EuRBPDB

Description
Ensembl ID
ENSNLEG00000004248 (Gene tree)
Gene ID
100586736
Gene Symbol
DDX42
Alias
RHELP|RNAHP|SF3B8|SF3b125
Full Name
DEAD-box helicase 42
Gene Type
protein_coding
Species
Nomascus_leucogenys
Status
putative
Strand
Minus strand
Length
47964 bases
Position
chr19:27849906-27897869
Accession
100586736
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSNLEP00000025407ResIIIPF04851.158.5e-0711
ENSNLEP00000027139ResIIIPF04851.158.5e-0711
ENSNLEP00000036115ResIIIPF04851.158.7e-0711
ENSNLEP00000035836ResIIIPF04851.158.7e-0711
ENSNLEP00000005233ResIIIPF04851.158.8e-0711
ENSNLEP00000035836DEADPF00270.294e-5011
ENSNLEP00000027139DEADPF00270.298.4e-5011
ENSNLEP00000036115DEADPF00270.298.6e-5011
ENSNLEP00000005233DEADPF00270.298.7e-5011
ENSNLEP00000025407DEADPF00270.299.5e-5011
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSNLET00000049036DDX42-2052757-ENSNLEP00000025407918 (aa)-A0A2I3FXC5
ENSNLET00000048763DDX42-2032802-ENSNLEP00000036115933 (aa)-A0A2I3GXZ9
ENSNLET00000048888DDX42-2012106-ENSNLEP00000035836701 (aa)-A0A2I3GX01
ENSNLET00000049354DDX42-2042778-ENSNLEP00000027139925 (aa)-A0A2I3G5Z2
ENSNLET00000005506DDX42-2024006XM_003270677ENSNLEP00000005233938 (aa)XP_003270725G1QWB2
Gene Model
Pathways
Pathway ID
Pathway Name
Source
nle03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSNLEG00000004248DDX425530.287ENSNLEG00000015595EIF4A39030.729
ENSNLEG00000004248DDX425033.333ENSNLEG00000011591DDX215033.333
ENSNLEG00000004248DDX426442.266ENSNLEG00000015117DDX178743.750
ENSNLEG00000004248DDX425534.328ENSNLEG00000006136DDX497834.328
ENSNLEG00000004248DDX425635.797ENSNLEG00000017864DDX235535.797
ENSNLEG00000004248DDX425132.345ENSNLEG00000011769DDX185531.854
ENSNLEG00000004248DDX425032.703ENSNLEG00000001658DDX556132.973
ENSNLEG00000004248DDX425737.923ENSNLEG00000001662DDX47537.303
ENSNLEG00000004248DDX425636.496ENSNLEG00000001876DDX3X7434.286
ENSNLEG00000004248DDX425037.921ENSNLEG00000003605DDX477637.921
ENSNLEG00000004248DDX426130.296ENSNLEG00000012844DDX416630.068
ENSNLEG00000004248DDX425032.791ENSNLEG00000011631DDX505032.791
ENSNLEG00000004248DDX427738.061ENSNLEG00000014929DDX58441.042
ENSNLEG00000004248DDX426533.261ENSNLEG00000018069DDX597333.261
ENSNLEG00000004248DDX425130.769ENSNLEG00000007372DDX67530.319
ENSNLEG00000004248DDX426337.389ENSNLEG00000001209DDX436837.389
ENSNLEG00000004248DDX425533.753ENSNLEG00000002826DDX526534.000
ENSNLEG00000004248DDX425130.110ENSNLEG00000009547EIF4A18830.110
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSNLEG00000004248DDX4210099.467ENSG00000198231DDX42100100.000Homo_sapiens
ENSNLEG00000004248DDX429977.195ENSAPOG00000017675ddx429873.754Acanthochromis_polyacanthus
ENSNLEG00000004248DDX429997.989ENSAMEG00000003200DDX4210096.578Ailuropoda_melanoleuca
ENSNLEG00000004248DDX429181.522ENSACIG00000007376ddx429972.440Amphilophus_citrinellus
ENSNLEG00000004248DDX429977.511ENSAOCG00000003520ddx429972.487Amphiprion_ocellaris
ENSNLEG00000004248DDX429481.543ENSAPEG00000000984ddx429972.582Amphiprion_percula
ENSNLEG00000004248DDX429180.835ENSATEG00000022920ddx429972.737Anabas_testudineus
ENSNLEG00000004248DDX429990.571ENSAPLG00000010544DDX4210084.632Anas_platyrhynchos
ENSNLEG00000004248DDX429988.953ENSACAG00000003994DDX429984.936Anolis_carolinensis
ENSNLEG00000004248DDX429999.568ENSANAG00000035693DDX429999.573Aotus_nancymaae
ENSNLEG00000004248DDX429978.174ENSACLG00000025113ddx429973.241Astatotilapia_calliptera
ENSNLEG00000004248DDX428983.917ENSAMXG00000011435ddx4210069.413Astyanax_mexicanus
ENSNLEG00000004248DDX429996.839ENSBTAG00000021058DDX4210094.765Bos_taurus
ENSNLEG00000004248DDX428452.623WBGene00008119C46F11.47852.895Caenorhabditis_elegans
ENSNLEG00000004248DDX4210099.572ENSCJAG00000019649DDX429999.739Callithrix_jacchus
ENSNLEG00000004248DDX429997.701ENSCAFG00000012818DDX4210096.146Canis_familiaris
ENSNLEG00000004248DDX429997.845ENSCAFG00020026631DDX4210096.253Canis_lupus_dingo
ENSNLEG00000004248DDX429997.704ENSCHIG00000014431DDX4210095.208Capra_hircus
ENSNLEG00000004248DDX429997.126ENSTSYG00000001380DDX4210094.973Carlito_syrichta
ENSNLEG00000004248DDX429675.704ENSCAPG00000013621DDX429475.704Cavia_aperea
ENSNLEG00000004248DDX429996.983ENSCPOG00000005633DDX4210095.259Cavia_porcellus
ENSNLEG00000004248DDX429999.281ENSCCAG00000020612DDX4210098.034Cebus_capucinus
ENSNLEG00000004248DDX4210099.147ENSCATG00000030490DDX4210099.147Cercocebus_atys
ENSNLEG00000004248DDX429997.270ENSCLAG00000003497DDX4210095.914Chinchilla_lanigera
ENSNLEG00000004248DDX4210095.440ENSCSAG00000003914DDX4210095.440Chlorocebus_sabaeus
ENSNLEG00000004248DDX427995.495ENSCHOG00000006241DDX427995.495Choloepus_hoffmanni
ENSNLEG00000004248DDX429989.250ENSCPBG00000026682DDX4210084.575Chrysemys_picta_bellii
ENSNLEG00000004248DDX426466.368ENSCING00000001837-9467.991Ciona_intestinalis
ENSNLEG00000004248DDX425571.802ENSCSAVG00000002180-9972.178Ciona_savignyi
ENSNLEG00000004248DDX4210099.254ENSCANG00000034663DDX4210099.254Colobus_angolensis_palliatus
ENSNLEG00000004248DDX429996.552ENSCGRG00001009775Ddx4210095.054Cricetulus_griseus_chok1gshd
ENSNLEG00000004248DDX429996.552ENSCGRG00000011718Ddx4210095.054Cricetulus_griseus_crigri
ENSNLEG00000004248DDX429975.926ENSCSEG00000021574ddx429970.426Cynoglossus_semilaevis
ENSNLEG00000004248DDX429977.044ENSCVAG00000011404ddx429972.193Cyprinodon_variegatus
ENSNLEG00000004248DDX429082.992ENSDARG00000037928ddx429971.795Danio_rerio
ENSNLEG00000004248DDX4210089.339ENSDNOG00000007961DDX4210089.339Dasypus_novemcinctus
ENSNLEG00000004248DDX429993.266ENSDORG00000004199Ddx4210087.970Dipodomys_ordii
ENSNLEG00000004248DDX427962.324FBgn0036104CG64188756.133Drosophila_melanogaster
ENSNLEG00000004248DDX428876.480ENSEBUG00000001155ddx429173.342Eptatretus_burgeri
ENSNLEG00000004248DDX429997.989ENSEASG00005013089DDX4210096.592Equus_asinus_asinus
ENSNLEG00000004248DDX429998.132ENSECAG00000022684DDX4210096.592Equus_caballus
ENSNLEG00000004248DDX4267100.000ENSEEUG00000009144DDX4285100.000Erinaceus_europaeus
ENSNLEG00000004248DDX429776.812ENSELUG00000020593ddx4210071.097Esox_lucius
ENSNLEG00000004248DDX429998.563ENSFCAG00000003499DDX4210097.002Felis_catus
ENSNLEG00000004248DDX429990.086ENSFALG00000004675DDX427488.480Ficedula_albicollis
ENSNLEG00000004248DDX429997.270ENSFDAG00000020516DDX4210095.815Fukomys_damarensis
ENSNLEG00000004248DDX429976.614ENSFHEG00000023290ddx429971.125Fundulus_heteroclitus
ENSNLEG00000004248DDX428379.417ENSGMOG00000004595ddx428878.279Gadus_morhua
ENSNLEG00000004248DDX429988.531ENSGALG00000000581DDX4210083.299Gallus_gallus
ENSNLEG00000004248DDX429380.030ENSGAFG00000011846ddx429673.661Gambusia_affinis
ENSNLEG00000004248DDX429475.455ENSGACG00000009782ddx429968.280Gasterosteus_aculeatus
ENSNLEG00000004248DDX429989.078ENSGAGG00000024411DDX429984.122Gopherus_agassizii
ENSNLEG00000004248DDX4210099.857ENSGGOG00000006779DDX4210099.467Gorilla_gorilla
ENSNLEG00000004248DDX429978.174ENSHBUG00000008705ddx429973.454Haplochromis_burtoni
ENSNLEG00000004248DDX4210091.281ENSHGLG00000010024DDX4210091.281Heterocephalus_glaber_female
ENSNLEG00000004248DDX429973.994ENSHGLG00100007138-9572.989Heterocephalus_glaber_male
ENSNLEG00000004248DDX429997.126ENSHGLG00100004479-10095.824Heterocephalus_glaber_male
ENSNLEG00000004248DDX429082.222ENSHCOG00000003357ddx429774.594Hippocampus_comes
ENSNLEG00000004248DDX428983.628ENSIPUG00000013327ddx4210070.626Ictalurus_punctatus
ENSNLEG00000004248DDX429997.991ENSSTOG00000008922DDX4210096.674Ictidomys_tridecemlineatus
ENSNLEG00000004248DDX429996.552ENSJJAG00000011727Ddx4210095.156Jaculus_jaculus
ENSNLEG00000004248DDX429379.638ENSKMAG00000009914ddx429972.046Kryptolebias_marmoratus
ENSNLEG00000004248DDX429077.414ENSLBEG00000004687ddx429967.766Labrus_bergylta
ENSNLEG00000004248DDX428987.621ENSLACG00000013476DDX429778.964Latimeria_chalumnae
ENSNLEG00000004248DDX429980.897ENSLOCG00000011764ddx4210075.188Lepisosteus_oculatus
ENSNLEG00000004248DDX429997.557ENSLAFG00000003249DDX4210096.150Loxodonta_africana
ENSNLEG00000004248DDX4210099.147ENSMFAG00000031356DDX4210099.147Macaca_fascicularis
ENSNLEG00000004248DDX4210098.919ENSMMUG00000016762DDX4210099.023Macaca_mulatta
ENSNLEG00000004248DDX4210099.147ENSMNEG00000038250DDX4210099.147Macaca_nemestrina
ENSNLEG00000004248DDX4210099.254ENSMLEG00000043080DDX4210099.254Mandrillus_leucophaeus
ENSNLEG00000004248DDX429978.255ENSMAMG00000021888ddx429872.622Mastacembelus_armatus
ENSNLEG00000004248DDX429978.174ENSMZEG00005023103ddx429973.241Maylandia_zebra
ENSNLEG00000004248DDX429989.231ENSMGAG00000001822DDX4210083.979Meleagris_gallopavo
ENSNLEG00000004248DDX429997.126ENSMAUG00000020774-9496.875Mesocricetus_auratus
ENSNLEG00000004248DDX429997.986ENSMICG00000009952DDX4210096.771Microcebus_murinus
ENSNLEG00000004248DDX429996.695ENSMOCG00000015504Ddx4210094.409Microtus_ochrogaster
ENSNLEG00000004248DDX429772.780ENSMMOG00000016963ddx428771.346Mola_mola
ENSNLEG00000004248DDX425097.645ENSMODG00000009917-9897.645Monodelphis_domestica
ENSNLEG00000004248DDX429480.909ENSMALG00000007800ddx429973.106Monopterus_albus
ENSNLEG00000004248DDX429997.557MGP_CAROLIEiJ_G0017314Ddx4210095.806Mus_caroli
ENSNLEG00000004248DDX429997.557ENSMUSG00000020705Ddx4210095.806Mus_musculus
ENSNLEG00000004248DDX428299.403MGP_PahariEiJ_G0018444-10099.403Mus_pahari
ENSNLEG00000004248DDX429997.701MGP_SPRETEiJ_G0018158Ddx4210095.914Mus_spretus
ENSNLEG00000004248DDX429998.276ENSMPUG00000014921DDX4210096.383Mustela_putorius_furo
ENSNLEG00000004248DDX429997.845ENSMLUG00000011645DDX4210095.173Myotis_lucifugus
ENSNLEG00000004248DDX429998.276ENSNGAG00000021897Ddx4210096.332Nannospalax_galili
ENSNLEG00000004248DDX429478.261ENSNBRG00000004466ddx429971.962Neolamprologus_brichardi
ENSNLEG00000004248DDX428382.444ENSMEUG00000013227-8582.444Notamacropus_eugenii
ENSNLEG00000004248DDX429996.983ENSOPRG00000014960DDX4210094.692Ochotona_princeps
ENSNLEG00000004248DDX4210092.366ENSODEG00000007810DDX4210092.366Octodon_degus
ENSNLEG00000004248DDX429481.203ENSONIG00000000734ddx429973.348Oreochromis_niloticus
ENSNLEG00000004248DDX427692.135ENSOANG00000000265DDX4210092.208Ornithorhynchus_anatinus
ENSNLEG00000004248DDX429996.983ENSOCUG00000004304DDX428896.409Oryctolagus_cuniculus
ENSNLEG00000004248DDX429976.420ENSORLG00000002395ddx4210070.351Oryzias_latipes
ENSNLEG00000004248DDX429976.705ENSORLG00020011621ddx4210071.958Oryzias_latipes_hni
ENSNLEG00000004248DDX429976.562ENSORLG00015004487ddx4210071.746Oryzias_latipes_hsok
ENSNLEG00000004248DDX429281.164ENSOMEG00000020093ddx4210072.081Oryzias_melastigma
ENSNLEG00000004248DDX429998.129ENSOGAG00000006872DDX4210096.166Otolemur_garnettii
ENSNLEG00000004248DDX429997.561ENSOARG00000013540DDX4210094.515Ovis_aries
ENSNLEG00000004248DDX4210099.680ENSPPAG00000007496DDX4210099.680Pan_paniscus
ENSNLEG00000004248DDX429998.276ENSPPRG00000002740DDX4210096.788Panthera_pardus
ENSNLEG00000004248DDX429998.276ENSPTIG00000009932DDX4210096.895Panthera_tigris_altaica
ENSNLEG00000004248DDX4210099.680ENSPTRG00000009523DDX4210099.680Pan_troglodytes
ENSNLEG00000004248DDX4210099.147ENSPANG00000020990DDX4210099.147Papio_anubis
ENSNLEG00000004248DDX428983.573ENSPKIG00000002901ddx4210070.288Paramormyrops_kingsleyae
ENSNLEG00000004248DDX429691.777ENSPSIG00000010289DDX429891.626Pelodiscus_sinensis
ENSNLEG00000004248DDX429576.992ENSPMGG00000009323ddx4210068.650Periophthalmus_magnuspinnatus
ENSNLEG00000004248DDX429997.126ENSPEMG00000006755Ddx4210095.274Peromyscus_maniculatus_bairdii
ENSNLEG00000004248DDX428875.079ENSPMAG00000005580ddx4210073.097Petromyzon_marinus
ENSNLEG00000004248DDX429993.553ENSPCIG00000009093DDX4210091.217Phascolarctos_cinereus
ENSNLEG00000004248DDX429380.974ENSPFOG00000014104ddx429971.458Poecilia_formosa
ENSNLEG00000004248DDX429380.822ENSPLAG00000010522ddx429971.458Poecilia_latipinna
ENSNLEG00000004248DDX429380.822ENSPMEG00000010744ddx429971.264Poecilia_mexicana
ENSNLEG00000004248DDX429977.233ENSPREG00000009926ddx429970.851Poecilia_reticulata
ENSNLEG00000004248DDX4210097.134ENSPPYG00000008531DDX4210097.134Pongo_abelii
ENSNLEG00000004248DDX429989.943ENSPCAG00000002474DDX4210089.547Procavia_capensis
ENSNLEG00000004248DDX4210087.152ENSPCOG00000001559DDX429988.663Propithecus_coquereli
ENSNLEG00000004248DDX429995.402ENSPVAG00000000160DDX4210091.915Pteropus_vampyrus
ENSNLEG00000004248DDX429775.695ENSPNYG00000013954ddx429770.529Pundamilia_nyererei
ENSNLEG00000004248DDX428983.923ENSPNAG00000017352ddx429970.355Pygocentrus_nattereri
ENSNLEG00000004248DDX429997.270ENSRNOG00000009474Ddx4210095.484Rattus_norvegicus
ENSNLEG00000004248DDX4210099.041ENSRBIG00000004781DDX4210099.041Rhinopithecus_bieti
ENSNLEG00000004248DDX4210099.147ENSRROG00000029794DDX4210099.147Rhinopithecus_roxellana
ENSNLEG00000004248DDX4210099.429ENSSBOG00000029624DDX4210098.507Saimiri_boliviensis_boliviensis
ENSNLEG00000004248DDX427864.247ENSSHAG00000007919-9961.276Sarcophilus_harrisii
ENSNLEG00000004248DDX429993.983ENSSHAG00000012896-10091.534Sarcophilus_harrisii
ENSNLEG00000004248DDX429381.707ENSSFOG00015014064ddx428380.128Scleropages_formosus
ENSNLEG00000004248DDX429380.577ENSSMAG00000009077ddx429972.266Scophthalmus_maximus
ENSNLEG00000004248DDX429480.120ENSSDUG00000022221ddx429973.016Seriola_dumerili
ENSNLEG00000004248DDX429480.152ENSSLDG00000018483ddx429972.543Seriola_lalandi_dorsalis
ENSNLEG00000004248DDX429997.126ENSSARG00000009847DDX4210094.995Sorex_araneus
ENSNLEG00000004248DDX429990.818ENSSPUG00000018806DDX4210084.139Sphenodon_punctatus
ENSNLEG00000004248DDX429480.873ENSSPAG00000013055ddx429972.669Stegastes_partitus
ENSNLEG00000004248DDX429897.826ENSSSCG00000017289DDX429794.665Sus_scrofa
ENSNLEG00000004248DDX429891.594ENSTGUG00000001931DDX4210083.682Taeniopygia_guttata
ENSNLEG00000004248DDX429379.726ENSTRUG00000010711ddx429981.556Takifugu_rubripes
ENSNLEG00000004248DDX429193.396ENSTBEG00000010159DDX429993.684Tupaia_belangeri
ENSNLEG00000004248DDX429997.848ENSTTRG00000006962DDX4210096.154Tursiops_truncatus
ENSNLEG00000004248DDX429997.989ENSUAMG00000007321DDX4210096.150Ursus_americanus
ENSNLEG00000004248DDX429997.989ENSUMAG00000017438DDX4210095.508Ursus_maritimus
ENSNLEG00000004248DDX4292100.000ENSVPAG00000009633DDX4291100.000Vicugna_pacos
ENSNLEG00000004248DDX429997.989ENSVVUG00000006095DDX4210096.467Vulpes_vulpes
ENSNLEG00000004248DDX429981.418ENSXETG00000003245ddx4210076.255Xenopus_tropicalis
ENSNLEG00000004248DDX429081.260ENSXCOG00000017560ddx429772.222Xiphophorus_couchianus
ENSNLEG00000004248DDX429380.793ENSXMAG00000008138ddx429972.892Xiphophorus_maculatus