EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000002518 (Gene tree)
Gene ID: 100585941
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 90025 bases
Position: chr5:14139282-14229306
Accession: 100585941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000003119	SpoU_methylase	PF00588.19	1.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000003277	TARBP1-201	5105	XM_003267273	ENSNLEP00000003119	1621 (aa)	XP_003267321	G1QQA1

Gene Model

Click here to download ENSNLEG00000002518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000002518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000002518	TARBP1	100	98.334	ENSG00000059588	TARBP1	100	98.334	Homo_sapiens
ENSNLEG00000002518	TARBP1	99	42.039	ENSAPOG00000016419	si:dkey-85a20.4	86	45.220	Acanthochromis_polyacanthus
ENSNLEG00000002518	TARBP1	84	85.756	ENSAMEG00000003359	TARBP1	100	85.756	Ailuropoda_melanoleuca
ENSNLEG00000002518	TARBP1	91	44.423	ENSATEG00000020266	si:dkey-85a20.4	88	45.150	Anabas_testudineus
ENSNLEG00000002518	TARBP1	84	67.808	ENSAPLG00000007666	TARBP1	99	68.721	Anas_platyrhynchos
ENSNLEG00000002518	TARBP1	99	58.543	ENSACAG00000001142	TARBP1	99	58.175	Anolis_carolinensis
ENSNLEG00000002518	TARBP1	99	84.152	ENSBTAG00000004517	TARBP1	99	84.398	Bos_taurus
ENSNLEG00000002518	TARBP1	100	94.633	ENSCJAG00000018155	TARBP1	100	94.633	Callithrix_jacchus
ENSNLEG00000002518	TARBP1	88	85.714	ENSCAFG00000011533	TARBP1	100	86.017	Canis_familiaris
ENSNLEG00000002518	TARBP1	99	84.540	ENSCAFG00020027141	TARBP1	99	85.153	Canis_lupus_dingo
ENSNLEG00000002518	TARBP1	99	83.005	ENSCHIG00000011437	TARBP1	99	83.682	Capra_hircus
ENSNLEG00000002518	TARBP1	81	88.626	ENSTSYG00000010382	TARBP1	97	88.321	Carlito_syrichta
ENSNLEG00000002518	TARBP1	79	69.688	ENSCAPG00000010831	TARBP1	99	69.688	Cavia_aperea
ENSNLEG00000002518	TARBP1	99	76.529	ENSCPOG00000013995	TARBP1	99	76.467	Cavia_porcellus
ENSNLEG00000002518	TARBP1	100	95.188	ENSCCAG00000037278	TARBP1	100	95.188	Cebus_capucinus
ENSNLEG00000002518	TARBP1	100	97.039	ENSCATG00000011754	TARBP1	100	97.039	Cercocebus_atys
ENSNLEG00000002518	TARBP1	83	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSNLEG00000002518	TARBP1	79	97.512	ENSCSAG00000010100	TARBP1	100	97.512	Chlorocebus_sabaeus
ENSNLEG00000002518	TARBP1	95	66.366	ENSCPBG00000005587	TARBP1	99	68.226	Chrysemys_picta_bellii
ENSNLEG00000002518	TARBP1	84	97.647	ENSCANG00000034343	TARBP1	100	97.647	Colobus_angolensis_palliatus
ENSNLEG00000002518	TARBP1	99	74.691	ENSCGRG00001016690	Tarbp1	99	74.381	Cricetulus_griseus_chok1gshd
ENSNLEG00000002518	TARBP1	91	76.434	ENSCGRG00000016893	Tarbp1	99	76.971	Cricetulus_griseus_crigri
ENSNLEG00000002518	TARBP1	99	40.219	ENSCSEG00000005255	si:dkey-85a20.4	83	48.862	Cynoglossus_semilaevis
ENSNLEG00000002518	TARBP1	85	46.319	ENSDARG00000079055	si:dkey-85a20.4	99	54.325	Danio_rerio
ENSNLEG00000002518	TARBP1	99	83.756	ENSDNOG00000008637	TARBP1	99	83.635	Dasypus_novemcinctus
ENSNLEG00000002518	TARBP1	80	74.614	ENSDORG00000007984	Tarbp1	100	74.614	Dipodomys_ordii
ENSNLEG00000002518	TARBP1	99	87.869	ENSEASG00005000252	TARBP1	99	87.869	Equus_asinus_asinus
ENSNLEG00000002518	TARBP1	99	87.869	ENSECAG00000023673	TARBP1	99	88.403	Equus_caballus
ENSNLEG00000002518	TARBP1	85	44.940	ENSELUG00000012193	si:dkey-85a20.4	86	44.940	Esox_lucius
ENSNLEG00000002518	TARBP1	99	83.498	ENSFCAG00000014183	TARBP1	99	83.498	Felis_catus
ENSNLEG00000002518	TARBP1	80	68.558	ENSFALG00000013565	TARBP1	99	68.477	Ficedula_albicollis
ENSNLEG00000002518	TARBP1	79	76.623	ENSFDAG00000001308	TARBP1	99	76.547	Fukomys_damarensis
ENSNLEG00000002518	TARBP1	81	54.875	ENSFHEG00000007565	si:dkey-85a20.4	76	54.596	Fundulus_heteroclitus
ENSNLEG00000002518	TARBP1	84	43.350	ENSGMOG00000004549	si:dkey-85a20.4	99	43.350	Gadus_morhua
ENSNLEG00000002518	TARBP1	96	65.100	ENSGALG00000011000	TARBP1	100	60.442	Gallus_gallus
ENSNLEG00000002518	TARBP1	99	41.462	ENSGAFG00000007387	si:dkey-85a20.4	85	44.523	Gambusia_affinis
ENSNLEG00000002518	TARBP1	86	45.168	ENSGACG00000005865	si:dkey-85a20.4	99	45.238	Gasterosteus_aculeatus
ENSNLEG00000002518	TARBP1	99	66.911	ENSGAGG00000012102	TARBP1	97	71.680	Gopherus_agassizii
ENSNLEG00000002518	TARBP1	85	94.909	ENSGGOG00000022879	TARBP1	100	94.909	Gorilla_gorilla
ENSNLEG00000002518	TARBP1	86	46.295	ENSHBUG00000008877	si:dkey-85a20.4	85	46.366	Haplochromis_burtoni
ENSNLEG00000002518	TARBP1	99	78.567	ENSHGLG00000011592	TARBP1	99	78.629	Heterocephalus_glaber_female
ENSNLEG00000002518	TARBP1	94	78.820	ENSHGLG00100015169	TARBP1	99	78.607	Heterocephalus_glaber_male
ENSNLEG00000002518	TARBP1	99	40.315	ENSIPUG00000005249	si:dkey-85a20.4	84	43.570	Ictalurus_punctatus
ENSNLEG00000002518	TARBP1	87	76.877	ENSSTOG00000032291	TARBP1	99	76.729	Ictidomys_tridecemlineatus
ENSNLEG00000002518	TARBP1	95	73.324	ENSJJAG00000017840	Tarbp1	99	73.324	Jaculus_jaculus
ENSNLEG00000002518	TARBP1	71	47.995	ENSKMAG00000017546	si:dkey-85a20.4	71	48.396	Kryptolebias_marmoratus
ENSNLEG00000002518	TARBP1	65	50.665	ENSLBEG00000012132	si:dkey-85a20.4	74	50.532	Labrus_bergylta
ENSNLEG00000002518	TARBP1	99	51.506	ENSLACG00000004337	TARBP1	99	51.054	Latimeria_chalumnae
ENSNLEG00000002518	TARBP1	99	46.931	ENSLOCG00000016214	si:dkey-85a20.4	84	51.636	Lepisosteus_oculatus
ENSNLEG00000002518	TARBP1	96	82.242	ENSLAFG00000011394	TARBP1	100	82.242	Loxodonta_africana
ENSNLEG00000002518	TARBP1	100	93.161	ENSMFAG00000041068	TARBP1	100	93.222	Macaca_fascicularis
ENSNLEG00000002518	TARBP1	100	94.031	ENSMMUG00000021703	TARBP1	100	94.277	Macaca_mulatta
ENSNLEG00000002518	TARBP1	100	97.039	ENSMNEG00000045002	TARBP1	100	97.039	Macaca_nemestrina
ENSNLEG00000002518	TARBP1	84	97.491	ENSMLEG00000044182	TARBP1	100	97.491	Mandrillus_leucophaeus
ENSNLEG00000002518	TARBP1	94	44.031	ENSMAMG00000021760	si:dkey-85a20.4	89	45.379	Mastacembelus_armatus
ENSNLEG00000002518	TARBP1	86	46.224	ENSMZEG00005005751	si:dkey-85a20.4	85	46.295	Maylandia_zebra
ENSNLEG00000002518	TARBP1	99	73.733	ENSMAUG00000020968	Tarbp1	99	73.486	Mesocricetus_auratus
ENSNLEG00000002518	TARBP1	99	79.951	ENSMICG00000015280	TARBP1	99	79.704	Microcebus_murinus
ENSNLEG00000002518	TARBP1	99	73.593	ENSMOCG00000004128	Tarbp1	99	73.717	Microtus_ochrogaster
ENSNLEG00000002518	TARBP1	99	41.329	ENSMMOG00000007795	si:dkey-85a20.4	85	44.074	Mola_mola
ENSNLEG00000002518	TARBP1	99	72.738	ENSMODG00000008504	TARBP1	100	72.694	Monodelphis_domestica
ENSNLEG00000002518	TARBP1	85	44.857	ENSMALG00000002916	si:dkey-85a20.4	85	44.953	Monopterus_albus
ENSNLEG00000002518	TARBP1	99	72.649	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.710	Mus_caroli
ENSNLEG00000002518	TARBP1	99	72.418	ENSMUSG00000090290	Tarbp1	99	72.480	Mus_musculus
ENSNLEG00000002518	TARBP1	99	72.946	MGP_PahariEiJ_G0023326	Tarbp1	99	73.008	Mus_pahari
ENSNLEG00000002518	TARBP1	99	72.565	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.626	Mus_spretus
ENSNLEG00000002518	TARBP1	77	83.736	ENSMPUG00000002802	TARBP1	99	83.655	Mustela_putorius_furo
ENSNLEG00000002518	TARBP1	84	75.291	ENSMLUG00000002414	TARBP1	99	75.291	Myotis_lucifugus
ENSNLEG00000002518	TARBP1	69	77.331	ENSMEUG00000011370	-	69	77.331	Notamacropus_eugenii
ENSNLEG00000002518	TARBP1	71	86.070	ENSOPRG00000013822	TARBP1	71	86.070	Ochotona_princeps
ENSNLEG00000002518	TARBP1	99	73.626	ENSODEG00000005238	TARBP1	99	74.198	Octodon_degus
ENSNLEG00000002518	TARBP1	86	46.408	ENSONIG00000009789	si:dkey-85a20.4	99	46.479	Oreochromis_niloticus
ENSNLEG00000002518	TARBP1	100	85.714	ENSOCUG00000017418	TARBP1	99	85.591	Oryctolagus_cuniculus
ENSNLEG00000002518	TARBP1	99	40.071	ENSORLG00000010529	si:dkey-85a20.4	85	43.156	Oryzias_latipes
ENSNLEG00000002518	TARBP1	99	39.953	ENSORLG00020019264	si:dkey-85a20.4	88	42.381	Oryzias_latipes_hni
ENSNLEG00000002518	TARBP1	99	40.214	ENSORLG00015003276	si:dkey-85a20.4	85	43.198	Oryzias_latipes_hsok
ENSNLEG00000002518	TARBP1	99	84.762	ENSOGAG00000002379	TARBP1	100	84.516	Otolemur_garnettii
ENSNLEG00000002518	TARBP1	91	89.130	ENSOARG00000003434	TARBP1	99	83.925	Ovis_aries
ENSNLEG00000002518	TARBP1	84	98.459	ENSPPAG00000028097	TARBP1	100	98.459	Pan_paniscus
ENSNLEG00000002518	TARBP1	95	86.310	ENSPPRG00000013561	TARBP1	99	88.272	Panthera_pardus
ENSNLEG00000002518	TARBP1	83	86.086	ENSPTIG00000009281	TARBP1	99	86.086	Panthera_tigris_altaica
ENSNLEG00000002518	TARBP1	100	98.213	ENSPTRG00000002124	TARBP1	100	98.213	Pan_troglodytes
ENSNLEG00000002518	TARBP1	100	97.224	ENSPANG00000021933	TARBP1	100	97.224	Papio_anubis
ENSNLEG00000002518	TARBP1	100	43.424	ENSPKIG00000016716	si:dkey-85a20.4	85	46.910	Paramormyrops_kingsleyae
ENSNLEG00000002518	TARBP1	79	70.930	ENSPSIG00000010699	TARBP1	100	70.853	Pelodiscus_sinensis
ENSNLEG00000002518	TARBP1	94	76.401	ENSPEMG00000006888	Tarbp1	99	77.145	Peromyscus_maniculatus_bairdii
ENSNLEG00000002518	TARBP1	92	82.524	ENSPCIG00000029710	TARBP1	99	82.524	Phascolarctos_cinereus
ENSNLEG00000002518	TARBP1	86	45.032	ENSPFOG00000013020	si:dkey-85a20.4	99	45.032	Poecilia_formosa
ENSNLEG00000002518	TARBP1	99	41.847	ENSPLAG00000006044	si:dkey-85a20.4	85	44.888	Poecilia_latipinna
ENSNLEG00000002518	TARBP1	99	41.966	ENSPMEG00000017857	si:dkey-85a20.4	85	45.000	Poecilia_mexicana
ENSNLEG00000002518	TARBP1	99	42.137	ENSPREG00000022753	si:dkey-85a20.4	85	45.276	Poecilia_reticulata
ENSNLEG00000002518	TARBP1	97	98.918	ENSPPYG00000000102	TARBP1	100	98.918	Pongo_abelii
ENSNLEG00000002518	TARBP1	85	93.333	ENSPCAG00000004808	TARBP1	85	93.333	Procavia_capensis
ENSNLEG00000002518	TARBP1	99	86.675	ENSPCOG00000005666	TARBP1	100	86.243	Propithecus_coquereli
ENSNLEG00000002518	TARBP1	99	67.730	ENSPVAG00000014798	TARBP1	99	67.726	Pteropus_vampyrus
ENSNLEG00000002518	TARBP1	86	44.965	ENSPNYG00000019135	si:dkey-85a20.4	85	44.729	Pundamilia_nyererei
ENSNLEG00000002518	TARBP1	99	68.870	ENSRNOG00000053574	Tarbp1	99	68.561	Rattus_norvegicus
ENSNLEG00000002518	TARBP1	98	90.470	ENSRBIG00000043362	TARBP1	99	100.000	Rhinopithecus_bieti
ENSNLEG00000002518	TARBP1	100	92.844	ENSRROG00000029527	TARBP1	100	92.844	Rhinopithecus_roxellana
ENSNLEG00000002518	TARBP1	91	93.996	ENSSBOG00000034503	TARBP1	100	93.996	Saimiri_boliviensis_boliviensis
ENSNLEG00000002518	TARBP1	83	75.608	ENSSHAG00000000013	TARBP1	100	75.608	Sarcophilus_harrisii
ENSNLEG00000002518	TARBP1	84	46.220	ENSSFOG00015002660	si:dkey-85a20.4	97	47.231	Scleropages_formosus
ENSNLEG00000002518	TARBP1	91	44.481	ENSSMAG00000007081	si:dkey-85a20.4	88	45.124	Scophthalmus_maximus
ENSNLEG00000002518	TARBP1	99	41.586	ENSSDUG00000023566	si:dkey-85a20.4	86	44.728	Seriola_dumerili
ENSNLEG00000002518	TARBP1	99	43.216	ENSSLDG00000020200	si:dkey-85a20.4	86	46.499	Seriola_lalandi_dorsalis
ENSNLEG00000002518	TARBP1	89	85.714	ENSSARG00000012207	TARBP1	89	85.714	Sorex_araneus
ENSNLEG00000002518	TARBP1	99	64.997	ENSSPUG00000015364	TARBP1	100	64.936	Sphenodon_punctatus
ENSNLEG00000002518	TARBP1	91	44.554	ENSSPAG00000007213	si:dkey-85a20.4	89	45.071	Stegastes_partitus
ENSNLEG00000002518	TARBP1	99	85.354	ENSSSCG00000010160	TARBP1	99	85.302	Sus_scrofa
ENSNLEG00000002518	TARBP1	80	68.755	ENSTGUG00000010214	TARBP1	100	68.755	Taeniopygia_guttata
ENSNLEG00000002518	TARBP1	91	40.664	ENSTNIG00000016586	si:dkey-85a20.4	99	45.105	Tetraodon_nigroviridis
ENSNLEG00000002518	TARBP1	91	83.066	ENSTTRG00000008707	TARBP1	95	83.735	Tursiops_truncatus
ENSNLEG00000002518	TARBP1	82	85.316	ENSUMAG00000006730	TARBP1	99	85.316	Ursus_maritimus
ENSNLEG00000002518	TARBP1	80	92.784	ENSVPAG00000007665	TARBP1	85	92.784	Vicugna_pacos
ENSNLEG00000002518	TARBP1	85	86.199	ENSVVUG00000007460	TARBP1	97	85.910	Vulpes_vulpes
ENSNLEG00000002518	TARBP1	84	56.277	ENSXETG00000016224	tarbp1	99	56.204	Xenopus_tropicalis
ENSNLEG00000002518	TARBP1	78	49.113	ENSXCOG00000011779	si:dkey-85a20.4	93	48.977	Xiphophorus_couchianus
ENSNLEG00000002518	TARBP1	65	43.299	ENSXMAG00000009600	si:dkey-85a20.4	100	43.030	Xiphophorus_maculatus