EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000002541 (Gene tree)
Gene ID: 100585432
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 42632 bases
Position: chr16:52543226-52585857
Accession: 100585432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000038985	POP1	PF06978.11	1.6e-38	1	2
ENSNLEP00000038985	POP1	PF06978.11	1.6e-38	2	2
ENSNLEP00000003156	POP1	PF06978.11	1.8e-38	1	2
ENSNLEP00000003156	POP1	PF06978.11	1.8e-38	2	2
ENSNLEP00000038985	POPLD	PF08170.12	9.9e-28	1	1
ENSNLEP00000003156	POPLD	PF08170.12	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000035700	POP1-202	2976	-	ENSNLEP00000038985	991 (aa)	-	A0A2I3H638
ENSNLET00000003316	POP1-201	4740	XM_003256037	ENSNLEP00000003156	1024 (aa)	XP_003256085	G1QQD8

Gene Model

Click here to download ENSNLEG00000002541's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG
nle03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000002541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000002541	POP1	100	97.070	ENSG00000104356	POP1	100	97.814	Homo_sapiens
ENSNLEG00000002541	POP1	100	48.211	ENSAPOG00000008198	pop1	100	48.117	Acanthochromis_polyacanthus
ENSNLEG00000002541	POP1	100	79.806	ENSAMEG00000000556	POP1	100	79.806	Ailuropoda_melanoleuca
ENSNLEG00000002541	POP1	90	50.106	ENSACIG00000004169	POP1	100	46.986	Amphilophus_citrinellus
ENSNLEG00000002541	POP1	100	47.493	ENSAOCG00000010991	pop1	100	47.398	Amphiprion_ocellaris
ENSNLEG00000002541	POP1	90	47.917	ENSAPEG00000007607	pop1	95	48.542	Amphiprion_percula
ENSNLEG00000002541	POP1	100	46.798	ENSATEG00000024814	POP1	100	46.887	Anabas_testudineus
ENSNLEG00000002541	POP1	92	62.749	ENSAPLG00000014418	POP1	100	62.749	Anas_platyrhynchos
ENSNLEG00000002541	POP1	100	56.069	ENSACAG00000016083	POP1	100	56.069	Anolis_carolinensis
ENSNLEG00000002541	POP1	93	93.769	ENSANAG00000026360	POP1	100	93.769	Aotus_nancymaae
ENSNLEG00000002541	POP1	93	53.878	ENSACLG00000010951	pop1	100	48.068	Astatotilapia_calliptera
ENSNLEG00000002541	POP1	100	45.588	ENSAMXG00000014483	POP1	100	45.170	Astyanax_mexicanus
ENSNLEG00000002541	POP1	100	80.273	ENSBTAG00000012596	POP1	100	80.273	Bos_taurus
ENSNLEG00000002541	POP1	100	92.383	ENSCJAG00000015567	POP1	100	92.383	Callithrix_jacchus
ENSNLEG00000002541	POP1	100	80.273	ENSCAFG00000000469	POP1	100	80.273	Canis_familiaris
ENSNLEG00000002541	POP1	100	81.348	ENSCAFG00020026765	POP1	100	81.348	Canis_lupus_dingo
ENSNLEG00000002541	POP1	100	80.390	ENSCHIG00000017066	POP1	100	80.390	Capra_hircus
ENSNLEG00000002541	POP1	100	85.742	ENSTSYG00000003097	POP1	100	85.742	Carlito_syrichta
ENSNLEG00000002541	POP1	100	77.551	ENSCAPG00000007251	POP1	100	77.551	Cavia_aperea
ENSNLEG00000002541	POP1	100	80.371	ENSCPOG00000002901	POP1	100	80.371	Cavia_porcellus
ENSNLEG00000002541	POP1	100	92.188	ENSCCAG00000018939	POP1	100	92.188	Cebus_capucinus
ENSNLEG00000002541	POP1	100	95.801	ENSCATG00000040916	POP1	100	95.801	Cercocebus_atys
ENSNLEG00000002541	POP1	100	81.543	ENSCLAG00000007208	POP1	97	81.543	Chinchilla_lanigera
ENSNLEG00000002541	POP1	90	94.902	ENSCSAG00000012340	POP1	99	94.902	Chlorocebus_sabaeus
ENSNLEG00000002541	POP1	95	79.713	ENSCHOG00000011432	POP1	100	79.713	Choloepus_hoffmanni
ENSNLEG00000002541	POP1	100	65.078	ENSCPBG00000006373	POP1	100	65.078	Chrysemys_picta_bellii
ENSNLEG00000002541	POP1	87	33.956	ENSCING00000008323	-	96	32.759	Ciona_intestinalis
ENSNLEG00000002541	POP1	100	95.703	ENSCANG00000001647	POP1	100	95.703	Colobus_angolensis_palliatus
ENSNLEG00000002541	POP1	100	76.585	ENSCGRG00001017308	Pop1	100	76.585	Cricetulus_griseus_chok1gshd
ENSNLEG00000002541	POP1	100	71.024	ENSCGRG00000010824	Pop1	100	71.024	Cricetulus_griseus_crigri
ENSNLEG00000002541	POP1	100	46.015	ENSCSEG00000008737	POP1	100	46.300	Cynoglossus_semilaevis
ENSNLEG00000002541	POP1	100	47.159	ENSCVAG00000022248	pop1	100	47.159	Cyprinodon_variegatus
ENSNLEG00000002541	POP1	100	77.286	ENSDNOG00000019974	POP1	100	77.286	Dasypus_novemcinctus
ENSNLEG00000002541	POP1	100	71.875	ENSDORG00000015384	Pop1	100	71.289	Dipodomys_ordii
ENSNLEG00000002541	POP1	60	32.911	FBgn0026702	l(1)G0045	70	32.692	Drosophila_melanogaster
ENSNLEG00000002541	POP1	89	70.175	ENSETEG00000007839	POP1	88	70.175	Echinops_telfairi
ENSNLEG00000002541	POP1	50	35.060	ENSEBUG00000014694	-	99	35.060	Eptatretus_burgeri
ENSNLEG00000002541	POP1	100	83.301	ENSEASG00005003189	POP1	98	83.301	Equus_asinus_asinus
ENSNLEG00000002541	POP1	100	83.203	ENSECAG00000024236	POP1	100	83.203	Equus_caballus
ENSNLEG00000002541	POP1	69	77.143	ENSEEUG00000003050	-	70	77.778	Erinaceus_europaeus
ENSNLEG00000002541	POP1	100	47.483	ENSELUG00000003526	pop1	100	47.198	Esox_lucius
ENSNLEG00000002541	POP1	100	83.301	ENSFCAG00000002168	POP1	100	83.301	Felis_catus
ENSNLEG00000002541	POP1	100	60.174	ENSFALG00000005711	POP1	100	60.308	Ficedula_albicollis
ENSNLEG00000002541	POP1	100	82.031	ENSFDAG00000017068	POP1	100	82.031	Fukomys_damarensis
ENSNLEG00000002541	POP1	100	47.378	ENSFHEG00000019518	pop1	100	47.087	Fundulus_heteroclitus
ENSNLEG00000002541	POP1	93	45.804	ENSGMOG00000000659	POP1	98	45.804	Gadus_morhua
ENSNLEG00000002541	POP1	100	47.353	ENSGAFG00000019770	POP1	100	47.353	Gambusia_affinis
ENSNLEG00000002541	POP1	100	46.565	ENSGACG00000003499	pop1	100	46.565	Gasterosteus_aculeatus
ENSNLEG00000002541	POP1	100	63.760	ENSGAGG00000011737	POP1	98	63.953	Gopherus_agassizii
ENSNLEG00000002541	POP1	100	96.973	ENSGGOG00000003176	POP1	100	96.973	Gorilla_gorilla
ENSNLEG00000002541	POP1	100	47.928	ENSHBUG00000021583	pop1	100	47.875	Haplochromis_burtoni
ENSNLEG00000002541	POP1	100	81.445	ENSHGLG00000006029	POP1	100	81.445	Heterocephalus_glaber_female
ENSNLEG00000002541	POP1	100	81.445	ENSHGLG00100016879	POP1	100	81.445	Heterocephalus_glaber_male
ENSNLEG00000002541	POP1	90	48.832	ENSHCOG00000013888	pop1	96	48.832	Hippocampus_comes
ENSNLEG00000002541	POP1	100	45.288	ENSIPUG00000018336	pop1	91	61.446	Ictalurus_punctatus
ENSNLEG00000002541	POP1	100	82.812	ENSSTOG00000011455	POP1	97	82.812	Ictidomys_tridecemlineatus
ENSNLEG00000002541	POP1	100	78.607	ENSJJAG00000013325	Pop1	100	78.607	Jaculus_jaculus
ENSNLEG00000002541	POP1	100	47.042	ENSKMAG00000001346	POP1	100	47.042	Kryptolebias_marmoratus
ENSNLEG00000002541	POP1	100	45.873	ENSLBEG00000024457	POP1	100	45.533	Labrus_bergylta
ENSNLEG00000002541	POP1	93	55.544	ENSLACG00000012498	POP1	99	55.411	Latimeria_chalumnae
ENSNLEG00000002541	POP1	100	51.344	ENSLOCG00000009817	POP1	100	51.538	Lepisosteus_oculatus
ENSNLEG00000002541	POP1	100	82.588	ENSLAFG00000010770	POP1	100	82.588	Loxodonta_africana
ENSNLEG00000002541	POP1	100	95.508	ENSMFAG00000000347	POP1	100	95.508	Macaca_fascicularis
ENSNLEG00000002541	POP1	100	94.922	ENSMNEG00000036870	POP1	100	94.922	Macaca_nemestrina
ENSNLEG00000002541	POP1	100	95.410	ENSMLEG00000034986	POP1	100	95.410	Mandrillus_leucophaeus
ENSNLEG00000002541	POP1	100	47.633	ENSMAMG00000004040	pop1	100	47.633	Mastacembelus_armatus
ENSNLEG00000002541	POP1	100	48.120	ENSMZEG00005025448	pop1	100	48.068	Maylandia_zebra
ENSNLEG00000002541	POP1	100	57.441	ENSMGAG00000012167	POP1	100	58.074	Meleagris_gallopavo
ENSNLEG00000002541	POP1	100	76.511	ENSMAUG00000017537	Pop1	100	76.511	Mesocricetus_auratus
ENSNLEG00000002541	POP1	100	86.816	ENSMICG00000004361	POP1	100	86.816	Microcebus_murinus
ENSNLEG00000002541	POP1	100	75.293	ENSMOCG00000006356	Pop1	100	76.172	Microtus_ochrogaster
ENSNLEG00000002541	POP1	100	44.412	ENSMMOG00000018242	pop1	100	44.412	Mola_mola
ENSNLEG00000002541	POP1	100	69.246	ENSMODG00000006561	POP1	100	68.472	Monodelphis_domestica
ENSNLEG00000002541	POP1	92	51.989	ENSMALG00000012621	POP1	100	47.343	Monopterus_albus
ENSNLEG00000002541	POP1	100	76.270	MGP_CAROLIEiJ_G0019726	Pop1	100	76.270	Mus_caroli
ENSNLEG00000002541	POP1	100	76.758	ENSMUSG00000022325	Pop1	100	76.758	Mus_musculus
ENSNLEG00000002541	POP1	100	76.855	MGP_PahariEiJ_G0019735	Pop1	100	76.855	Mus_pahari
ENSNLEG00000002541	POP1	100	76.172	MGP_SPRETEiJ_G0020622	Pop1	100	76.172	Mus_spretus
ENSNLEG00000002541	POP1	100	81.420	ENSMPUG00000015250	POP1	100	81.323	Mustela_putorius_furo
ENSNLEG00000002541	POP1	100	77.290	ENSMLUG00000010204	POP1	100	77.388	Myotis_lucifugus
ENSNLEG00000002541	POP1	100	81.641	ENSNGAG00000001582	Pop1	100	81.641	Nannospalax_galili
ENSNLEG00000002541	POP1	89	48.180	ENSNBRG00000002356	pop1	94	48.301	Neolamprologus_brichardi
ENSNLEG00000002541	POP1	90	71.758	ENSMEUG00000003118	POP1	92	71.758	Notamacropus_eugenii
ENSNLEG00000002541	POP1	100	79.004	ENSOPRG00000007667	POP1	100	78.906	Ochotona_princeps
ENSNLEG00000002541	POP1	100	79.825	ENSODEG00000003984	POP1	100	79.825	Octodon_degus
ENSNLEG00000002541	POP1	100	48.250	ENSONIG00000016445	pop1	100	48.102	Oreochromis_niloticus
ENSNLEG00000002541	POP1	59	68.902	ENSOANG00000001278	-	94	69.512	Ornithorhynchus_anatinus
ENSNLEG00000002541	POP1	100	81.147	ENSOCUG00000017400	POP1	100	81.147	Oryctolagus_cuniculus
ENSNLEG00000002541	POP1	100	47.358	ENSORLG00000002839	pop1	100	47.788	Oryzias_latipes
ENSNLEG00000002541	POP1	90	49.788	ENSORLG00020022450	POP1	96	49.893	Oryzias_latipes_hni
ENSNLEG00000002541	POP1	100	47.404	ENSORLG00015012746	POP1	100	47.692	Oryzias_latipes_hsok
ENSNLEG00000002541	POP1	100	48.259	ENSOMEG00000006915	pop1	99	47.485	Oryzias_melastigma
ENSNLEG00000002541	POP1	100	84.082	ENSOGAG00000001466	POP1	100	84.082	Otolemur_garnettii
ENSNLEG00000002541	POP1	100	97.168	ENSPPAG00000018410	POP1	100	97.168	Pan_paniscus
ENSNLEG00000002541	POP1	100	83.122	ENSPPRG00000005002	POP1	100	83.122	Panthera_pardus
ENSNLEG00000002541	POP1	100	83.512	ENSPTIG00000016527	POP1	100	83.512	Panthera_tigris_altaica
ENSNLEG00000002541	POP1	100	97.266	ENSPTRG00000020458	POP1	100	97.266	Pan_troglodytes
ENSNLEG00000002541	POP1	100	95.215	ENSPANG00000009704	POP1	100	95.215	Papio_anubis
ENSNLEG00000002541	POP1	100	49.425	ENSPKIG00000016325	POP1	100	49.425	Paramormyrops_kingsleyae
ENSNLEG00000002541	POP1	100	62.924	ENSPSIG00000012343	POP1	100	62.949	Pelodiscus_sinensis
ENSNLEG00000002541	POP1	90	49.412	ENSPMGG00000022253	POP1	95	49.145	Periophthalmus_magnuspinnatus
ENSNLEG00000002541	POP1	99	75.407	ENSPEMG00000023633	Pop1	100	75.407	Peromyscus_maniculatus_bairdii
ENSNLEG00000002541	POP1	90	43.717	ENSPMAG00000003209	POP1	100	43.750	Petromyzon_marinus
ENSNLEG00000002541	POP1	100	67.888	ENSPCIG00000012216	POP1	100	67.954	Phascolarctos_cinereus
ENSNLEG00000002541	POP1	100	48.848	ENSPFOG00000012490	POP1	100	48.848	Poecilia_formosa
ENSNLEG00000002541	POP1	100	48.703	ENSPLAG00000004646	POP1	100	48.703	Poecilia_latipinna
ENSNLEG00000002541	POP1	100	49.138	ENSPMEG00000019592	POP1	100	49.138	Poecilia_mexicana
ENSNLEG00000002541	POP1	100	48.752	ENSPREG00000020951	POP1	100	48.752	Poecilia_reticulata
ENSNLEG00000002541	POP1	100	97.266	ENSPPYG00000018777	POP1	100	97.266	Pongo_abelii
ENSNLEG00000002541	POP1	100	76.195	ENSPCAG00000016662	POP1	100	75.805	Procavia_capensis
ENSNLEG00000002541	POP1	100	87.305	ENSPCOG00000019420	POP1	100	87.305	Propithecus_coquereli
ENSNLEG00000002541	POP1	100	81.659	ENSPVAG00000014468	POP1	100	81.659	Pteropus_vampyrus
ENSNLEG00000002541	POP1	89	48.817	ENSPNYG00000004476	pop1	95	48.879	Pundamilia_nyererei
ENSNLEG00000002541	POP1	100	45.147	ENSPNAG00000000265	pop1	100	43.223	Pygocentrus_nattereri
ENSNLEG00000002541	POP1	100	77.344	ENSRNOG00000005243	Pop1	100	77.344	Rattus_norvegicus
ENSNLEG00000002541	POP1	100	95.801	ENSRBIG00000007996	POP1	100	95.801	Rhinopithecus_bieti
ENSNLEG00000002541	POP1	100	95.996	ENSRROG00000012334	POP1	100	95.996	Rhinopithecus_roxellana
ENSNLEG00000002541	POP1	99	93.182	ENSSBOG00000020830	POP1	100	93.182	Saimiri_boliviensis_boliviensis
ENSNLEG00000002541	POP1	100	68.538	ENSSHAG00000000296	POP1	100	68.538	Sarcophilus_harrisii
ENSNLEG00000002541	POP1	100	47.943	ENSSFOG00015007429	pop1	99	47.943	Scleropages_formosus
ENSNLEG00000002541	POP1	86	54.058	ENSSMAG00000010467	POP1	98	49.175	Scophthalmus_maximus
ENSNLEG00000002541	POP1	100	46.610	ENSSDUG00000007817	POP1	100	46.798	Seriola_dumerili
ENSNLEG00000002541	POP1	100	47.543	ENSSLDG00000012565	POP1	100	47.925	Seriola_lalandi_dorsalis
ENSNLEG00000002541	POP1	100	58.487	ENSSPUG00000003550	-	100	58.858	Sphenodon_punctatus
ENSNLEG00000002541	POP1	90	50.108	ENSSPAG00000014955	pop1	94	50.000	Stegastes_partitus
ENSNLEG00000002541	POP1	100	81.348	ENSSSCG00000006078	POP1	100	81.348	Sus_scrofa
ENSNLEG00000002541	POP1	92	57.143	ENSTGUG00000012011	-	100	57.143	Taeniopygia_guttata
ENSNLEG00000002541	POP1	89	48.925	ENSTRUG00000010856	pop1	92	48.925	Takifugu_rubripes
ENSNLEG00000002541	POP1	92	48.910	ENSTNIG00000013297	pop1	99	48.910	Tetraodon_nigroviridis
ENSNLEG00000002541	POP1	95	80.655	ENSTBEG00000014214	POP1	100	80.655	Tupaia_belangeri
ENSNLEG00000002541	POP1	100	79.883	ENSTTRG00000016071	POP1	100	79.883	Tursiops_truncatus
ENSNLEG00000002541	POP1	99	77.690	ENSUAMG00000017309	POP1	100	77.690	Ursus_americanus
ENSNLEG00000002541	POP1	92	89.474	ENSUMAG00000016952	POP1	100	89.474	Ursus_maritimus
ENSNLEG00000002541	POP1	82	87.591	ENSVPAG00000008278	POP1	82	87.591	Vicugna_pacos
ENSNLEG00000002541	POP1	100	81.445	ENSVVUG00000010994	POP1	100	81.445	Vulpes_vulpes
ENSNLEG00000002541	POP1	100	43.305	ENSXCOG00000017043	POP1	100	43.816	Xiphophorus_couchianus
ENSNLEG00000002541	POP1	100	47.510	ENSXMAG00000002472	POP1	100	47.510	Xiphophorus_maculatus