96	71.554	ENSMOCG00000002823	Tdp2	95	69.886	Microtus_ochrogaster
ENSNLEG00000002447	TDP2	89	65.231	ENSMODG00000011653	TDP2	99	65.231	Monodelphis_domestica
ENSNLEG00000002447	TDP2	95	47.682	ENSMALG00000005368	-	98	47.682	Monopterus_albus
ENSNLEG00000002447	TDP2	97	68.895	MGP_CAROLIEiJ_G0018354	Tdp2	92	68.895	Mus_caroli
ENSNLEG00000002447	TDP2	96	70.088	ENSMUSG00000035958	Tdp2	92	69.767	Mus_musculus
ENSNLEG00000002447	TDP2	97	67.733	MGP_PahariEiJ_G0019417	Tdp2	92	67.733	Mus_pahari
ENSNLEG00000002447	TDP2	97	69.477	MGP_SPRETEiJ_G0019220	Tdp2	92	69.477	Mus_spretus
ENSNLEG00000002447	TDP2	96	84.548	ENSMPUG00000004516	TDP2	96	84.682	Mustela_putorius_furo
ENSNLEG00000002447	TDP2	99	73.684	ENSMLUG00000013506	TDP2	100	73.684	Myotis_lucifugus
ENSNLEG00000002447	TDP2	99	64.957	ENSNGAG00000001375	Tdp2	95	64.957	Nannospalax_galili
ENSNLEG00000002447	TDP2	97	83.721	ENSOPRG00000016299	TDP2	98	83.721	Ochotona_princeps
ENSNLEG00000002447	TDP2	93	88.356	ENSODEG00000014018	TDP2	99	88.356	Octodon_degus
ENSNLEG00000002447	TDP2	97	86.880	ENSOCUG00000013773	TDP2	95	86.880	Oryctolagus_cuniculus
ENSNLEG00000002447	TDP2	84	48.315	ENSORLG00000001661	-	97	48.315	Oryzias_latipes
ENSNLEG00000002447	TDP2	84	48.315	ENSORLG00020004634	-	97	48.315	Oryzias_latipes_hni
ENSNLEG00000002447	TDP2	84	43.446	ENSORLG00015008190	-	97	43.446	Oryzias_latipes_hsok
ENSNLEG00000002447	TDP2	84	46.792	ENSOMEG00000015899	-	92	49.597	Oryzias_melastigma
ENSNLEG00000002447	TDP2	100	86.188	ENSOGAG00000025303	TDP2	99	85.359	Otolemur_garnettii
ENSNLEG00000002447	TDP2	100	98.066	ENSPPAG00000029023	TDP2	100	98.066	Pan_paniscus
ENSNLEG00000002447	TDP2	100	84.254	ENSPPRG00000015398	TDP2	98	84.703	Panthera_pardus
ENSNLEG00000002447	TDP2	97	82.237	ENSPTIG00000018574	TDP2	95	87.410	Panthera_tigris_altaica
ENSNLEG00000002447	TDP2	100	98.066	ENSPTRG00000017778	TDP2	100	98.066	Pan_troglodytes
ENSNLEG00000002447	TDP2	100	95.856	ENSPANG00000017590	TDP2	100	96.053	Papio_anubis
ENSNLEG00000002447	TDP2	94	51.989	ENSPKIG00000006483	tdp2b	94	51.989	Paramormyrops_kingsleyae
ENSNLEG00000002447	TDP2	91	69.338	ENSPSIG00000004948	TDP2	100	69.625	Pelodiscus_sinensis
ENSNLEG00000002447	TDP2	96	71.261	ENSPEMG00000001788	Tdp2	91	71.261	Peromyscus_maniculatus_bairdii
ENSNLEG00000002447	TDP2	79	47.529	ENSPMAG00000001570	tdp2b	96	47.909	Petromyzon_marinus
ENSNLEG00000002447	TDP2	96	67.742	ENSPCIG00000007316	TDP2	92	66.667	Phascolarctos_cinereus
ENSNLEG00000002447	TDP2	79	50.000	ENSPFOG00000017990	-	90	50.000	Poecilia_formosa
ENSNLEG00000002447	TDP2	79	49.600	ENSPLAG00000019439	-	79	49.600	Poecilia_latipinna
ENSNLEG00000002447	TDP2	79	50.400	ENSPMEG00000010824	-	94	46.181	Poecilia_mexicana
ENSNLEG00000002447	TDP2	100	97.790	ENSPPYG00000016282	TDP2	92	97.790	Pongo_abelii
ENSNLEG00000002447	TDP2	100	90.331	ENSPCOG00000021415	TDP2	100	90.331	Propithecus_coquereli
ENSNLEG00000002447	TDP2	84	49.291	ENSPNYG00000011504	tdp2b	90	49.291	Pundamilia_nyererei
ENSNLEG00000002447	TDP2	67	49.282	ENSPNYG00000001944	-	83	49.282	Pundamilia_nyererei
ENSNLEG00000002447	TDP2	95	53.026	ENSPNYG00000011532	tdp2b	95	53.026	Pundamilia_nyererei
ENSNLEG00000002447	TDP2	89	46.939	ENSPNAG00000022162	tdp2a	66	50.769	Pygocentrus_nattereri
ENSNLEG00000002447	TDP2	96	69.298	ENSRNOG00000018246	Tdp2	93	69.186	Rattus_norvegicus
ENSNLEG00000002447	TDP2	100	95.580	ENSRBIG00000037119	TDP2	100	95.580	Rhinopithecus_bieti
ENSNLEG00000002447	TDP2	100	95.580	ENSRROG00000005025	TDP2	100	95.066	Rhinopithecus_roxellana
ENSNLEG00000002447	TDP2	100	91.713	ENSSBOG00000028734	TDP2	100	91.776	Saimiri_boliviensis_boliviensis
ENSNLEG00000002447	TDP2	100	65.449	ENSSHAG00000002506	TDP2	95	65.449	Sarcophilus_harrisii
ENSNLEG00000002447	TDP2	81	52.362	ENSSFOG00015011322	-	71	52.778	Scleropages_formosus
ENSNLEG00000002447	TDP2	89	79.570	ENSSARG00000013547	TDP2	100	79.570	Sorex_araneus
ENSNLEG00000002447	TDP2	96	65.429	ENSSPUG00000008288	TDP2	95	65.429	Sphenodon_punctatus
ENSNLEG00000002447	TDP2	100	86.188	ENSSSCG00000001092	TDP2	100	85.083	Sus_scrofa
ENSNLEG00000002447	TDP2	83	67.816	ENSTGUG00000009035	TDP2	100	67.816	Taeniopygia_guttata
ENSNLEG00000002447	TDP2	95	53.258	ENSTRUG00000014347	tdp2b	96	53.258	Takifugu_rubripes
ENSNLEG00000002447	TDP2	92	49.488	ENSTRUG00000012218	-	95	49.488	Takifugu_rubripes
ENSNLEG00000002447	TDP2	96	52.676	ENSTNIG00000017792	tdp2b	96	52.676	Tetraodon_nigroviridis
ENSNLEG00000002447	TDP2	80	54.023	ENSTNIG00000010260	TDP2	99	54.023	Tetraodon_nigroviridis
ENSNLEG00000002447	TDP2	100	84.807	ENSTTRG00000016376	TDP2	97	86.040	Tursiops_truncatus
ENSNLEG00000002447	TDP2	100	79.050	ENSUAMG00000025939	TDP2	100	79.050	Ursus_americanus
ENSNLEG00000002447	TDP2	97	81.908	ENSUMAG00000020111	TDP2	100	81.908	Ursus_maritimus
ENSNLEG00000002447	TDP2	98	62.228	ENSXETG00000014826	tdp2	96	62.674	Xenopus_tropicalis
ENSNLEG00000002447	TDP2	79	50.598	ENSXCOG00000010778	-	69	50.598	Xiphophorus_couchianus
ENSNLEG00000002447	TDP2	79	50.598	ENSXMAG00000022252	-	72	50.598	Xiphophorus_maculatus