EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000004516 (Gene tree)
Gene ID: 100587511
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 39275 bases
Position: chr18:82353860-82393134
Accession: 100587511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000005516	MRP-S27	PF10037.9	3.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000054224	PTCD2-203	1776	XM_012497336	ENSNLEP00000031463	279 (aa)	XP_012352790	A0A2I3GJH5
ENSNLET00000048088	PTCD2-204	282	-	ENSNLEP00000047199	93 (aa)	-	A0A2I3HUB0
ENSNLET00000005800	PTCD2-202	2103	XM_003266045	ENSNLEP00000005516	388 (aa)	XP_003266093	G1QX45
ENSNLET00000042404	PTCD2-201	1912	XM_012497338	ENSNLEP00000045083	216 (aa)	XP_012352792	A0A2I3HN63

Gene Model

Click here to download ENSNLEG00000004516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000004516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000004516	PTCD2	100	96.134	ENSG00000049883	PTCD2	100	97.260	Homo_sapiens
ENSNLEG00000004516	PTCD2	96	45.867	ENSAPOG00000020682	ptcd2	97	45.867	Acanthochromis_polyacanthus
ENSNLEG00000004516	PTCD2	99	77.403	ENSAMEG00000007194	PTCD2	99	77.403	Ailuropoda_melanoleuca
ENSNLEG00000004516	PTCD2	89	40.401	ENSACIG00000002053	ptcd2	100	40.401	Amphilophus_citrinellus
ENSNLEG00000004516	PTCD2	94	45.479	ENSAOCG00000006616	ptcd2	93	45.479	Amphiprion_ocellaris
ENSNLEG00000004516	PTCD2	94	45.479	ENSAPEG00000022926	ptcd2	93	45.479	Amphiprion_percula
ENSNLEG00000004516	PTCD2	98	56.693	ENSACAG00000009747	PTCD2	97	56.693	Anolis_carolinensis
ENSNLEG00000004516	PTCD2	100	87.371	ENSANAG00000029353	PTCD2	100	87.371	Aotus_nancymaae
ENSNLEG00000004516	PTCD2	89	44.092	ENSACLG00000027742	ptcd2	89	44.092	Astatotilapia_calliptera
ENSNLEG00000004516	PTCD2	85	43.636	ENSAMXG00000029404	ptcd2	88	43.636	Astyanax_mexicanus
ENSNLEG00000004516	PTCD2	99	80.729	ENSBTAG00000014675	PTCD2	100	80.729	Bos_taurus
ENSNLEG00000004516	PTCD2	100	87.629	ENSCJAG00000016364	PTCD2	100	87.629	Callithrix_jacchus
ENSNLEG00000004516	PTCD2	99	76.623	ENSCAFG00000007982	PTCD2	90	76.623	Canis_familiaris
ENSNLEG00000004516	PTCD2	90	78.448	ENSCAFG00020019147	PTCD2	98	78.448	Canis_lupus_dingo
ENSNLEG00000004516	PTCD2	99	81.771	ENSCHIG00000017118	PTCD2	100	81.771	Capra_hircus
ENSNLEG00000004516	PTCD2	99	75.196	ENSCPOG00000040168	PTCD2	100	75.196	Cavia_porcellus
ENSNLEG00000004516	PTCD2	100	87.113	ENSCCAG00000029389	-	100	87.113	Cebus_capucinus
ENSNLEG00000004516	PTCD2	81	84.345	ENSCCAG00000021996	-	98	82.132	Cebus_capucinus
ENSNLEG00000004516	PTCD2	99	90.601	ENSCATG00000019069	PTCD2	100	90.601	Cercocebus_atys
ENSNLEG00000004516	PTCD2	99	75.196	ENSCLAG00000000072	PTCD2	100	75.196	Chinchilla_lanigera
ENSNLEG00000004516	PTCD2	99	91.645	ENSCSAG00000015623	PTCD2	100	91.645	Chlorocebus_sabaeus
ENSNLEG00000004516	PTCD2	89	58.908	ENSCHOG00000010634	PTCD2	100	58.908	Choloepus_hoffmanni
ENSNLEG00000004516	PTCD2	100	54.337	ENSCPBG00000000216	PTCD2	100	54.337	Chrysemys_picta_bellii
ENSNLEG00000004516	PTCD2	100	90.464	ENSCANG00000035636	PTCD2	100	90.464	Colobus_angolensis_palliatus
ENSNLEG00000004516	PTCD2	99	73.316	ENSCGRG00001015289	Ptcd2	84	73.316	Cricetulus_griseus_chok1gshd
ENSNLEG00000004516	PTCD2	99	73.316	ENSCGRG00000006193	Ptcd2	84	73.316	Cricetulus_griseus_crigri
ENSNLEG00000004516	PTCD2	90	45.115	ENSCVAG00000001285	ptcd2	89	45.115	Cyprinodon_variegatus
ENSNLEG00000004516	PTCD2	98	44.764	ENSDARG00000035391	ptcd2	99	44.764	Danio_rerio
ENSNLEG00000004516	PTCD2	99	77.546	ENSDNOG00000008719	PTCD2	100	77.546	Dasypus_novemcinctus
ENSNLEG00000004516	PTCD2	99	76.744	ENSDORG00000004921	Ptcd2	100	76.744	Dipodomys_ordii
ENSNLEG00000004516	PTCD2	99	68.814	ENSETEG00000016542	PTCD2	99	68.814	Echinops_telfairi
ENSNLEG00000004516	PTCD2	99	78.851	ENSEASG00005018038	PTCD2	100	78.851	Equus_asinus_asinus
ENSNLEG00000004516	PTCD2	99	78.906	ENSECAG00000007022	PTCD2	99	78.906	Equus_caballus
ENSNLEG00000004516	PTCD2	99	74.219	ENSEEUG00000014031	PTCD2	99	74.219	Erinaceus_europaeus
ENSNLEG00000004516	PTCD2	90	50.427	ENSELUG00000003584	ptcd2	91	50.427	Esox_lucius
ENSNLEG00000004516	PTCD2	99	73.127	ENSFCAG00000045432	PTCD2	83	73.127	Felis_catus
ENSNLEG00000004516	PTCD2	84	52.905	ENSFALG00000010299	PTCD2	99	52.905	Ficedula_albicollis
ENSNLEG00000004516	PTCD2	99	77.285	ENSFDAG00000018461	PTCD2	100	77.285	Fukomys_damarensis
ENSNLEG00000004516	PTCD2	89	50.571	ENSGMOG00000003637	ptcd2	91	50.571	Gadus_morhua
ENSNLEG00000004516	PTCD2	90	52.000	ENSGALG00000038260	PTCD2	100	49.741	Gallus_gallus
ENSNLEG00000004516	PTCD2	100	57.908	ENSGAGG00000021952	PTCD2	100	57.908	Gopherus_agassizii
ENSNLEG00000004516	PTCD2	100	96.392	ENSGGOG00000010695	PTCD2	100	96.392	Gorilla_gorilla
ENSNLEG00000004516	PTCD2	89	44.092	ENSHBUG00000009191	ptcd2	89	44.092	Haplochromis_burtoni
ENSNLEG00000004516	PTCD2	99	75.718	ENSHGLG00000001234	PTCD2	100	75.718	Heterocephalus_glaber_female
ENSNLEG00000004516	PTCD2	99	75.718	ENSHGLG00100015419	PTCD2	100	75.718	Heterocephalus_glaber_male
ENSNLEG00000004516	PTCD2	97	45.093	ENSHCOG00000001703	ptcd2	95	45.093	Hippocampus_comes
ENSNLEG00000004516	PTCD2	84	44.444	ENSIPUG00000006080	ptcd2	90	43.931	Ictalurus_punctatus
ENSNLEG00000004516	PTCD2	98	80.628	ENSSTOG00000006596	PTCD2	99	80.628	Ictidomys_tridecemlineatus
ENSNLEG00000004516	PTCD2	99	77.807	ENSJJAG00000024388	Ptcd2	100	77.807	Jaculus_jaculus
ENSNLEG00000004516	PTCD2	96	42.246	ENSKMAG00000009329	ptcd2	97	42.246	Kryptolebias_marmoratus
ENSNLEG00000004516	PTCD2	89	45.376	ENSLBEG00000024871	ptcd2	88	45.376	Labrus_bergylta
ENSNLEG00000004516	PTCD2	94	54.121	ENSLOCG00000011122	ptcd2	94	54.121	Lepisosteus_oculatus
ENSNLEG00000004516	PTCD2	80	78.457	ENSLAFG00000004115	PTCD2	100	78.457	Loxodonta_africana
ENSNLEG00000004516	PTCD2	100	90.722	ENSMFAG00000031516	PTCD2	100	90.722	Macaca_fascicularis
ENSNLEG00000004516	PTCD2	99	90.862	ENSMNEG00000007537	PTCD2	100	90.862	Macaca_nemestrina
ENSNLEG00000004516	PTCD2	100	90.464	ENSMLEG00000031093	PTCD2	100	90.464	Mandrillus_leucophaeus
ENSNLEG00000004516	PTCD2	90	47.414	ENSMAMG00000018529	ptcd2	91	47.414	Mastacembelus_armatus
ENSNLEG00000004516	PTCD2	89	44.092	ENSMZEG00005003625	ptcd2	89	44.092	Maylandia_zebra
ENSNLEG00000004516	PTCD2	89	52.738	ENSMGAG00000005033	PTCD2	99	52.738	Meleagris_gallopavo
ENSNLEG00000004516	PTCD2	99	56.397	ENSMAUG00000020253	Ptcd2	100	56.397	Mesocricetus_auratus
ENSNLEG00000004516	PTCD2	99	80.362	ENSMICG00000004535	PTCD2	99	80.362	Microcebus_murinus
ENSNLEG00000004516	PTCD2	99	72.585	ENSMOCG00000019985	Ptcd2	100	72.585	Microtus_ochrogaster
ENSNLEG00000004516	PTCD2	99	57.552	ENSMODG00000001695	PTCD2	100	57.552	Monodelphis_domestica
ENSNLEG00000004516	PTCD2	89	48.991	ENSMALG00000022372	ptcd2	91	48.991	Monopterus_albus
ENSNLEG00000004516	PTCD2	99	72.585	MGP_CAROLIEiJ_G0018829	Ptcd2	100	72.585	Mus_caroli
ENSNLEG00000004516	PTCD2	99	71.802	ENSMUSG00000021650	Ptcd2	100	71.802	Mus_musculus
ENSNLEG00000004516	PTCD2	99	74.674	MGP_PahariEiJ_G0015904	Ptcd2	100	74.674	Mus_pahari
ENSNLEG00000004516	PTCD2	99	72.324	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.324	Mus_spretus
ENSNLEG00000004516	PTCD2	99	78.851	ENSMPUG00000014401	PTCD2	100	78.851	Mustela_putorius_furo
ENSNLEG00000004516	PTCD2	99	79.016	ENSMLUG00000007374	PTCD2	99	79.016	Myotis_lucifugus
ENSNLEG00000004516	PTCD2	99	75.196	ENSNGAG00000005027	Ptcd2	100	75.196	Nannospalax_galili
ENSNLEG00000004516	PTCD2	89	44.380	ENSNBRG00000008174	ptcd2	91	44.380	Neolamprologus_brichardi
ENSNLEG00000004516	PTCD2	85	43.030	ENSNBRG00000000092	-	100	43.030	Neolamprologus_brichardi
ENSNLEG00000004516	PTCD2	99	45.478	ENSMEUG00000014012	-	99	45.478	Notamacropus_eugenii
ENSNLEG00000004516	PTCD2	99	73.902	ENSOPRG00000007290	PTCD2	99	73.902	Ochotona_princeps
ENSNLEG00000004516	PTCD2	99	77.285	ENSODEG00000016417	PTCD2	100	77.285	Octodon_degus
ENSNLEG00000004516	PTCD2	82	44.654	ENSONIG00000011269	ptcd2	90	44.654	Oreochromis_niloticus
ENSNLEG00000004516	PTCD2	94	78.571	ENSOCUG00000007970	PTCD2	100	77.285	Oryctolagus_cuniculus
ENSNLEG00000004516	PTCD2	94	45.330	ENSORLG00000003851	ptcd2	92	45.330	Oryzias_latipes
ENSNLEG00000004516	PTCD2	94	44.780	ENSORLG00020009823	ptcd2	94	44.780	Oryzias_latipes_hni
ENSNLEG00000004516	PTCD2	89	46.243	ENSORLG00015016777	ptcd2	99	46.243	Oryzias_latipes_hsok
ENSNLEG00000004516	PTCD2	93	43.646	ENSOMEG00000012396	ptcd2	87	43.646	Oryzias_melastigma
ENSNLEG00000004516	PTCD2	99	74.677	ENSOGAG00000008390	PTCD2	99	74.677	Otolemur_garnettii
ENSNLEG00000004516	PTCD2	99	80.879	ENSOARG00000005087	PTCD2	99	80.879	Ovis_aries
ENSNLEG00000004516	PTCD2	100	96.134	ENSPPAG00000028480	PTCD2	100	96.134	Pan_paniscus
ENSNLEG00000004516	PTCD2	100	95.876	ENSPTRG00000016968	PTCD2	100	95.876	Pan_troglodytes
ENSNLEG00000004516	PTCD2	89	91.594	ENSPANG00000006611	PTCD2	89	91.594	Papio_anubis
ENSNLEG00000004516	PTCD2	90	47.025	ENSPKIG00000019896	ptcd2	92	47.025	Paramormyrops_kingsleyae
ENSNLEG00000004516	PTCD2	79	62.092	ENSPSIG00000014559	PTCD2	95	62.092	Pelodiscus_sinensis
ENSNLEG00000004516	PTCD2	99	72.987	ENSPEMG00000000884	Ptcd2	100	72.987	Peromyscus_maniculatus_bairdii
ENSNLEG00000004516	PTCD2	99	60.677	ENSPCIG00000029047	PTCD2	100	60.677	Phascolarctos_cinereus
ENSNLEG00000004516	PTCD2	89	44.092	ENSPLAG00000010456	ptcd2	90	44.092	Poecilia_latipinna
ENSNLEG00000004516	PTCD2	89	44.092	ENSPREG00000021797	ptcd2	88	44.092	Poecilia_reticulata
ENSNLEG00000004516	PTCD2	99	82.429	ENSPPYG00000015543	PTCD2	99	82.429	Pongo_abelii
ENSNLEG00000004516	PTCD2	80	67.308	ENSPCAG00000006806	PTCD2	99	67.308	Procavia_capensis
ENSNLEG00000004516	PTCD2	99	76.425	ENSPVAG00000010935	PTCD2	99	76.425	Pteropus_vampyrus
ENSNLEG00000004516	PTCD2	89	44.092	ENSPNYG00000003122	ptcd2	89	44.092	Pundamilia_nyererei
ENSNLEG00000004516	PTCD2	96	47.215	ENSPNAG00000021490	ptcd2	97	47.215	Pygocentrus_nattereri
ENSNLEG00000004516	PTCD2	99	72.324	ENSRNOG00000028403	Ptcd2	100	72.324	Rattus_norvegicus
ENSNLEG00000004516	PTCD2	100	84.536	ENSRBIG00000032929	PTCD2	100	84.536	Rhinopithecus_bieti
ENSNLEG00000004516	PTCD2	99	90.601	ENSRROG00000000080	PTCD2	100	90.601	Rhinopithecus_roxellana
ENSNLEG00000004516	PTCD2	99	87.206	ENSSBOG00000018911	PTCD2	100	87.206	Saimiri_boliviensis_boliviensis
ENSNLEG00000004516	PTCD2	99	58.594	ENSSHAG00000003833	PTCD2	99	58.594	Sarcophilus_harrisii
ENSNLEG00000004516	PTCD2	93	45.152	ENSSFOG00015015415	ptcd2	93	45.152	Scleropages_formosus
ENSNLEG00000004516	PTCD2	89	43.516	ENSSMAG00000010350	ptcd2	90	43.516	Scophthalmus_maximus
ENSNLEG00000004516	PTCD2	94	47.397	ENSSDUG00000008142	ptcd2	90	47.397	Seriola_dumerili
ENSNLEG00000004516	PTCD2	94	47.397	ENSSLDG00000015284	ptcd2	95	47.397	Seriola_lalandi_dorsalis
ENSNLEG00000004516	PTCD2	80	69.677	ENSSARG00000004983	PTCD2	99	69.677	Sorex_araneus
ENSNLEG00000004516	PTCD2	99	51.948	ENSSPUG00000000176	PTCD2	96	51.948	Sphenodon_punctatus
ENSNLEG00000004516	PTCD2	96	44.267	ENSSPAG00000008591	ptcd2	96	44.267	Stegastes_partitus
ENSNLEG00000004516	PTCD2	99	81.039	ENSSSCG00000016975	PTCD2	90	81.039	Sus_scrofa
ENSNLEG00000004516	PTCD2	89	52.754	ENSTGUG00000005705	PTCD2	99	52.754	Taeniopygia_guttata
ENSNLEG00000004516	PTCD2	99	78.756	ENSTBEG00000016559	PTCD2	99	78.756	Tupaia_belangeri
ENSNLEG00000004516	PTCD2	99	81.137	ENSTTRG00000011851	PTCD2	99	81.137	Tursiops_truncatus
ENSNLEG00000004516	PTCD2	99	77.662	ENSUAMG00000007583	PTCD2	90	77.662	Ursus_americanus
ENSNLEG00000004516	PTCD2	99	77.285	ENSUMAG00000007666	PTCD2	100	77.285	Ursus_maritimus
ENSNLEG00000004516	PTCD2	99	80.103	ENSVPAG00000009597	PTCD2	99	80.103	Vicugna_pacos
ENSNLEG00000004516	PTCD2	99	76.762	ENSVVUG00000007299	-	100	76.762	Vulpes_vulpes
ENSNLEG00000004516	PTCD2	90	53.561	ENSXETG00000031652	PTCD2	92	53.561	Xenopus_tropicalis
ENSNLEG00000004516	PTCD2	89	43.516	ENSXMAG00000005940	ptcd2	82	43.516	Xiphophorus_maculatus