EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000004214 (Gene tree)
Gene ID: 100598459
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 6458 bases
Position: chr21:58128355-58134812
Accession: 100598459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000041874	PseudoU_synth_2	PF00849.22	8.9e-19	1	1
ENSNLEP00000005099	PseudoU_synth_2	PF00849.22	1.1e-18	1	1
ENSNLEP00000044181	PseudoU_synth_2	PF00849.22	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000037414	RPUSD3-202	861	-	ENSNLEP00000044181	286 (aa)	-	A0A2I3HL51
ENSNLET00000045473	RPUSD3-203	639	-	ENSNLEP00000041874	212 (aa)	-	A0A2I3HE05
ENSNLET00000005359	RPUSD3-201	906	XM_003264954	ENSNLEP00000005099	301 (aa)	XP_003265002	G1QVX8

Gene Model

Click here to download ENSNLEG00000004214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000004214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000004214	RPUSD3	100	97.170	ENSG00000156990	RPUSD3	100	97.170	Homo_sapiens
ENSNLEG00000004214	RPUSD3	95	82.673	ENSAMEG00000016227	RPUSD3	100	66.477	Ailuropoda_melanoleuca
ENSNLEG00000004214	RPUSD3	83	55.114	ENSACAG00000009836	RPUSD3	50	55.114	Anolis_carolinensis
ENSNLEG00000004214	RPUSD3	99	81.340	ENSANAG00000038118	-	98	81.340	Aotus_nancymaae
ENSNLEG00000004214	RPUSD3	99	66.986	ENSANAG00000007127	-	100	66.986	Aotus_nancymaae
ENSNLEG00000004214	RPUSD3	91	90.155	ENSANAG00000019945	-	78	90.155	Aotus_nancymaae
ENSNLEG00000004214	RPUSD3	95	84.158	ENSBTAG00000007968	RPUSD3	100	67.442	Bos_taurus
ENSNLEG00000004214	RPUSD3	95	81.188	ENSCAFG00000029733	RPUSD3	100	66.193	Canis_familiaris
ENSNLEG00000004214	RPUSD3	96	80.976	ENSCAFG00020008582	RPUSD3	100	66.193	Canis_lupus_dingo
ENSNLEG00000004214	RPUSD3	95	82.178	ENSCHIG00000026027	RPUSD3	100	66.860	Capra_hircus
ENSNLEG00000004214	RPUSD3	99	76.887	ENSTSYG00000009994	RPUSD3	96	77.830	Carlito_syrichta
ENSNLEG00000004214	RPUSD3	73	82.468	ENSCAPG00000017559	RPUSD3	98	65.000	Cavia_aperea
ENSNLEG00000004214	RPUSD3	73	83.117	ENSCPOG00000037956	RPUSD3	86	57.229	Cavia_porcellus
ENSNLEG00000004214	RPUSD3	100	91.038	ENSCCAG00000029530	RPUSD3	100	91.038	Cebus_capucinus
ENSNLEG00000004214	RPUSD3	100	94.811	ENSCATG00000036939	RPUSD3	100	94.811	Cercocebus_atys
ENSNLEG00000004214	RPUSD3	95	93.532	ENSCSAG00000010506	RPUSD3	100	77.208	Chlorocebus_sabaeus
ENSNLEG00000004214	RPUSD3	56	84.821	ENSCHOG00000010151	-	64	84.821	Choloepus_hoffmanni
ENSNLEG00000004214	RPUSD3	70	54.667	ENSCPBG00000008825	RPUSD3	61	54.037	Chrysemys_picta_bellii
ENSNLEG00000004214	RPUSD3	100	94.340	ENSCANG00000040711	RPUSD3	100	94.340	Colobus_angolensis_palliatus
ENSNLEG00000004214	RPUSD3	95	72.277	ENSCGRG00001004923	Rpusd3	96	59.654	Cricetulus_griseus_chok1gshd
ENSNLEG00000004214	RPUSD3	95	72.277	ENSCGRG00000018315	Rpusd3	97	60.534	Cricetulus_griseus_crigri
ENSNLEG00000004214	RPUSD3	95	78.218	ENSDNOG00000039160	RPUSD3	93	62.571	Dasypus_novemcinctus
ENSNLEG00000004214	RPUSD3	72	74.534	ENSDORG00000026827	Rpusd3	92	61.940	Dipodomys_ordii
ENSNLEG00000004214	RPUSD3	95	73.762	ENSETEG00000006538	RPUSD3	99	61.080	Echinops_telfairi
ENSNLEG00000004214	RPUSD3	81	37.931	ENSEBUG00000015605	RPUSD3	57	37.931	Eptatretus_burgeri
ENSNLEG00000004214	RPUSD3	94	83.582	ENSEASG00005014160	RPUSD3	97	68.481	Equus_asinus_asinus
ENSNLEG00000004214	RPUSD3	94	84.577	ENSECAG00000019988	RPUSD3	97	69.054	Equus_caballus
ENSNLEG00000004214	RPUSD3	91	53.093	ENSEEUG00000007353	RPUSD3	96	46.313	Erinaceus_europaeus
ENSNLEG00000004214	RPUSD3	94	84.000	ENSFCAG00000014199	RPUSD3	100	66.761	Felis_catus
ENSNLEG00000004214	RPUSD3	77	48.795	ENSFALG00000012968	RPUSD3	99	38.868	Ficedula_albicollis
ENSNLEG00000004214	RPUSD3	73	85.161	ENSFDAG00000008350	RPUSD3	81	65.649	Fukomys_damarensis
ENSNLEG00000004214	RPUSD3	73	55.128	ENSGAGG00000007493	RPUSD3	54	54.491	Gopherus_agassizii
ENSNLEG00000004214	RPUSD3	100	98.113	ENSGGOG00000013120	RPUSD3	100	98.113	Gorilla_gorilla
ENSNLEG00000004214	RPUSD3	87	79.348	ENSHGLG00000011722	RPUSD3	98	54.922	Heterocephalus_glaber_female
ENSNLEG00000004214	RPUSD3	87	79.348	ENSHGLG00100016038	RPUSD3	98	54.922	Heterocephalus_glaber_male
ENSNLEG00000004214	RPUSD3	95	82.673	ENSSTOG00000002125	RPUSD3	99	65.903	Ictidomys_tridecemlineatus
ENSNLEG00000004214	RPUSD3	95	75.243	ENSJJAG00000012679	Rpusd3	99	61.471	Jaculus_jaculus
ENSNLEG00000004214	RPUSD3	94	83.500	ENSLAFG00000017501	RPUSD3	100	67.151	Loxodonta_africana
ENSNLEG00000004214	RPUSD3	95	94.030	ENSMFAG00000032407	RPUSD3	100	77.778	Macaca_fascicularis
ENSNLEG00000004214	RPUSD3	97	94.146	ENSMMUG00000010628	RPUSD3	92	94.146	Macaca_mulatta
ENSNLEG00000004214	RPUSD3	95	94.030	ENSMNEG00000040308	RPUSD3	100	77.778	Macaca_nemestrina
ENSNLEG00000004214	RPUSD3	100	95.283	ENSMLEG00000033940	RPUSD3	100	95.283	Mandrillus_leucophaeus
ENSNLEG00000004214	RPUSD3	92	77.157	ENSMAUG00000015473	Rpusd3	97	62.687	Mesocricetus_auratus
ENSNLEG00000004214	RPUSD3	99	82.938	ENSMICG00000002315	RPUSD3	98	82.938	Microcebus_murinus
ENSNLEG00000004214	RPUSD3	95	72.772	ENSMOCG00000022613	Rpusd3	97	60.534	Microtus_ochrogaster
ENSNLEG00000004214	RPUSD3	95	54.680	ENSMODG00000005210	RPUSD3	90	45.170	Monodelphis_domestica
ENSNLEG00000004214	RPUSD3	96	72.195	MGP_CAROLIEiJ_G0028725	Rpusd3	97	64.444	Mus_caroli
ENSNLEG00000004214	RPUSD3	96	71.707	ENSMUSG00000051169	Rpusd3	96	64.607	Mus_musculus
ENSNLEG00000004214	RPUSD3	92	75.127	MGP_PahariEiJ_G0022476	Rpusd3	97	65.556	Mus_pahari
ENSNLEG00000004214	RPUSD3	96	70.732	MGP_SPRETEiJ_G0029753	Rpusd3	96	63.483	Mus_spretus
ENSNLEG00000004214	RPUSD3	94	80.000	ENSMPUG00000017132	RPUSD3	99	64.756	Mustela_putorius_furo
ENSNLEG00000004214	RPUSD3	95	85.149	ENSMLUG00000006135	RPUSD3	99	69.971	Myotis_lucifugus
ENSNLEG00000004214	RPUSD3	92	77.665	ENSNGAG00000023704	Rpusd3	95	64.174	Nannospalax_galili
ENSNLEG00000004214	RPUSD3	73	66.452	ENSMEUG00000013098	-	100	52.490	Notamacropus_eugenii
ENSNLEG00000004214	RPUSD3	82	70.312	ENSOPRG00000002300	RPUSD3	72	70.312	Ochotona_princeps
ENSNLEG00000004214	RPUSD3	73	79.870	ENSODEG00000018137	RPUSD3	90	63.985	Octodon_degus
ENSNLEG00000004214	RPUSD3	84	52.247	ENSOANG00000012081	-	62	52.247	Ornithorhynchus_anatinus
ENSNLEG00000004214	RPUSD3	89	80.000	ENSOCUG00000027885	RPUSD3	99	62.899	Oryctolagus_cuniculus
ENSNLEG00000004214	RPUSD3	95	84.236	ENSOGAG00000012592	RPUSD3	100	70.382	Otolemur_garnettii
ENSNLEG00000004214	RPUSD3	95	84.653	ENSOARG00000005928	RPUSD3	99	67.806	Ovis_aries
ENSNLEG00000004214	RPUSD3	100	96.226	ENSPPAG00000038083	RPUSD3	100	96.226	Pan_paniscus
ENSNLEG00000004214	RPUSD3	94	83.500	ENSPPRG00000024433	RPUSD3	100	66.761	Panthera_pardus
ENSNLEG00000004214	RPUSD3	94	84.500	ENSPTIG00000006828	RPUSD3	100	67.151	Panthera_tigris_altaica
ENSNLEG00000004214	RPUSD3	100	97.170	ENSPTRG00000051760	RPUSD3	100	97.170	Pan_troglodytes
ENSNLEG00000004214	RPUSD3	100	95.283	ENSPANG00000023885	RPUSD3	100	95.283	Papio_anubis
ENSNLEG00000004214	RPUSD3	95	72.772	ENSPEMG00000017245	Rpusd3	100	59.884	Peromyscus_maniculatus_bairdii
ENSNLEG00000004214	RPUSD3	85	64.286	ENSPCIG00000021901	RPUSD3	97	47.788	Phascolarctos_cinereus
ENSNLEG00000004214	RPUSD3	95	97.015	ENSPPYG00000013676	RPUSD3	100	80.571	Pongo_abelii
ENSNLEG00000004214	RPUSD3	95	59.406	ENSPCAG00000013731	-	85	55.510	Procavia_capensis
ENSNLEG00000004214	RPUSD3	95	87.129	ENSPCOG00000018314	RPUSD3	100	71.591	Propithecus_coquereli
ENSNLEG00000004214	RPUSD3	95	83.663	ENSPVAG00000011107	RPUSD3	100	66.477	Pteropus_vampyrus
ENSNLEG00000004214	RPUSD3	91	66.321	ENSRNOG00000009084	Rpusd3	98	58.462	Rattus_norvegicus
ENSNLEG00000004214	RPUSD3	100	95.283	ENSRBIG00000041230	RPUSD3	100	95.283	Rhinopithecus_bieti
ENSNLEG00000004214	RPUSD3	100	95.283	ENSRROG00000043328	RPUSD3	100	95.283	Rhinopithecus_roxellana
ENSNLEG00000004214	RPUSD3	95	92.537	ENSSBOG00000036106	RPUSD3	100	76.353	Saimiri_boliviensis_boliviensis
ENSNLEG00000004214	RPUSD3	95	57.921	ENSSHAG00000015536	RPUSD3	66	57.843	Sarcophilus_harrisii
ENSNLEG00000004214	RPUSD3	95	82.178	ENSSSCG00000011555	RPUSD3	100	67.330	Sus_scrofa
ENSNLEG00000004214	RPUSD3	73	49.677	ENSTGUG00000008744	RPUSD3	71	49.091	Taeniopygia_guttata
ENSNLEG00000004214	RPUSD3	95	81.683	ENSTBEG00000000176	RPUSD3	88	75.397	Tupaia_belangeri
ENSNLEG00000004214	RPUSD3	95	84.236	ENSTTRG00000007544	RPUSD3	100	67.614	Tursiops_truncatus
ENSNLEG00000004214	RPUSD3	96	81.951	ENSUAMG00000011354	RPUSD3	98	66.561	Ursus_americanus
ENSNLEG00000004214	RPUSD3	95	82.178	ENSUMAG00000018830	RPUSD3	100	65.625	Ursus_maritimus
ENSNLEG00000004214	RPUSD3	99	81.604	ENSVVUG00000023735	RPUSD3	90	81.604	Vulpes_vulpes
ENSNLEG00000004214	RPUSD3	81	49.133	ENSXETG00000023546	rpusd3	99	40.426	Xenopus_tropicalis