EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000003569 (Gene tree)
Gene ID: 100605877
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 63989 bases
Position: chr25:18205758-18269746
Accession: 100605877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000047294	RRM_1	PF00076.22	3.6e-09	1	1
ENSNLEP00000004401	RRM_1	PF00076.22	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000054251	SCAF4-202	4180	XM_003263852	ENSNLEP00000047294	1132 (aa)	XP_003263900	A0A2I3HUK4
ENSNLET00000004634	SCAF4-201	4259	XM_003263850	ENSNLEP00000004401	1147 (aa)	XP_003263898	G1QTY1

Gene Model

Click here to download ENSNLEG00000003569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000003569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000003569	SCAF4	100	99.303	ENSG00000156304	SCAF4	100	99.303	Homo_sapiens
ENSNLEG00000003569	SCAF4	73	93.622	ENSAMEG00000014987	SCAF4	96	94.344	Ailuropoda_melanoleuca
ENSNLEG00000003569	SCAF4	99	75.413	ENSAPLG00000002509	SCAF4	59	83.002	Anas_platyrhynchos
ENSNLEG00000003569	SCAF4	100	63.458	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSNLEG00000003569	SCAF4	100	98.261	ENSANAG00000037494	SCAF4	100	98.261	Aotus_nancymaae
ENSNLEG00000003569	SCAF4	93	49.642	ENSAMXG00000008585	scaf4a	60	63.253	Astyanax_mexicanus
ENSNLEG00000003569	SCAF4	100	92.602	ENSBTAG00000018855	SCAF4	100	91.993	Bos_taurus
ENSNLEG00000003569	SCAF4	100	98.261	ENSCJAG00000008993	SCAF4	100	98.261	Callithrix_jacchus
ENSNLEG00000003569	SCAF4	99	94.381	ENSCAFG00000008863	SCAF4	99	94.381	Canis_familiaris
ENSNLEG00000003569	SCAF4	99	91.174	ENSCAFG00020026019	SCAF4	100	93.990	Canis_lupus_dingo
ENSNLEG00000003569	SCAF4	100	92.108	ENSCHIG00000008385	SCAF4	100	91.500	Capra_hircus
ENSNLEG00000003569	SCAF4	91	96.141	ENSTSYG00000011344	SCAF4	99	96.141	Carlito_syrichta
ENSNLEG00000003569	SCAF4	100	89.138	ENSCPOG00000012443	SCAF4	100	90.172	Cavia_porcellus
ENSNLEG00000003569	SCAF4	100	98.345	ENSCCAG00000033727	SCAF4	100	98.345	Cebus_capucinus
ENSNLEG00000003569	SCAF4	100	98.092	ENSCATG00000030379	SCAF4	100	98.092	Cercocebus_atys
ENSNLEG00000003569	SCAF4	99	90.972	ENSCLAG00000006298	SCAF4	100	91.840	Chinchilla_lanigera
ENSNLEG00000003569	SCAF4	100	98.349	ENSCSAG00000009438	SCAF4	100	98.349	Chlorocebus_sabaeus
ENSNLEG00000003569	SCAF4	100	98.779	ENSCANG00000029847	SCAF4	100	98.779	Colobus_angolensis_palliatus
ENSNLEG00000003569	SCAF4	99	83.264	ENSCGRG00001020821	Scaf4	100	83.016	Cricetulus_griseus_chok1gshd
ENSNLEG00000003569	SCAF4	99	83.042	ENSCGRG00000014360	Scaf4	100	82.544	Cricetulus_griseus_crigri
ENSNLEG00000003569	SCAF4	79	52.229	ENSCSEG00000019549	scaf4a	53	54.697	Cynoglossus_semilaevis
ENSNLEG00000003569	SCAF4	58	56.849	ENSCSEG00000012808	-	61	60.500	Cynoglossus_semilaevis
ENSNLEG00000003569	SCAF4	100	90.584	ENSDNOG00000019014	SCAF4	94	90.584	Dasypus_novemcinctus
ENSNLEG00000003569	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSNLEG00000003569	SCAF4	100	94.071	ENSEASG00005007756	SCAF4	100	93.984	Equus_asinus_asinus
ENSNLEG00000003569	SCAF4	100	93.723	ENSECAG00000014248	SCAF4	100	94.071	Equus_caballus
ENSNLEG00000003569	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSNLEG00000003569	SCAF4	100	93.858	ENSFCAG00000002228	SCAF4	100	93.858	Felis_catus
ENSNLEG00000003569	SCAF4	99	89.828	ENSFDAG00000017780	SCAF4	100	89.655	Fukomys_damarensis
ENSNLEG00000003569	SCAF4	100	76.537	ENSGALG00000033965	SCAF4	59	83.232	Gallus_gallus
ENSNLEG00000003569	SCAF4	70	55.013	ENSGACG00000020580	scaf4a	54	70.122	Gasterosteus_aculeatus
ENSNLEG00000003569	SCAF4	91	98.107	ENSGGOG00000015557	SCAF4	100	99.543	Gorilla_gorilla
ENSNLEG00000003569	SCAF4	100	91.042	ENSHGLG00000010582	SCAF4	100	91.301	Heterocephalus_glaber_female
ENSNLEG00000003569	SCAF4	99	90.933	ENSHGLG00100009441	SCAF4	100	91.194	Heterocephalus_glaber_male
ENSNLEG00000003569	SCAF4	69	49.770	ENSIPUG00000011285	scaf4	63	63.514	Ictalurus_punctatus
ENSNLEG00000003569	SCAF4	99	87.811	ENSSTOG00000004450	SCAF4	100	88.612	Ictidomys_tridecemlineatus
ENSNLEG00000003569	SCAF4	99	89.289	ENSJJAG00000019447	Scaf4	99	89.201	Jaculus_jaculus
ENSNLEG00000003569	SCAF4	98	60.526	ENSLACG00000013913	SCAF4	59	69.436	Latimeria_chalumnae
ENSNLEG00000003569	SCAF4	95	57.780	ENSLOCG00000009162	scaf4a	59	67.804	Lepisosteus_oculatus
ENSNLEG00000003569	SCAF4	99	92.799	ENSLAFG00000010710	SCAF4	100	91.769	Loxodonta_africana
ENSNLEG00000003569	SCAF4	100	98.095	ENSMFAG00000037668	SCAF4	100	98.095	Macaca_fascicularis
ENSNLEG00000003569	SCAF4	100	98.009	ENSMMUG00000001712	SCAF4	100	98.009	Macaca_mulatta
ENSNLEG00000003569	SCAF4	100	97.924	ENSMNEG00000032966	SCAF4	100	97.924	Macaca_nemestrina
ENSNLEG00000003569	SCAF4	99	98.163	ENSMLEG00000039674	SCAF4	100	98.163	Mandrillus_leucophaeus
ENSNLEG00000003569	SCAF4	99	76.368	ENSMGAG00000014515	SCAF4	59	83.153	Meleagris_gallopavo
ENSNLEG00000003569	SCAF4	99	88.282	ENSMAUG00000013307	Scaf4	100	88.194	Mesocricetus_auratus
ENSNLEG00000003569	SCAF4	100	97.036	ENSMICG00000005256	SCAF4	100	97.036	Microcebus_murinus
ENSNLEG00000003569	SCAF4	100	85.355	ENSMOCG00000012087	Scaf4	97	91.569	Microtus_ochrogaster
ENSNLEG00000003569	SCAF4	100	84.696	ENSMODG00000021040	SCAF4	100	83.826	Monodelphis_domestica
ENSNLEG00000003569	SCAF4	100	83.510	MGP_CAROLIEiJ_G0020944	Scaf4	96	90.206	Mus_caroli
ENSNLEG00000003569	SCAF4	100	83.633	ENSMUSG00000022983	Scaf4	96	89.909	Mus_musculus
ENSNLEG00000003569	SCAF4	100	83.117	MGP_PahariEiJ_G0016649	Scaf4	97	88.550	Mus_pahari
ENSNLEG00000003569	SCAF4	100	84.319	MGP_SPRETEiJ_G0021850	Scaf4	100	84.154	Mus_spretus
ENSNLEG00000003569	SCAF4	100	92.381	ENSMPUG00000001078	SCAF4	100	92.294	Mustela_putorius_furo
ENSNLEG00000003569	SCAF4	99	77.556	ENSMLUG00000011472	SCAF4	79	83.099	Myotis_lucifugus
ENSNLEG00000003569	SCAF4	99	91.674	ENSNGAG00000005214	Scaf4	99	91.339	Nannospalax_galili
ENSNLEG00000003569	SCAF4	78	90.761	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSNLEG00000003569	SCAF4	100	89.316	ENSODEG00000002718	SCAF4	100	89.060	Octodon_degus
ENSNLEG00000003569	SCAF4	71	58.629	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSNLEG00000003569	SCAF4	100	89.014	ENSOCUG00000008336	SCAF4	100	89.100	Oryctolagus_cuniculus
ENSNLEG00000003569	SCAF4	52	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSNLEG00000003569	SCAF4	99	89.236	ENSOGAG00000014653	SCAF4	94	95.208	Otolemur_garnettii
ENSNLEG00000003569	SCAF4	99	91.536	ENSOARG00000013894	SCAF4	99	90.617	Ovis_aries
ENSNLEG00000003569	SCAF4	100	99.303	ENSPPAG00000028535	SCAF4	100	99.303	Pan_paniscus
ENSNLEG00000003569	SCAF4	99	93.881	ENSPPRG00000000635	SCAF4	100	93.881	Panthera_pardus
ENSNLEG00000003569	SCAF4	99	91.117	ENSPTIG00000021578	SCAF4	99	89.220	Panthera_tigris_altaica
ENSNLEG00000003569	SCAF4	100	99.303	ENSPTRG00000013848	SCAF4	100	99.303	Pan_troglodytes
ENSNLEG00000003569	SCAF4	100	98.095	ENSPANG00000017332	SCAF4	100	98.095	Papio_anubis
ENSNLEG00000003569	SCAF4	64	64.248	ENSPKIG00000022408	scaf4a	90	66.816	Paramormyrops_kingsleyae
ENSNLEG00000003569	SCAF4	99	77.145	ENSPSIG00000014242	SCAF4	57	84.211	Pelodiscus_sinensis
ENSNLEG00000003569	SCAF4	61	86.944	ENSPCIG00000028183	SCAF4	91	81.794	Phascolarctos_cinereus
ENSNLEG00000003569	SCAF4	100	99.477	ENSPPYG00000011355	SCAF4	100	99.477	Pongo_abelii
ENSNLEG00000003569	SCAF4	100	95.830	ENSPCOG00000018710	SCAF4	100	95.917	Propithecus_coquereli
ENSNLEG00000003569	SCAF4	100	93.025	ENSPVAG00000005220	SCAF4	100	92.589	Pteropus_vampyrus
ENSNLEG00000003569	SCAF4	76	57.705	ENSPNAG00000016892	scaf4a	60	63.922	Pygocentrus_nattereri
ENSNLEG00000003569	SCAF4	98	86.933	ENSRNOG00000002104	Scaf4	96	85.323	Rattus_norvegicus
ENSNLEG00000003569	SCAF4	99	95.877	ENSRBIG00000040007	SCAF4	99	95.877	Rhinopithecus_bieti
ENSNLEG00000003569	SCAF4	100	98.779	ENSRROG00000029488	SCAF4	100	98.779	Rhinopithecus_roxellana
ENSNLEG00000003569	SCAF4	100	84.059	ENSSHAG00000001581	SCAF4	100	82.927	Sarcophilus_harrisii
ENSNLEG00000003569	SCAF4	89	47.025	ENSSFOG00015006338	scaf4a	54	58.226	Scleropages_formosus
ENSNLEG00000003569	SCAF4	65	58.781	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSNLEG00000003569	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSNLEG00000003569	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSNLEG00000003569	SCAF4	100	88.831	ENSSARG00000009994	SCAF4	100	88.918	Sorex_araneus
ENSNLEG00000003569	SCAF4	100	90.336	ENSSSCG00000021023	SCAF4	100	90.509	Sus_scrofa
ENSNLEG00000003569	SCAF4	74	80.737	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSNLEG00000003569	SCAF4	51	58.451	ENSTRUG00000009536	-	65	57.818	Takifugu_rubripes
ENSNLEG00000003569	SCAF4	99	92.524	ENSTTRG00000010963	SCAF4	100	92.084	Tursiops_truncatus
ENSNLEG00000003569	SCAF4	100	92.515	ENSUAMG00000008860	SCAF4	100	92.515	Ursus_americanus
ENSNLEG00000003569	SCAF4	99	90.909	ENSUMAG00000016962	SCAF4	100	91.615	Ursus_maritimus
ENSNLEG00000003569	SCAF4	99	94.621	ENSVVUG00000002953	SCAF4	100	94.621	Vulpes_vulpes
ENSNLEG00000003569	SCAF4	99	55.796	ENSXETG00000007351	scaf4	63	66.476	Xenopus_tropicalis