EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000003226 (Gene tree)
Gene ID: 100585151
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 20153 bases
Position: chr21:64942055-64962207
Accession: 100585151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000003933	PolyA_pol	PF01743.20	1.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000004128	TRNT1-201	2001	XM_003264916	ENSNLEP00000003933	434 (aa)	XP_003264964	G1QSL5
ENSNLET00000040861	TRNT1-202	174	-	ENSNLEP00000046592	57 (aa)	-	A0A2I3HSS4

Gene Model

Click here to download ENSNLEG00000003226's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000003226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000003226	TRNT1	100	98.387	ENSG00000072756	TRNT1	100	98.387	Homo_sapiens
ENSNLEG00000003226	TRNT1	93	69.630	ENSAPOG00000013687	trnt1	95	69.630	Acanthochromis_polyacanthus
ENSNLEG00000003226	TRNT1	100	92.661	ENSAMEG00000014520	TRNT1	100	92.661	Ailuropoda_melanoleuca
ENSNLEG00000003226	TRNT1	98	68.235	ENSACIG00000021706	trnt1	99	68.235	Amphilophus_citrinellus
ENSNLEG00000003226	TRNT1	98	68.235	ENSAOCG00000024612	trnt1	99	68.235	Amphiprion_ocellaris
ENSNLEG00000003226	TRNT1	96	61.151	ENSAPEG00000022627	trnt1	97	61.151	Amphiprion_percula
ENSNLEG00000003226	TRNT1	93	71.464	ENSATEG00000008928	trnt1	99	71.464	Anabas_testudineus
ENSNLEG00000003226	TRNT1	89	76.744	ENSAPLG00000004258	TRNT1	96	76.744	Anas_platyrhynchos
ENSNLEG00000003226	TRNT1	98	75.349	ENSACAG00000005657	TRNT1	98	75.349	Anolis_carolinensis
ENSNLEG00000003226	TRNT1	100	97.465	ENSANAG00000024802	TRNT1	100	97.465	Aotus_nancymaae
ENSNLEG00000003226	TRNT1	98	68.075	ENSACLG00000022227	trnt1	99	68.075	Astatotilapia_calliptera
ENSNLEG00000003226	TRNT1	98	68.203	ENSAMXG00000003960	trnt1	99	68.203	Astyanax_mexicanus
ENSNLEG00000003226	TRNT1	100	91.935	ENSBTAG00000019534	TRNT1	100	91.935	Bos_taurus
ENSNLEG00000003226	TRNT1	94	44.181	WBGene00010089	hpo-31	94	44.181	Caenorhabditis_elegans
ENSNLEG00000003226	TRNT1	100	97.465	ENSCJAG00000015466	TRNT1	100	97.465	Callithrix_jacchus
ENSNLEG00000003226	TRNT1	100	92.396	ENSCAFG00000005985	TRNT1	99	92.396	Canis_familiaris
ENSNLEG00000003226	TRNT1	100	92.396	ENSCAFG00020014746	TRNT1	99	92.396	Canis_lupus_dingo
ENSNLEG00000003226	TRNT1	100	91.935	ENSCHIG00000007030	TRNT1	99	91.935	Capra_hircus
ENSNLEG00000003226	TRNT1	100	95.853	ENSTSYG00000013390	TRNT1	100	95.853	Carlito_syrichta
ENSNLEG00000003226	TRNT1	87	75.397	ENSCAPG00000006891	TRNT1	100	75.397	Cavia_aperea
ENSNLEG00000003226	TRNT1	99	92.610	ENSCPOG00000007849	TRNT1	99	92.610	Cavia_porcellus
ENSNLEG00000003226	TRNT1	95	93.510	ENSCCAG00000002919	TRNT1	100	95.761	Cebus_capucinus
ENSNLEG00000003226	TRNT1	99	97.921	ENSCATG00000031985	TRNT1	99	97.921	Cercocebus_atys
ENSNLEG00000003226	TRNT1	99	93.303	ENSCLAG00000005186	TRNT1	99	93.303	Chinchilla_lanigera
ENSNLEG00000003226	TRNT1	100	98.387	ENSCSAG00000011052	TRNT1	100	98.387	Chlorocebus_sabaeus
ENSNLEG00000003226	TRNT1	85	91.584	ENSCHOG00000005712	TRNT1	85	91.584	Choloepus_hoffmanni
ENSNLEG00000003226	TRNT1	94	82.598	ENSCPBG00000017636	TRNT1	93	82.598	Chrysemys_picta_bellii
ENSNLEG00000003226	TRNT1	93	44.691	ENSCING00000007069	-	99	44.691	Ciona_intestinalis
ENSNLEG00000003226	TRNT1	97	45.047	ENSCSAVG00000007494	-	99	45.047	Ciona_savignyi
ENSNLEG00000003226	TRNT1	100	97.926	ENSCANG00000039030	TRNT1	100	97.926	Colobus_angolensis_palliatus
ENSNLEG00000003226	TRNT1	100	92.627	ENSCGRG00001009998	Trnt1	100	92.627	Cricetulus_griseus_chok1gshd
ENSNLEG00000003226	TRNT1	100	92.627	ENSCGRG00000013410	Trnt1	100	92.627	Cricetulus_griseus_crigri
ENSNLEG00000003226	TRNT1	94	68.966	ENSCSEG00000008157	trnt1	95	68.966	Cynoglossus_semilaevis
ENSNLEG00000003226	TRNT1	94	70.197	ENSCVAG00000019770	trnt1	96	70.197	Cyprinodon_variegatus
ENSNLEG00000003226	TRNT1	94	70.833	ENSDARG00000075297	trnt1	95	70.833	Danio_rerio
ENSNLEG00000003226	TRNT1	100	93.318	ENSDNOG00000008837	TRNT1	100	93.318	Dasypus_novemcinctus
ENSNLEG00000003226	TRNT1	100	91.014	ENSDORG00000014035	Trnt1	100	91.014	Dipodomys_ordii
ENSNLEG00000003226	TRNT1	92	49.257	FBgn0037369	CG2100	83	49.257	Drosophila_melanogaster
ENSNLEG00000003226	TRNT1	57	91.968	ENSETEG00000018177	TRNT1	100	91.968	Echinops_telfairi
ENSNLEG00000003226	TRNT1	93	62.779	ENSEBUG00000012779	-	95	62.779	Eptatretus_burgeri
ENSNLEG00000003226	TRNT1	100	95.161	ENSEASG00005003577	TRNT1	100	95.161	Equus_asinus_asinus
ENSNLEG00000003226	TRNT1	100	95.392	ENSECAG00000014420	TRNT1	100	95.392	Equus_caballus
ENSNLEG00000003226	TRNT1	100	89.862	ENSEEUG00000009567	TRNT1	100	89.862	Erinaceus_europaeus
ENSNLEG00000003226	TRNT1	94	70.833	ENSELUG00000003802	trnt1	95	70.833	Esox_lucius
ENSNLEG00000003226	TRNT1	100	92.627	ENSFCAG00000026805	TRNT1	99	92.627	Felis_catus
ENSNLEG00000003226	TRNT1	89	74.545	ENSFALG00000013539	TRNT1	100	74.545	Ficedula_albicollis
ENSNLEG00000003226	TRNT1	99	93.072	ENSFDAG00000018412	TRNT1	99	93.072	Fukomys_damarensis
ENSNLEG00000003226	TRNT1	96	68.322	ENSFHEG00000019294	trnt1	99	68.322	Fundulus_heteroclitus
ENSNLEG00000003226	TRNT1	93	68.148	ENSGMOG00000007460	trnt1	95	68.148	Gadus_morhua
ENSNLEG00000003226	TRNT1	94	75.123	ENSGALG00000017368	TRNT1	94	75.123	Gallus_gallus
ENSNLEG00000003226	TRNT1	94	69.951	ENSGAFG00000008647	trnt1	96	69.951	Gambusia_affinis
ENSNLEG00000003226	TRNT1	94	68.227	ENSGACG00000011903	trnt1	96	68.848	Gasterosteus_aculeatus
ENSNLEG00000003226	TRNT1	99	79.630	ENSGAGG00000020942	TRNT1	98	79.630	Gopherus_agassizii
ENSNLEG00000003226	TRNT1	100	98.618	ENSGGOG00000015286	TRNT1	100	98.618	Gorilla_gorilla
ENSNLEG00000003226	TRNT1	98	68.075	ENSHBUG00000002797	trnt1	99	68.075	Haplochromis_burtoni
ENSNLEG00000003226	TRNT1	99	92.610	ENSHGLG00000003649	TRNT1	99	92.610	Heterocephalus_glaber_female
ENSNLEG00000003226	TRNT1	99	87.097	ENSHGLG00000000221	-	99	87.097	Heterocephalus_glaber_female
ENSNLEG00000003226	TRNT1	99	91.455	ENSHGLG00100016421	TRNT1	99	91.455	Heterocephalus_glaber_male
ENSNLEG00000003226	TRNT1	94	67.734	ENSHCOG00000010618	trnt1	95	67.734	Hippocampus_comes
ENSNLEG00000003226	TRNT1	96	68.510	ENSIPUG00000000971	trnt1	97	68.510	Ictalurus_punctatus
ENSNLEG00000003226	TRNT1	100	88.940	ENSSTOG00000000150	TRNT1	98	92.079	Ictidomys_tridecemlineatus
ENSNLEG00000003226	TRNT1	100	93.088	ENSJJAG00000018561	Trnt1	99	93.088	Jaculus_jaculus
ENSNLEG00000003226	TRNT1	96	68.396	ENSKMAG00000011307	trnt1	99	68.396	Kryptolebias_marmoratus
ENSNLEG00000003226	TRNT1	94	63.171	ENSLBEG00000019457	trnt1	97	63.171	Labrus_bergylta
ENSNLEG00000003226	TRNT1	99	71.926	ENSLACG00000013227	TRNT1	99	71.926	Latimeria_chalumnae
ENSNLEG00000003226	TRNT1	99	69.495	ENSLOCG00000011105	trnt1	99	69.495	Lepisosteus_oculatus
ENSNLEG00000003226	TRNT1	100	95.161	ENSLAFG00000023191	TRNT1	100	95.161	Loxodonta_africana
ENSNLEG00000003226	TRNT1	99	98.152	ENSMFAG00000045113	TRNT1	99	98.152	Macaca_fascicularis
ENSNLEG00000003226	TRNT1	99	98.152	ENSMMUG00000017983	TRNT1	99	98.152	Macaca_mulatta
ENSNLEG00000003226	TRNT1	99	98.152	ENSMNEG00000037805	TRNT1	99	98.152	Macaca_nemestrina
ENSNLEG00000003226	TRNT1	88	98.953	ENSMLEG00000033671	TRNT1	99	98.953	Mandrillus_leucophaeus
ENSNLEG00000003226	TRNT1	98	68.235	ENSMAMG00000023401	trnt1	99	68.235	Mastacembelus_armatus
ENSNLEG00000003226	TRNT1	98	68.075	ENSMZEG00005009141	trnt1	99	68.075	Maylandia_zebra
ENSNLEG00000003226	TRNT1	74	75.389	ENSMGAG00000009971	TRNT1	100	75.389	Meleagris_gallopavo
ENSNLEG00000003226	TRNT1	100	92.857	ENSMAUG00000020707	Trnt1	100	92.857	Mesocricetus_auratus
ENSNLEG00000003226	TRNT1	100	93.548	ENSMICG00000016615	TRNT1	100	93.548	Microcebus_murinus
ENSNLEG00000003226	TRNT1	100	93.088	ENSMOCG00000004539	Trnt1	100	93.088	Microtus_ochrogaster
ENSNLEG00000003226	TRNT1	95	68.523	ENSMMOG00000010742	trnt1	97	68.523	Mola_mola
ENSNLEG00000003226	TRNT1	100	84.332	ENSMODG00000004368	TRNT1	100	84.332	Monodelphis_domestica
ENSNLEG00000003226	TRNT1	98	66.824	ENSMALG00000008376	trnt1	99	66.824	Monopterus_albus
ENSNLEG00000003226	TRNT1	100	93.318	MGP_CAROLIEiJ_G0028698	Trnt1	100	93.318	Mus_caroli
ENSNLEG00000003226	TRNT1	100	93.318	ENSMUSG00000013736	Trnt1	100	93.318	Mus_musculus
ENSNLEG00000003226	TRNT1	100	92.627	MGP_PahariEiJ_G0022449	Trnt1	100	92.627	Mus_pahari
ENSNLEG00000003226	TRNT1	100	93.318	MGP_SPRETEiJ_G0029726	Trnt1	100	93.318	Mus_spretus
ENSNLEG00000003226	TRNT1	100	93.088	ENSMPUG00000017017	TRNT1	99	93.088	Mustela_putorius_furo
ENSNLEG00000003226	TRNT1	89	88.860	ENSMLUG00000011864	TRNT1	100	88.860	Myotis_lucifugus
ENSNLEG00000003226	TRNT1	100	91.935	ENSNGAG00000000537	Trnt1	100	91.935	Nannospalax_galili
ENSNLEG00000003226	TRNT1	79	67.919	ENSNBRG00000023606	trnt1	99	67.919	Neolamprologus_brichardi
ENSNLEG00000003226	TRNT1	100	84.332	ENSMEUG00000004684	TRNT1	100	84.332	Notamacropus_eugenii
ENSNLEG00000003226	TRNT1	88	79.896	ENSOPRG00000015067	TRNT1	99	79.896	Ochotona_princeps
ENSNLEG00000003226	TRNT1	99	92.610	ENSODEG00000007597	TRNT1	99	92.610	Octodon_degus
ENSNLEG00000003226	TRNT1	98	68.545	ENSONIG00000020273	trnt1	98	68.545	Oreochromis_niloticus
ENSNLEG00000003226	TRNT1	99	75.463	ENSOANG00000007514	TRNT1	99	75.463	Ornithorhynchus_anatinus
ENSNLEG00000003226	TRNT1	100	85.253	ENSOCUG00000008580	TRNT1	99	85.253	Oryctolagus_cuniculus
ENSNLEG00000003226	TRNT1	96	67.146	ENSORLG00000003165	trnt1	98	67.146	Oryzias_latipes
ENSNLEG00000003226	TRNT1	96	67.386	ENSORLG00020022060	trnt1	98	67.386	Oryzias_latipes_hni
ENSNLEG00000003226	TRNT1	98	65.647	ENSORLG00015018915	trnt1	99	65.647	Oryzias_latipes_hsok
ENSNLEG00000003226	TRNT1	95	66.019	ENSOMEG00000003331	trnt1	97	66.019	Oryzias_melastigma
ENSNLEG00000003226	TRNT1	100	91.705	ENSOARG00000008631	TRNT1	99	91.705	Ovis_aries
ENSNLEG00000003226	TRNT1	100	98.618	ENSPPAG00000043566	TRNT1	100	98.618	Pan_paniscus
ENSNLEG00000003226	TRNT1	99	92.841	ENSPPRG00000001327	TRNT1	99	92.841	Panthera_pardus
ENSNLEG00000003226	TRNT1	100	92.627	ENSPTIG00000011448	TRNT1	99	92.627	Panthera_tigris_altaica
ENSNLEG00000003226	TRNT1	100	98.618	ENSPTRG00000014564	TRNT1	100	98.618	Pan_troglodytes
ENSNLEG00000003226	TRNT1	99	97.921	ENSPANG00000025944	TRNT1	99	97.921	Papio_anubis
ENSNLEG00000003226	TRNT1	98	69.412	ENSPKIG00000020015	trnt1	98	69.412	Paramormyrops_kingsleyae
ENSNLEG00000003226	TRNT1	91	81.612	ENSPSIG00000017356	TRNT1	99	83.333	Pelodiscus_sinensis
ENSNLEG00000003226	TRNT1	98	66.588	ENSPMGG00000008888	trnt1	98	66.588	Periophthalmus_magnuspinnatus
ENSNLEG00000003226	TRNT1	100	93.548	ENSPEMG00000019845	Trnt1	100	93.548	Peromyscus_maniculatus_bairdii
ENSNLEG00000003226	TRNT1	100	84.562	ENSPCIG00000030436	TRNT1	100	84.562	Phascolarctos_cinereus
ENSNLEG00000003226	TRNT1	94	69.704	ENSPFOG00000006194	trnt1	95	69.704	Poecilia_formosa
ENSNLEG00000003226	TRNT1	94	69.704	ENSPLAG00000015623	trnt1	99	69.479	Poecilia_latipinna
ENSNLEG00000003226	TRNT1	94	69.704	ENSPMEG00000012216	trnt1	99	69.479	Poecilia_mexicana
ENSNLEG00000003226	TRNT1	94	69.024	ENSPREG00000021470	trnt1	96	69.024	Poecilia_reticulata
ENSNLEG00000003226	TRNT1	100	98.387	ENSPPYG00000013702	TRNT1	100	98.387	Pongo_abelii
ENSNLEG00000003226	TRNT1	88	93.473	ENSPCAG00000001951	TRNT1	100	93.473	Procavia_capensis
ENSNLEG00000003226	TRNT1	100	94.931	ENSPCOG00000022228	TRNT1	100	94.931	Propithecus_coquereli
ENSNLEG00000003226	TRNT1	88	93.490	ENSPVAG00000008784	TRNT1	100	93.490	Pteropus_vampyrus
ENSNLEG00000003226	TRNT1	98	68.075	ENSPNYG00000003120	trnt1	99	68.075	Pundamilia_nyererei
ENSNLEG00000003226	TRNT1	98	67.442	ENSPNAG00000000565	trnt1	99	67.442	Pygocentrus_nattereri
ENSNLEG00000003226	TRNT1	100	92.857	ENSRNOG00000006432	Trnt1	100	92.857	Rattus_norvegicus
ENSNLEG00000003226	TRNT1	100	95.392	ENSRBIG00000042632	TRNT1	100	95.392	Rhinopithecus_bieti
ENSNLEG00000003226	TRNT1	100	97.696	ENSRROG00000036866	TRNT1	100	97.696	Rhinopithecus_roxellana
ENSNLEG00000003226	TRNT1	100	97.465	ENSSBOG00000021208	TRNT1	100	97.465	Saimiri_boliviensis_boliviensis
ENSNLEG00000003226	TRNT1	100	84.332	ENSSHAG00000018861	TRNT1	100	84.332	Sarcophilus_harrisii
ENSNLEG00000003226	TRNT1	99	68.203	ENSSFOG00015020844	trnt1	94	71.358	Scleropages_formosus
ENSNLEG00000003226	TRNT1	98	67.294	ENSSMAG00000015432	trnt1	97	67.294	Scophthalmus_maximus
ENSNLEG00000003226	TRNT1	98	67.059	ENSSDUG00000012320	trnt1	99	67.059	Seriola_dumerili
ENSNLEG00000003226	TRNT1	56	65.145	ENSSLDG00000016463	-	96	62.846	Seriola_lalandi_dorsalis
ENSNLEG00000003226	TRNT1	98	67.059	ENSSLDG00000009325	trnt1	99	67.059	Seriola_lalandi_dorsalis
ENSNLEG00000003226	TRNT1	88	81.771	ENSSPUG00000014153	TRNT1	100	81.771	Sphenodon_punctatus
ENSNLEG00000003226	TRNT1	98	67.059	ENSSPAG00000021005	trnt1	99	67.059	Stegastes_partitus
ENSNLEG00000003226	TRNT1	100	93.548	ENSSSCG00000011529	TRNT1	100	93.548	Sus_scrofa
ENSNLEG00000003226	TRNT1	93	74.815	ENSTGUG00000010192	TRNT1	99	74.815	Taeniopygia_guttata
ENSNLEG00000003226	TRNT1	94	70.443	ENSTRUG00000001088	trnt1	95	70.443	Takifugu_rubripes
ENSNLEG00000003226	TRNT1	94	70.197	ENSTNIG00000007363	trnt1	94	70.197	Tetraodon_nigroviridis
ENSNLEG00000003226	TRNT1	70	78.652	ENSTBEG00000006367	TRNT1	100	78.652	Tupaia_belangeri
ENSNLEG00000003226	TRNT1	100	92.166	ENSTTRG00000007803	TRNT1	100	92.166	Tursiops_truncatus
ENSNLEG00000003226	TRNT1	100	92.166	ENSUAMG00000022574	TRNT1	99	92.166	Ursus_americanus
ENSNLEG00000003226	TRNT1	100	92.627	ENSUMAG00000024092	TRNT1	99	92.627	Ursus_maritimus
ENSNLEG00000003226	TRNT1	100	92.627	ENSVVUG00000012810	TRNT1	99	92.627	Vulpes_vulpes
ENSNLEG00000003226	TRNT1	95	64.904	ENSXETG00000025091	trnt1	99	65.920	Xenopus_tropicalis
ENSNLEG00000003226	TRNT1	94	69.951	ENSXCOG00000010150	trnt1	96	69.951	Xiphophorus_couchianus
ENSNLEG00000003226	TRNT1	94	69.458	ENSXMAG00000002227	trnt1	96	69.458	Xiphophorus_maculatus