EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000004454 (Gene tree)
Gene ID: 100585728
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 26157 bases
Position: chr18:81420450-81446606
Accession: 100585728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000041398	SMN	PF06003.12	7.8e-104	1	1
ENSNLEP00000027981	SMN	PF06003.12	7.4e-100	1	1
ENSNLEP00000029216	SMN	PF06003.12	7.8e-100	1	1
ENSNLEP00000005396	SMN	PF06003.12	1.2e-99	1	1
ENSNLEP00000025664	SMN	PF06003.12	7.1e-91	1	2
ENSNLEP00000025664	SMN	PF06003.12	7.1e-91	2	2
ENSNLEP00000045045	SMN	PF06003.12	4.5e-56	1	2
ENSNLEP00000045045	SMN	PF06003.12	4.5e-56	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000048298	-	966	XM_003266041	ENSNLEP00000025664	262 (aa)	XP_003266089	A0A2I3FYS9
ENSNLET00000005678	-	846	-	ENSNLEP00000005396	282 (aa)	-	G1QWS5
ENSNLET00000055747	-	849	XM_003266039	ENSNLEP00000029216	282 (aa)	XP_003266087	A0A2I3GD31
ENSNLET00000035847	-	684	-	ENSNLEP00000045045	227 (aa)	-	A0A2I3HNG7
ENSNLET00000035542	-	1062	XM_003266038	ENSNLEP00000041398	294 (aa)	XP_003266086	A0A2I3HCL7
ENSNLET00000059840	-	885	-	ENSNLEP00000027981	294 (aa)	-	A0A2I3G9J7

Gene Model

Click here to download ENSNLEG00000004454's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000004454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000004454	-	100	99.559	ENSG00000172062	SMN1	100	99.559	Homo_sapiens
ENSNLEG00000004454	-	100	99.559	ENSG00000205571	SMN2	100	99.559	Homo_sapiens
ENSNLEG00000004454	-	92	52.060	ENSAPOG00000011324	smn1	94	52.878	Acanthochromis_polyacanthus
ENSNLEG00000004454	-	95	88.612	ENSAMEG00000003316	-	96	87.671	Ailuropoda_melanoleuca
ENSNLEG00000004454	-	91	52.060	ENSACIG00000019772	-	97	50.385	Amphilophus_citrinellus
ENSNLEG00000004454	-	92	52.060	ENSAOCG00000024444	smn1	94	52.878	Amphiprion_ocellaris
ENSNLEG00000004454	-	92	52.434	ENSAPEG00000016504	smn1	94	53.237	Amphiprion_percula
ENSNLEG00000004454	-	92	53.875	ENSATEG00000002182	smn1	81	53.957	Anabas_testudineus
ENSNLEG00000004454	-	68	57.513	ENSAPLG00000010912	-	97	55.500	Anas_platyrhynchos
ENSNLEG00000004454	-	84	81.633	ENSACAG00000010017	-	95	57.651	Anolis_carolinensis
ENSNLEG00000004454	-	100	90.878	ENSANAG00000032133	-	100	90.878	Aotus_nancymaae
ENSNLEG00000004454	-	92	54.074	ENSACLG00000007308	smn1	88	52.788	Astatotilapia_calliptera
ENSNLEG00000004454	-	54	57.746	ENSAMXG00000013884	smn1	97	49.265	Astyanax_mexicanus
ENSNLEG00000004454	-	95	84.328	ENSBTAG00000005743	SMN2	99	83.972	Bos_taurus
ENSNLEG00000004454	-	85	33.188	WBGene00004887	smn-1	94	32.432	Caenorhabditis_elegans
ENSNLEG00000004454	-	100	94.656	ENSCJAG00000016290	-	100	94.656	Callithrix_jacchus
ENSNLEG00000004454	-	95	87.900	ENSCAFG00000007812	SMN	99	86.986	Canis_familiaris
ENSNLEG00000004454	-	95	87.900	ENSCAFG00020019229	-	93	86.986	Canis_lupus_dingo
ENSNLEG00000004454	-	95	85.130	ENSCHIG00000015559	-	99	83.618	Capra_hircus
ENSNLEG00000004454	-	99	89.615	ENSTSYG00000012058	-	99	89.615	Carlito_syrichta
ENSNLEG00000004454	-	77	68.037	ENSCAPG00000011021	-	96	68.493	Cavia_aperea
ENSNLEG00000004454	-	100	81.522	ENSCPOG00000012328	-	99	80.068	Cavia_porcellus
ENSNLEG00000004454	-	99	83.908	ENSCPOG00000036973	-	99	80.887	Cavia_porcellus
ENSNLEG00000004454	-	100	94.656	ENSCCAG00000018127	-	100	94.656	Cebus_capucinus
ENSNLEG00000004454	-	100	96.565	ENSCATG00000037002	-	100	96.565	Cercocebus_atys
ENSNLEG00000004454	-	99	80.000	ENSCLAG00000000284	-	99	80.000	Chinchilla_lanigera
ENSNLEG00000004454	-	100	96.599	ENSCSAG00000015688	-	100	96.599	Chlorocebus_sabaeus
ENSNLEG00000004454	-	81	82.812	ENSCHOG00000007346	-	100	73.810	Choloepus_hoffmanni
ENSNLEG00000004454	-	99	61.566	ENSCPBG00000010968	-	99	61.852	Chrysemys_picta_bellii
ENSNLEG00000004454	-	99	91.039	ENSCANG00000033324	-	99	86.441	Colobus_angolensis_palliatus
ENSNLEG00000004454	-	100	96.565	ENSCANG00000038242	-	100	96.565	Colobus_angolensis_palliatus
ENSNLEG00000004454	-	99	82.734	ENSCGRG00001017959	-	99	82.534	Cricetulus_griseus_chok1gshd
ENSNLEG00000004454	-	99	63.699	ENSCGRG00001016998	-	99	63.699	Cricetulus_griseus_chok1gshd
ENSNLEG00000004454	-	99	82.734	ENSCGRG00000007698	Smn1	99	82.534	Cricetulus_griseus_crigri
ENSNLEG00000004454	-	94	48.754	ENSCSEG00000015227	smn1	98	48.464	Cynoglossus_semilaevis
ENSNLEG00000004454	-	94	52.416	ENSCVAG00000007498	smn1	94	52.381	Cyprinodon_variegatus
ENSNLEG00000004454	-	93	52.788	ENSDARG00000018494	smn1	96	53.285	Danio_rerio
ENSNLEG00000004454	-	77	72.277	ENSDNOG00000045949	-	89	71.770	Dasypus_novemcinctus
ENSNLEG00000004454	-	82	83.817	ENSDNOG00000007283	-	99	83.817	Dasypus_novemcinctus
ENSNLEG00000004454	-	99	83.688	ENSDORG00000007082	Smn1	99	78.351	Dipodomys_ordii
ENSNLEG00000004454	-	80	70.000	ENSETEG00000001406	-	93	69.744	Echinops_telfairi
ENSNLEG00000004454	-	94	41.429	ENSEBUG00000011902	smn1	93	39.146	Eptatretus_burgeri
ENSNLEG00000004454	-	99	76.868	ENSEASG00005018000	-	98	76.325	Equus_asinus_asinus
ENSNLEG00000004454	-	90	93.651	ENSECAG00000015215	-	99	86.301	Equus_caballus
ENSNLEG00000004454	-	89	81.349	ENSEEUG00000015777	-	100	81.349	Erinaceus_europaeus
ENSNLEG00000004454	-	78	73.077	ENSELUG00000018067	smn1	94	53.237	Esox_lucius
ENSNLEG00000004454	-	99	88.699	ENSFCAG00000028292	SMN	99	88.699	Felis_catus
ENSNLEG00000004454	-	89	60.784	ENSFALG00000012320	-	94	58.088	Ficedula_albicollis
ENSNLEG00000004454	-	95	82.278	ENSFDAG00000017683	-	99	79.125	Fukomys_damarensis
ENSNLEG00000004454	-	68	56.742	ENSFHEG00000018508	smn1	96	50.370	Fundulus_heteroclitus
ENSNLEG00000004454	-	96	49.259	ENSGMOG00000017279	smn1	95	48.921	Gadus_morhua
ENSNLEG00000004454	-	93	59.245	ENSGALG00000002430	SMN	95	56.985	Gallus_gallus
ENSNLEG00000004454	-	90	55.785	ENSGAFG00000009501	smn1	94	55.785	Gambusia_affinis
ENSNLEG00000004454	-	92	54.789	ENSGACG00000010584	smn1	91	51.661	Gasterosteus_aculeatus
ENSNLEG00000004454	-	93	37.209	ENSGAGG00000013639	-	90	38.931	Gopherus_agassizii
ENSNLEG00000004454	-	96	62.545	ENSGAGG00000011374	-	99	59.932	Gopherus_agassizii
ENSNLEG00000004454	-	100	84.733	ENSGGOG00000026704	-	99	98.095	Gorilla_gorilla
ENSNLEG00000004454	-	97	96.094	ENSGGOG00000003872	-	100	98.780	Gorilla_gorilla
ENSNLEG00000004454	-	92	54.615	ENSHBUG00000013987	smn1	94	52.612	Haplochromis_burtoni
ENSNLEG00000004454	-	99	79.125	ENSHGLG00000001018	-	99	79.125	Heterocephalus_glaber_female
ENSNLEG00000004454	-	99	78.082	ENSHGLG00000001905	-	99	78.873	Heterocephalus_glaber_female
ENSNLEG00000004454	-	99	79.125	ENSHGLG00100011252	-	99	79.125	Heterocephalus_glaber_male
ENSNLEG00000004454	-	99	77.419	ENSHGLG00100018676	-	100	77.660	Heterocephalus_glaber_male
ENSNLEG00000004454	-	86	80.851	ENSHCOG00000017136	smn1	87	50.379	Hippocampus_comes
ENSNLEG00000004454	-	91	51.119	ENSIPUG00000012580	smn1	85	48.754	Ictalurus_punctatus
ENSNLEG00000004454	-	99	86.738	ENSSTOG00000012288	-	100	86.738	Ictidomys_tridecemlineatus
ENSNLEG00000004454	-	66	60.345	ENSJJAG00000014853	-	89	64.000	Jaculus_jaculus
ENSNLEG00000004454	-	92	54.745	ENSKMAG00000007239	smn1	96	53.992	Kryptolebias_marmoratus
ENSNLEG00000004454	-	92	51.812	ENSLBEG00000022550	smn1	94	53.480	Labrus_bergylta
ENSNLEG00000004454	-	93	37.770	ENSLACG00000009808	-	95	38.926	Latimeria_chalumnae
ENSNLEG00000004454	-	93	50.379	ENSLOCG00000011339	smn1	93	55.738	Lepisosteus_oculatus
ENSNLEG00000004454	-	99	84.615	ENSLAFG00000003425	-	100	80.986	Loxodonta_africana
ENSNLEG00000004454	-	100	97.357	ENSMFAG00000031523	SMN1	100	97.357	Macaca_fascicularis
ENSNLEG00000004454	-	100	92.517	ENSMFAG00000008812	-	100	92.517	Macaca_fascicularis
ENSNLEG00000004454	-	100	91.837	ENSMMUG00000030594	-	100	91.837	Macaca_mulatta
ENSNLEG00000004454	-	100	97.357	ENSMMUG00000020214	SMN1	100	97.357	Macaca_mulatta
ENSNLEG00000004454	-	100	97.163	ENSMNEG00000035094	-	100	97.163	Macaca_nemestrina
ENSNLEG00000004454	-	76	83.857	ENSMNEG00000036423	-	87	83.857	Macaca_nemestrina
ENSNLEG00000004454	-	100	96.947	ENSMLEG00000041902	-	100	96.947	Mandrillus_leucophaeus
ENSNLEG00000004454	-	92	51.880	ENSMAMG00000011034	smn1	94	51.087	Mastacembelus_armatus
ENSNLEG00000004454	-	92	51.923	ENSMZEG00005013634	smn1	94	52.612	Maylandia_zebra
ENSNLEG00000004454	-	68	55.440	ENSMGAG00000008889	-	95	53.266	Meleagris_gallopavo
ENSNLEG00000004454	-	99	80.645	ENSMAUG00000010262	Smn1	99	81.164	Mesocricetus_auratus
ENSNLEG00000004454	-	99	89.011	ENSMICG00000034708	-	99	89.011	Microcebus_murinus
ENSNLEG00000004454	-	99	80.576	ENSMOCG00000017833	Smn1	99	80.479	Microtus_ochrogaster
ENSNLEG00000004454	-	93	51.527	ENSMMOG00000005504	smn1	94	53.992	Mola_mola
ENSNLEG00000004454	-	87	83.333	ENSMODG00000001436	-	97	69.338	Monodelphis_domestica
ENSNLEG00000004454	-	93	49.270	ENSMALG00000008025	smn1	94	51.429	Monopterus_albus
ENSNLEG00000004454	-	99	82.418	MGP_CAROLIEiJ_G0018836	Smn1	99	81.507	Mus_caroli
ENSNLEG00000004454	-	99	81.655	ENSMUSG00000021645	Smn1	99	81.507	Mus_musculus
ENSNLEG00000004454	-	99	80.220	MGP_PahariEiJ_G0015911	Smn1	99	78.082	Mus_pahari
ENSNLEG00000004454	-	99	81.319	MGP_SPRETEiJ_G0019718	Smn1	99	80.822	Mus_spretus
ENSNLEG00000004454	-	99	88.571	ENSMPUG00000014470	-	98	88.571	Mustela_putorius_furo
ENSNLEG00000004454	-	95	87.456	ENSMLUG00000010603	-	95	86.913	Myotis_lucifugus
ENSNLEG00000004454	-	99	82.796	ENSNGAG00000019833	Smn1	99	82.534	Nannospalax_galili
ENSNLEG00000004454	-	92	53.846	ENSNBRG00000023000	smn1	94	52.878	Neolamprologus_brichardi
ENSNLEG00000004454	-	80	61.404	ENSMEUG00000011393	-	99	62.882	Notamacropus_eugenii
ENSNLEG00000004454	-	89	81.423	ENSOPRG00000002015	-	100	82.213	Ochotona_princeps
ENSNLEG00000004454	-	99	79.930	ENSODEG00000015976	-	97	80.144	Octodon_degus
ENSNLEG00000004454	-	93	53.091	ENSONIG00000011799	smn1	95	52.143	Oreochromis_niloticus
ENSNLEG00000004454	-	78	90.698	ENSOANG00000001626	-	95	63.370	Ornithorhynchus_anatinus
ENSNLEG00000004454	-	99	78.644	ENSOCUG00000025183	-	99	78.983	Oryctolagus_cuniculus
ENSNLEG00000004454	-	94	88.406	ENSOCUG00000026649	-	100	81.667	Oryctolagus_cuniculus
ENSNLEG00000004454	-	99	82.877	ENSOCUG00000017097	-	99	82.877	Oryctolagus_cuniculus
ENSNLEG00000004454	-	92	52.852	ENSORLG00000010552	smn1	94	52.768	Oryzias_latipes
ENSNLEG00000004454	-	92	52.308	ENSORLG00020007936	smn1	93	55.285	Oryzias_latipes_hni
ENSNLEG00000004454	-	92	50.370	ENSORLG00015022425	smn1	94	52.399	Oryzias_latipes_hsok
ENSNLEG00000004454	-	92	52.768	ENSOMEG00000007824	smn1	94	52.878	Oryzias_melastigma
ENSNLEG00000004454	-	95	80.812	ENSOGAG00000031414	-	100	79.167	Otolemur_garnettii
ENSNLEG00000004454	-	93	82.482	ENSOARG00000005425	-	99	82.482	Ovis_aries
ENSNLEG00000004454	-	100	99.559	ENSPPAG00000036640	-	100	99.559	Pan_paniscus
ENSNLEG00000004454	-	99	89.041	ENSPPRG00000005575	-	99	89.041	Panthera_pardus
ENSNLEG00000004454	-	99	89.384	ENSPTIG00000007745	-	99	89.384	Panthera_tigris_altaica
ENSNLEG00000004454	-	100	98.901	ENSPTRG00000016955	-	100	98.901	Pan_troglodytes
ENSNLEG00000004454	-	100	97.802	ENSPANG00000013601	-	100	97.802	Papio_anubis
ENSNLEG00000004454	-	100	91.209	ENSPANG00000000253	-	98	91.667	Papio_anubis
ENSNLEG00000004454	-	76	91.892	ENSPKIG00000011096	smn1	93	54.357	Paramormyrops_kingsleyae
ENSNLEG00000004454	-	92	59.630	ENSPSIG00000014787	-	90	57.934	Pelodiscus_sinensis
ENSNLEG00000004454	-	93	48.352	ENSPMGG00000012285	smn1	97	49.265	Periophthalmus_magnuspinnatus
ENSNLEG00000004454	-	90	41.045	ENSPMAG00000005004	smn1	96	40.614	Petromyzon_marinus
ENSNLEG00000004454	-	85	84.746	ENSPCIG00000025764	-	98	69.686	Phascolarctos_cinereus
ENSNLEG00000004454	-	92	53.232	ENSPFOG00000007786	smn1	94	51.838	Poecilia_formosa
ENSNLEG00000004454	-	90	56.198	ENSPLAG00000012071	smn1	94	57.438	Poecilia_latipinna
ENSNLEG00000004454	-	90	55.785	ENSPMEG00000017085	smn1	94	57.025	Poecilia_mexicana
ENSNLEG00000004454	-	90	57.438	ENSPREG00000005824	smn1	94	57.438	Poecilia_reticulata
ENSNLEG00000004454	-	83	63.761	ENSPPYG00000019189	-	99	63.303	Pongo_abelii
ENSNLEG00000004454	-	91	98.141	ENSPPYG00000015533	-	97	98.141	Pongo_abelii
ENSNLEG00000004454	-	90	81.111	ENSPCAG00000004187	-	99	80.741	Procavia_capensis
ENSNLEG00000004454	-	85	91.525	ENSPCOG00000022307	-	90	84.804	Propithecus_coquereli
ENSNLEG00000004454	-	99	89.041	ENSPVAG00000005977	-	99	89.041	Pteropus_vampyrus
ENSNLEG00000004454	-	92	53.846	ENSPNYG00000014148	smn1	94	52.878	Pundamilia_nyererei
ENSNLEG00000004454	-	92	51.724	ENSPNAG00000014007	smn1	82	49.643	Pygocentrus_nattereri
ENSNLEG00000004454	-	99	81.319	ENSRNOG00000018067	Smn1	99	79.522	Rattus_norvegicus
ENSNLEG00000004454	-	99	83.154	ENSRBIG00000036775	-	99	78.983	Rhinopithecus_bieti
ENSNLEG00000004454	-	100	96.939	ENSRBIG00000037052	-	100	96.939	Rhinopithecus_bieti
ENSNLEG00000004454	-	100	96.939	ENSRROG00000039399	-	100	96.939	Rhinopithecus_roxellana
ENSNLEG00000004454	-	100	81.752	ENSRROG00000031088	-	100	80.000	Rhinopithecus_roxellana
ENSNLEG00000004454	-	86	86.000	ENSSBOG00000020112	-	87	86.400	Saimiri_boliviensis_boliviensis
ENSNLEG00000004454	-	100	93.893	ENSSBOG00000011665	-	100	93.893	Saimiri_boliviensis_boliviensis
ENSNLEG00000004454	-	99	66.894	ENSSHAG00000001499	-	96	69.145	Sarcophilus_harrisii
ENSNLEG00000004454	-	90	53.226	ENSSFOG00015015507	smn1	94	53.226	Scleropages_formosus
ENSNLEG00000004454	-	93	50.187	ENSSMAG00000007922	smn1	94	49.071	Scophthalmus_maximus
ENSNLEG00000004454	-	92	52.190	ENSSDUG00000018533	smn1	94	52.688	Seriola_dumerili
ENSNLEG00000004454	-	92	52.555	ENSSLDG00000021135	smn1	94	53.047	Seriola_lalandi_dorsalis
ENSNLEG00000004454	-	89	68.919	ENSSPUG00000000373	-	96	62.007	Sphenodon_punctatus
ENSNLEG00000004454	-	92	52.399	ENSSPAG00000004345	smn1	94	53.755	Stegastes_partitus
ENSNLEG00000004454	-	97	66.142	ENSSSCG00000029127	-	99	66.142	Sus_scrofa
ENSNLEG00000004454	-	72	57.277	ENSSSCG00000033865	-	94	60.563	Sus_scrofa
ENSNLEG00000004454	-	99	89.384	ENSSSCG00000016970	-	99	89.384	Sus_scrofa
ENSNLEG00000004454	-	98	58.719	ENSTGUG00000001548	-	100	58.719	Taeniopygia_guttata
ENSNLEG00000004454	-	91	48.507	ENSTRUG00000000736	smn	96	48.921	Takifugu_rubripes
ENSNLEG00000004454	-	93	49.434	ENSTNIG00000009892	smn1	95	48.540	Tetraodon_nigroviridis
ENSNLEG00000004454	-	70	86.957	ENSTBEG00000002399	-	93	85.641	Tupaia_belangeri
ENSNLEG00000004454	-	95	85.448	ENSTTRG00000005080	-	99	83.333	Tursiops_truncatus
ENSNLEG00000004454	-	70	88.043	ENSUAMG00000024947	-	71	86.667	Ursus_americanus
ENSNLEG00000004454	-	95	89.324	ENSUMAG00000007842	-	74	88.356	Ursus_maritimus
ENSNLEG00000004454	-	85	92.188	ENSVPAG00000009887	-	100	75.269	Vicugna_pacos
ENSNLEG00000004454	-	95	87.900	ENSVVUG00000006934	-	99	86.986	Vulpes_vulpes
ENSNLEG00000004454	-	90	36.131	ENSXETG00000004912	-	79	57.143	Xenopus_tropicalis
ENSNLEG00000004454	-	90	65.432	ENSXETG00000018189	smn2	95	53.103	Xenopus_tropicalis
ENSNLEG00000004454	-	91	56.148	ENSXMAG00000001521	smn1	95	56.148	Xiphophorus_maculatus