EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000003566 (Gene tree)
Gene ID: 100589604
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 113941 bases
Position: chr2:64811146-64925086
Accession: 100589604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000004584	Not1	PF04054.15	1.4e-152	1	1
ENSNLEP00000040126	Not1	PF04054.15	2e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000045690	CNOT1-203	291	-	ENSNLEP00000042537	96 (aa)	-	A0A2I3HGB2
ENSNLET00000004822	CNOT1-201	8461	XM_003263115	ENSNLEP00000004584	2375 (aa)	XP_003263163	G1QUG4
ENSNLET00000052447	CNOT1-202	6981	-	ENSNLEP00000040126	2326 (aa)	-	A0A2I3H9G8

Gene Model

Click here to download ENSNLEG00000003566's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000003566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000003566	CNOT1	100	99.916	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSNLEG00000003566	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSNLEG00000003566	CNOT1	100	99.411	ENSAMEG00000017298	CNOT1	100	99.411	Ailuropoda_melanoleuca
ENSNLEG00000003566	CNOT1	90	90.117	ENSACIG00000016003	cnot1	100	90.350	Amphilophus_citrinellus
ENSNLEG00000003566	CNOT1	100	90.592	ENSAPEG00000022342	cnot1	100	90.508	Amphiprion_percula
ENSNLEG00000003566	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSNLEG00000003566	CNOT1	100	97.647	ENSAPLG00000007162	CNOT1	100	97.647	Anas_platyrhynchos
ENSNLEG00000003566	CNOT1	92	96.011	ENSACAG00000001602	CNOT1	98	96.243	Anolis_carolinensis
ENSNLEG00000003566	CNOT1	100	98.495	ENSANAG00000038198	CNOT1	100	98.495	Aotus_nancymaae
ENSNLEG00000003566	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSNLEG00000003566	CNOT1	100	91.288	ENSAMXG00000013170	cnot1	100	91.544	Astyanax_mexicanus
ENSNLEG00000003566	CNOT1	100	99.663	ENSBTAG00000020782	CNOT1	100	99.663	Bos_taurus
ENSNLEG00000003566	CNOT1	81	40.498	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSNLEG00000003566	CNOT1	100	99.790	ENSCJAG00000011318	CNOT1	100	99.790	Callithrix_jacchus
ENSNLEG00000003566	CNOT1	100	99.328	ENSCAFG00000008426	CNOT1	100	99.328	Canis_familiaris
ENSNLEG00000003566	CNOT1	100	99.656	ENSCAFG00020010156	CNOT1	100	99.656	Canis_lupus_dingo
ENSNLEG00000003566	CNOT1	100	99.663	ENSCHIG00000010452	CNOT1	100	99.663	Capra_hircus
ENSNLEG00000003566	CNOT1	100	99.828	ENSTSYG00000006888	CNOT1	100	99.828	Carlito_syrichta
ENSNLEG00000003566	CNOT1	100	94.949	ENSCPOG00000013026	CNOT1	100	94.949	Cavia_porcellus
ENSNLEG00000003566	CNOT1	100	98.280	ENSCCAG00000026333	CNOT1	100	98.280	Cebus_capucinus
ENSNLEG00000003566	CNOT1	100	99.914	ENSCATG00000032625	CNOT1	100	99.914	Cercocebus_atys
ENSNLEG00000003566	CNOT1	100	99.579	ENSCLAG00000006289	CNOT1	100	99.579	Chinchilla_lanigera
ENSNLEG00000003566	CNOT1	100	99.874	ENSCSAG00000004731	CNOT1	100	99.874	Chlorocebus_sabaeus
ENSNLEG00000003566	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSNLEG00000003566	CNOT1	98	95.968	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSNLEG00000003566	CNOT1	100	58.978	ENSCING00000009149	-	100	58.682	Ciona_intestinalis
ENSNLEG00000003566	CNOT1	89	63.101	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSNLEG00000003566	CNOT1	100	98.031	ENSCANG00000040534	CNOT1	100	98.031	Colobus_angolensis_palliatus
ENSNLEG00000003566	CNOT1	100	99.269	ENSCGRG00001016365	Cnot1	100	99.269	Cricetulus_griseus_chok1gshd
ENSNLEG00000003566	CNOT1	100	99.269	ENSCGRG00000001714	Cnot1	100	99.269	Cricetulus_griseus_crigri
ENSNLEG00000003566	CNOT1	100	83.104	ENSCVAG00000018930	cnot1	100	82.979	Cyprinodon_variegatus
ENSNLEG00000003566	CNOT1	100	89.979	ENSDARG00000004174	cnot1	100	89.853	Danio_rerio
ENSNLEG00000003566	CNOT1	100	97.139	ENSDNOG00000013250	CNOT1	100	97.139	Dasypus_novemcinctus
ENSNLEG00000003566	CNOT1	99	46.209	FBgn0085436	Not1	99	48.413	Drosophila_melanogaster
ENSNLEG00000003566	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSNLEG00000003566	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSNLEG00000003566	CNOT1	100	95.930	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSNLEG00000003566	CNOT1	100	99.705	ENSECAG00000009889	CNOT1	100	99.720	Equus_caballus
ENSNLEG00000003566	CNOT1	90	99.216	ENSEEUG00000006015	CNOT1	90	99.216	Erinaceus_europaeus
ENSNLEG00000003566	CNOT1	100	89.776	ENSELUG00000014085	cnot1	100	89.495	Esox_lucius
ENSNLEG00000003566	CNOT1	100	99.413	ENSFCAG00000025155	CNOT1	100	99.413	Felis_catus
ENSNLEG00000003566	CNOT1	100	97.685	ENSFALG00000007285	CNOT1	100	97.685	Ficedula_albicollis
ENSNLEG00000003566	CNOT1	100	99.527	ENSFDAG00000013399	CNOT1	100	99.527	Fukomys_damarensis
ENSNLEG00000003566	CNOT1	100	90.252	ENSFHEG00000020574	cnot1	100	90.336	Fundulus_heteroclitus
ENSNLEG00000003566	CNOT1	92	89.657	ENSGMOG00000012864	cnot1	100	90.028	Gadus_morhua
ENSNLEG00000003566	CNOT1	100	97.643	ENSGALG00000002301	CNOT1	100	97.643	Gallus_gallus
ENSNLEG00000003566	CNOT1	100	89.206	ENSGAFG00000015005	cnot1	100	89.206	Gambusia_affinis
ENSNLEG00000003566	CNOT1	92	90.496	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSNLEG00000003566	CNOT1	100	97.897	ENSGAGG00000022646	CNOT1	100	97.897	Gopherus_agassizii
ENSNLEG00000003566	CNOT1	100	99.874	ENSGGOG00000009547	CNOT1	100	99.874	Gorilla_gorilla
ENSNLEG00000003566	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSNLEG00000003566	CNOT1	100	99.441	ENSHGLG00000014322	CNOT1	100	99.441	Heterocephalus_glaber_female
ENSNLEG00000003566	CNOT1	100	89.460	ENSHCOG00000006501	cnot1	100	89.599	Hippocampus_comes
ENSNLEG00000003566	CNOT1	100	89.005	ENSIPUG00000011915	cnot1	100	89.383	Ictalurus_punctatus
ENSNLEG00000003566	CNOT1	100	99.527	ENSSTOG00000005490	CNOT1	100	99.527	Ictidomys_tridecemlineatus
ENSNLEG00000003566	CNOT1	100	98.968	ENSJJAG00000000633	Cnot1	100	98.968	Jaculus_jaculus
ENSNLEG00000003566	CNOT1	100	90.293	ENSKMAG00000006149	cnot1	100	90.327	Kryptolebias_marmoratus
ENSNLEG00000003566	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSNLEG00000003566	CNOT1	100	95.076	ENSLACG00000010869	CNOT1	100	94.697	Latimeria_chalumnae
ENSNLEG00000003566	CNOT1	100	93.076	ENSLOCG00000006324	cnot1	100	93.076	Lepisosteus_oculatus
ENSNLEG00000003566	CNOT1	100	99.453	ENSLAFG00000000098	CNOT1	100	99.453	Loxodonta_africana
ENSNLEG00000003566	CNOT1	100	99.914	ENSMFAG00000035888	CNOT1	100	99.914	Macaca_fascicularis
ENSNLEG00000003566	CNOT1	100	99.871	ENSMMUG00000014625	CNOT1	100	99.871	Macaca_mulatta
ENSNLEG00000003566	CNOT1	100	97.334	ENSMNEG00000031820	CNOT1	100	99.860	Macaca_nemestrina
ENSNLEG00000003566	CNOT1	100	98.710	ENSMLEG00000040933	CNOT1	100	98.710	Mandrillus_leucophaeus
ENSNLEG00000003566	CNOT1	100	89.253	ENSMAMG00000016524	cnot1	100	89.290	Mastacembelus_armatus
ENSNLEG00000003566	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSNLEG00000003566	CNOT1	100	97.475	ENSMGAG00000001908	CNOT1	100	97.475	Meleagris_gallopavo
ENSNLEG00000003566	CNOT1	100	99.527	ENSMICG00000007071	CNOT1	100	99.527	Microcebus_murinus
ENSNLEG00000003566	CNOT1	100	99.312	ENSMOCG00000017969	Cnot1	100	99.312	Microtus_ochrogaster
ENSNLEG00000003566	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSNLEG00000003566	CNOT1	100	97.897	ENSMODG00000014199	CNOT1	100	97.897	Monodelphis_domestica
ENSNLEG00000003566	CNOT1	100	90.336	ENSMALG00000008645	cnot1	100	90.336	Monopterus_albus
ENSNLEG00000003566	CNOT1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSNLEG00000003566	CNOT1	100	99.355	ENSMUSG00000036550	Cnot1	100	99.355	Mus_musculus
ENSNLEG00000003566	CNOT1	100	99.312	MGP_PahariEiJ_G0023028	Cnot1	100	99.312	Mus_pahari
ENSNLEG00000003566	CNOT1	100	99.355	MGP_SPRETEiJ_G0032549	Cnot1	100	99.355	Mus_spretus
ENSNLEG00000003566	CNOT1	100	99.705	ENSMPUG00000004830	CNOT1	100	99.705	Mustela_putorius_furo
ENSNLEG00000003566	CNOT1	100	99.032	ENSMLUG00000003728	CNOT1	100	99.032	Myotis_lucifugus
ENSNLEG00000003566	CNOT1	100	99.570	ENSNGAG00000018628	Cnot1	100	99.570	Nannospalax_galili
ENSNLEG00000003566	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSNLEG00000003566	CNOT1	87	98.210	ENSMEUG00000006145	CNOT1	87	98.210	Notamacropus_eugenii
ENSNLEG00000003566	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSNLEG00000003566	CNOT1	100	99.484	ENSODEG00000016337	CNOT1	100	99.484	Octodon_degus
ENSNLEG00000003566	CNOT1	100	90.658	ENSONIG00000007358	cnot1	100	90.293	Oreochromis_niloticus
ENSNLEG00000003566	CNOT1	92	98.229	ENSOANG00000012109	CNOT1	100	98.260	Ornithorhynchus_anatinus
ENSNLEG00000003566	CNOT1	100	99.621	ENSOCUG00000006911	CNOT1	100	99.621	Oryctolagus_cuniculus
ENSNLEG00000003566	CNOT1	100	90.394	ENSORLG00000013734	cnot1	100	90.432	Oryzias_latipes
ENSNLEG00000003566	CNOT1	100	90.819	ENSORLG00020017012	cnot1	100	90.488	Oryzias_latipes_hni
ENSNLEG00000003566	CNOT1	100	90.734	ENSORLG00015007091	cnot1	100	90.231	Oryzias_latipes_hsok
ENSNLEG00000003566	CNOT1	100	90.056	ENSOMEG00000015124	cnot1	100	90.352	Oryzias_melastigma
ENSNLEG00000003566	CNOT1	100	99.537	ENSOGAG00000000543	CNOT1	100	99.537	Otolemur_garnettii
ENSNLEG00000003566	CNOT1	100	99.663	ENSOARG00000001567	CNOT1	100	99.663	Ovis_aries
ENSNLEG00000003566	CNOT1	100	99.957	ENSPPAG00000022013	CNOT1	100	99.957	Pan_paniscus
ENSNLEG00000003566	CNOT1	100	99.705	ENSPPRG00000004867	CNOT1	100	99.705	Panthera_pardus
ENSNLEG00000003566	CNOT1	100	99.705	ENSPTIG00000012589	CNOT1	100	99.705	Panthera_tigris_altaica
ENSNLEG00000003566	CNOT1	100	99.957	ENSPTRG00000008183	CNOT1	100	99.957	Pan_troglodytes
ENSNLEG00000003566	CNOT1	100	96.312	ENSPANG00000020901	CNOT1	100	96.312	Papio_anubis
ENSNLEG00000003566	CNOT1	100	92.107	ENSPKIG00000023538	CNOT1	100	92.275	Paramormyrops_kingsleyae
ENSNLEG00000003566	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSNLEG00000003566	CNOT1	100	97.769	ENSPSIG00000005499	CNOT1	100	97.769	Pelodiscus_sinensis
ENSNLEG00000003566	CNOT1	100	81.082	ENSPMAG00000009381	cnot1	100	80.982	Petromyzon_marinus
ENSNLEG00000003566	CNOT1	100	97.766	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSNLEG00000003566	CNOT1	99	89.901	ENSPFOG00000003497	cnot1	100	89.814	Poecilia_formosa
ENSNLEG00000003566	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSNLEG00000003566	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSNLEG00000003566	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSNLEG00000003566	CNOT1	100	99.874	ENSPPYG00000007410	CNOT1	100	99.874	Pongo_abelii
ENSNLEG00000003566	CNOT1	90	97.359	ENSPCAG00000003241	CNOT1	90	97.359	Procavia_capensis
ENSNLEG00000003566	CNOT1	100	99.570	ENSPCOG00000027139	CNOT1	100	99.570	Propithecus_coquereli
ENSNLEG00000003566	CNOT1	100	97.096	ENSPVAG00000004243	CNOT1	100	97.096	Pteropus_vampyrus
ENSNLEG00000003566	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSNLEG00000003566	CNOT1	100	89.983	ENSPNAG00000000246	cnot1	100	90.404	Pygocentrus_nattereri
ENSNLEG00000003566	CNOT1	100	99.242	ENSRNOG00000012271	Cnot1	100	99.242	Rattus_norvegicus
ENSNLEG00000003566	CNOT1	100	97.807	ENSRBIG00000044598	CNOT1	100	97.807	Rhinopithecus_bieti
ENSNLEG00000003566	CNOT1	100	99.914	ENSRROG00000000906	CNOT1	100	99.914	Rhinopithecus_roxellana
ENSNLEG00000003566	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSNLEG00000003566	CNOT1	100	95.626	ENSSBOG00000029155	CNOT1	100	95.626	Saimiri_boliviensis_boliviensis
ENSNLEG00000003566	CNOT1	100	98.066	ENSSHAG00000012187	CNOT1	100	98.066	Sarcophilus_harrisii
ENSNLEG00000003566	CNOT1	100	92.634	ENSSFOG00015017614	cnot1	100	92.374	Scleropages_formosus
ENSNLEG00000003566	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSNLEG00000003566	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSNLEG00000003566	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSNLEG00000003566	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSNLEG00000003566	CNOT1	100	90.680	ENSSPAG00000018802	cnot1	100	90.428	Stegastes_partitus
ENSNLEG00000003566	CNOT1	100	99.537	ENSSSCG00000002799	CNOT1	100	99.537	Sus_scrofa
ENSNLEG00000003566	CNOT1	100	97.562	ENSTGUG00000005919	CNOT1	100	97.562	Taeniopygia_guttata
ENSNLEG00000003566	CNOT1	100	89.070	ENSTNIG00000018706	cnot1	100	88.954	Tetraodon_nigroviridis
ENSNLEG00000003566	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSNLEG00000003566	CNOT1	95	99.476	ENSTTRG00000008460	CNOT1	95	99.476	Tursiops_truncatus
ENSNLEG00000003566	CNOT1	100	99.705	ENSUAMG00000009251	CNOT1	100	99.705	Ursus_americanus
ENSNLEG00000003566	CNOT1	100	99.705	ENSUMAG00000021291	CNOT1	100	99.705	Ursus_maritimus
ENSNLEG00000003566	CNOT1	97	97.099	ENSVPAG00000008846	CNOT1	97	97.099	Vicugna_pacos
ENSNLEG00000003566	CNOT1	100	98.574	ENSVVUG00000024037	CNOT1	100	99.202	Vulpes_vulpes
ENSNLEG00000003566	CNOT1	100	90.260	ENSXETG00000015900	cnot1	100	90.008	Xenopus_tropicalis
ENSNLEG00000003566	CNOT1	100	89.374	ENSXCOG00000013552	cnot1	100	89.374	Xiphophorus_couchianus
ENSNLEG00000003566	CNOT1	100	89.416	ENSXMAG00000006031	cnot1	100	89.416	Xiphophorus_maculatus