EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSNLEG00000004842 (Gene tree)
Gene ID
100590871
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Nomascus_leucogenys
Status
putative
Strand
Plus strand
Length
41687 bases
Position
chr12:62964970-63006656
Accession
100590871
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNLEP00000036344CSDPF00313.224.9e-8415
ENSNLEP00000036344CSDPF00313.224.9e-8425
ENSNLEP00000036344CSDPF00313.224.9e-8435
ENSNLEP00000036344CSDPF00313.224.9e-8445
ENSNLEP00000036344CSDPF00313.224.9e-8455
ENSNLEP00000005955CSDPF00313.226.7e-8415
ENSNLEP00000005955CSDPF00313.226.7e-8425
ENSNLEP00000005955CSDPF00313.226.7e-8435
ENSNLEP00000005955CSDPF00313.226.7e-8445
ENSNLEP00000005955CSDPF00313.226.7e-8455
ENSNLEP00000038112CSDPF00313.228.3e-8415
ENSNLEP00000038112CSDPF00313.228.3e-8425
ENSNLEP00000038112CSDPF00313.228.3e-8435
ENSNLEP00000038112CSDPF00313.228.3e-8445
ENSNLEP00000038112CSDPF00313.228.3e-8455
ENSNLEP00000041627CSDPF00313.221.1e-3112
ENSNLEP00000041627CSDPF00313.221.1e-3122
ENSNLEP00000038247CSDPF00313.222.8e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNLET00000056828CSDE1-2032376-ENSNLEP00000036344791 (aa)-A0A2I3GYA8
ENSNLET00000048861CSDE1-2014288XM_003268019ENSNLEP00000038112844 (aa)XP_003268067A0A2I3H3R2
ENSNLET00000057433CSDE1-204447-ENSNLEP00000038247148 (aa)-A0A2I3H451
ENSNLET00000056464CSDE1-205912-ENSNLEP00000041627303 (aa)-A0A2I3HDQ6
ENSNLET00000006264CSDE1-2024195XM_003268018ENSNLEP00000005955813 (aa)XP_003268066G1QYD4
Gene Model
Click here to download ENSNLEG00000004842's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000004842's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNLEG00000004842CSDE110099.882ENSG00000009307CSDE1100100.000Homo_sapiens
ENSNLEG00000004842CSDE19777.662ENSAPOG00000015538csde110077.662Acanthochromis_polyacanthus
ENSNLEG00000004842CSDE110097.666ENSAMEG00000017129CSDE110097.666Ailuropoda_melanoleuca
ENSNLEG00000004842CSDE19080.383ENSACIG00000015175csde19980.383Amphilophus_citrinellus
ENSNLEG00000004842CSDE19777.792ENSAOCG00000011510csde110077.792Amphiprion_ocellaris
ENSNLEG00000004842CSDE19777.792ENSAPEG00000007194csde110077.792Amphiprion_percula
ENSNLEG00000004842CSDE19777.403ENSATEG00000003864csde110077.403Anabas_testudineus
ENSNLEG00000004842CSDE19791.786ENSAPLG00000008797CSDE110091.786Anas_platyrhynchos
ENSNLEG00000004842CSDE19592.105ENSACAG00000003120CSDE110092.105Anolis_carolinensis
ENSNLEG00000004842CSDE19971.010ENSANAG00000028396-9174.150Aotus_nancymaae
ENSNLEG00000004842CSDE110099.526ENSANAG00000024665CSDE110099.526Aotus_nancymaae
ENSNLEG00000004842CSDE19777.373ENSACLG00000013296csde110077.373Astatotilapia_calliptera
ENSNLEG00000004842CSDE19777.043ENSAMXG00000007436csde110077.043Astyanax_mexicanus
ENSNLEG00000004842CSDE110098.697ENSBTAG00000000678CSDE110098.697Bos_taurus
ENSNLEG00000004842CSDE110099.645ENSCJAG00000012565CSDE110099.645Callithrix_jacchus
ENSNLEG00000004842CSDE19899.123ENSCAFG00000009618CSDE110099.123Canis_familiaris
ENSNLEG00000004842CSDE19799.218ENSCAFG00020000481CSDE110099.218Canis_lupus_dingo
ENSNLEG00000004842CSDE110098.578ENSCHIG00000017250CSDE110098.696Capra_hircus
ENSNLEG00000004842CSDE110097.867ENSTSYG00000003747CSDE110098.864Carlito_syrichta
ENSNLEG00000004842CSDE19591.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSNLEG00000004842CSDE19792.269ENSCPOG00000040388CSDE110093.484Cavia_porcellus
ENSNLEG00000004842CSDE110099.645ENSCCAG00000036794CSDE110099.645Cebus_capucinus
ENSNLEG00000004842CSDE19277.228ENSCCAG00000033677-9976.485Cebus_capucinus
ENSNLEG00000004842CSDE19474.388ENSCCAG00000030878-9174.388Cebus_capucinus
ENSNLEG00000004842CSDE110099.882ENSCATG00000036962CSDE110099.882Cercocebus_atys
ENSNLEG00000004842CSDE19798.566ENSCLAG00000006618CSDE110098.622Chinchilla_lanigera
ENSNLEG00000004842CSDE110099.882ENSCSAG00000001658CSDE110099.882Chlorocebus_sabaeus
ENSNLEG00000004842CSDE110099.080ENSCHOG00000000918CSDE19199.080Choloepus_hoffmanni
ENSNLEG00000004842CSDE19792.177ENSCPBG00000016547CSDE110092.481Chrysemys_picta_bellii
ENSNLEG00000004842CSDE19441.943ENSCING00000014465-9643.032Ciona_intestinalis
ENSNLEG00000004842CSDE19342.092ENSCSAVG00000008100-9842.503Ciona_savignyi
ENSNLEG00000004842CSDE19693.967ENSCANG00000031069-10093.967Colobus_angolensis_palliatus
ENSNLEG00000004842CSDE110099.874ENSCANG00000035096CSDE110099.874Colobus_angolensis_palliatus
ENSNLEG00000004842CSDE19798.435ENSCGRG00001016833-10098.496Cricetulus_griseus_chok1gshd
ENSNLEG00000004842CSDE19781.226ENSCGRG00001014011-10081.226Cricetulus_griseus_chok1gshd
ENSNLEG00000004842CSDE19498.218ENSCGRG00000002225-10098.218Cricetulus_griseus_crigri
ENSNLEG00000004842CSDE19784.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSNLEG00000004842CSDE19777.243ENSCSEG00000002620csde110077.243Cynoglossus_semilaevis
ENSNLEG00000004842CSDE19776.753ENSCVAG00000001344csde110076.753Cyprinodon_variegatus
ENSNLEG00000004842CSDE19974.335ENSDARG00000074758csde19983.838Danio_rerio
ENSNLEG00000004842CSDE19998.219ENSDNOG00000010287-9598.219Dasypus_novemcinctus
ENSNLEG00000004842CSDE17378.261ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSNLEG00000004842CSDE19698.204ENSDORG00000011609Csde110098.204Dipodomys_ordii
ENSNLEG00000004842CSDE19447.541FBgn0263352Unr8148.394Drosophila_melanogaster
ENSNLEG00000004842CSDE19777.154ENSETEG00000013678-9977.154Echinops_telfairi
ENSNLEG00000004842CSDE18891.011ENSETEG00000006280-10087.500Echinops_telfairi
ENSNLEG00000004842CSDE19398.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSNLEG00000004842CSDE17668.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSNLEG00000004842CSDE18763.670ENSEBUG00000008647csde19954.286Eptatretus_burgeri
ENSNLEG00000004842CSDE110098.155ENSEASG00005006284CSDE110098.997Equus_asinus_asinus
ENSNLEG00000004842CSDE110098.155ENSECAG00000020885CSDE110098.997Equus_caballus
ENSNLEG00000004842CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSNLEG00000004842CSDE19775.679ENSELUG00000015507csde110075.679Esox_lucius
ENSNLEG00000004842CSDE110099.171ENSFCAG00000029266CSDE110099.218Felis_catus
ENSNLEG00000004842CSDE19591.855ENSFALG00000003407CSDE110091.855Ficedula_albicollis
ENSNLEG00000004842CSDE19699.102ENSFDAG00000007882CSDE110099.102Fukomys_damarensis
ENSNLEG00000004842CSDE19875.118ENSFHEG00000010799csde110076.779Fundulus_heteroclitus
ENSNLEG00000004842CSDE19774.153ENSGMOG00000012731csde110076.721Gadus_morhua
ENSNLEG00000004842CSDE19392.072ENSGALG00000002139CSDE19892.072Gallus_gallus
ENSNLEG00000004842CSDE19578.041ENSGAFG00000005241csde19576.372Gambusia_affinis
ENSNLEG00000004842CSDE19775.063ENSGACG00000004544csde110077.625Gasterosteus_aculeatus
ENSNLEG00000004842CSDE110090.533ENSGAGG00000017685CSDE110092.105Gopherus_agassizii
ENSNLEG00000004842CSDE110099.882ENSGGOG00000002164CSDE110099.882Gorilla_gorilla
ENSNLEG00000004842CSDE19777.373ENSHBUG00000020315csde110077.373Haplochromis_burtoni
ENSNLEG00000004842CSDE19582.456ENSHGLG00000019549-10082.456Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19789.179ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19689.521ENSHGLG00000008555-10089.521Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19685.414ENSHGLG00000007471-9885.414Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19480.176ENSHGLG00000000650-9980.176Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19389.755ENSHGLG00000010039-10089.755Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19492.759ENSHGLG00000009620-10089.724Heterocephalus_glaber_female
ENSNLEG00000004842CSDE19389.532ENSHGLG00100006910-10089.532Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19184.100ENSHGLG00100004195-10084.100Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19784.355ENSHGLG00100012072-10084.355Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19682.786ENSHGLG00100007287-9882.786Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19780.339ENSHGLG00100001846-10080.339Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19799.087ENSHGLG00100019438-10099.123Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19481.960ENSHGLG00100004833-10081.960Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19484.481ENSHGLG00100002245-9984.481Heterocephalus_glaber_male
ENSNLEG00000004842CSDE19875.392ENSHCOG00000004158csde110076.333Hippocampus_comes
ENSNLEG00000004842CSDE19776.783ENSIPUG00000000355csde110076.783Ictalurus_punctatus
ENSNLEG00000004842CSDE18981.075ENSSTOG00000032722-9882.258Ictidomys_tridecemlineatus
ENSNLEG00000004842CSDE19780.307ENSSTOG00000030994-10080.307Ictidomys_tridecemlineatus
ENSNLEG00000004842CSDE19698.353ENSJJAG00000019571Csde110098.353Jaculus_jaculus
ENSNLEG00000004842CSDE19975.177ENSKMAG00000005685csde110076.267Kryptolebias_marmoratus
ENSNLEG00000004842CSDE19777.662ENSLBEG00000014770csde110077.662Labrus_bergylta
ENSNLEG00000004842CSDE19483.103ENSLACG00000018452CSDE19679.172Latimeria_chalumnae
ENSNLEG00000004842CSDE110077.817ENSLOCG00000010413csde19679.951Lepisosteus_oculatus
ENSNLEG00000004842CSDE19997.449ENSLAFG00000007150CSDE19897.449Loxodonta_africana
ENSNLEG00000004842CSDE110099.882ENSMFAG00000003674CSDE110099.882Macaca_fascicularis
ENSNLEG00000004842CSDE110099.882ENSMMUG00000001974CSDE110099.882Macaca_mulatta
ENSNLEG00000004842CSDE110099.882ENSMNEG00000045247CSDE110099.882Macaca_nemestrina
ENSNLEG00000004842CSDE110099.645ENSMLEG00000038673CSDE110099.645Mandrillus_leucophaeus
ENSNLEG00000004842CSDE19778.312ENSMAMG00000008821csde110078.312Mastacembelus_armatus
ENSNLEG00000004842CSDE19975.747ENSMZEG00005021675csde110077.373Maylandia_zebra
ENSNLEG00000004842CSDE19791.536ENSMGAG00000016381CSDE110091.536Meleagris_gallopavo
ENSNLEG00000004842CSDE19698.653ENSMAUG00000014031Csde110098.653Mesocricetus_auratus
ENSNLEG00000004842CSDE110098.278ENSMICG00000002050CSDE110098.278Microcebus_murinus
ENSNLEG00000004842CSDE19798.435ENSMOCG00000018960Csde110098.496Microtus_ochrogaster
ENSNLEG00000004842CSDE19777.662ENSMMOG00000015075csde110077.662Mola_mola
ENSNLEG00000004842CSDE19995.038ENSMODG00000004685CSDE110095.990Monodelphis_domestica
ENSNLEG00000004842CSDE19777.792ENSMALG00000007132csde110077.792Monopterus_albus
ENSNLEG00000004842CSDE19798.175MGP_CAROLIEiJ_G0025444Csde110098.675Mus_caroli
ENSNLEG00000004842CSDE19798.305ENSMUSG00000068823Csde110098.675Mus_musculus
ENSNLEG00000004842CSDE19798.566MGP_PahariEiJ_G0026888Csde110098.675Mus_pahari
ENSNLEG00000004842CSDE19798.566MGP_SPRETEiJ_G0026394Csde110098.675Mus_spretus
ENSNLEG00000004842CSDE19399.234ENSMPUG00000005753CSDE19999.234Mustela_putorius_furo
ENSNLEG00000004842CSDE110098.032ENSMLUG00000005681CSDE110098.032Myotis_lucifugus
ENSNLEG00000004842CSDE18385.185ENSNGAG00000012599-10071.047Nannospalax_galili
ENSNLEG00000004842CSDE19698.802ENSNGAG00000021929Csde110098.802Nannospalax_galili
ENSNLEG00000004842CSDE19777.373ENSNBRG00000020808csde110077.373Neolamprologus_brichardi
ENSNLEG00000004842CSDE19396.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSNLEG00000004842CSDE19896.644ENSOPRG00000005002CSDE18894.048Ochotona_princeps
ENSNLEG00000004842CSDE19467.478ENSODEG00000005979-9867.478Octodon_degus
ENSNLEG00000004842CSDE19698.802ENSODEG00000007383-10098.802Octodon_degus
ENSNLEG00000004842CSDE19972.827ENSONIG00000009309csde110075.214Oreochromis_niloticus
ENSNLEG00000004842CSDE19290.909ENSOANG00000003346-10079.551Ornithorhynchus_anatinus
ENSNLEG00000004842CSDE110097.986ENSOCUG00000016438CSDE110097.986Oryctolagus_cuniculus
ENSNLEG00000004842CSDE19777.503ENSORLG00000000707csde110077.503Oryzias_latipes
ENSNLEG00000004842CSDE19875.240ENSORLG00020005148csde110075.214Oryzias_latipes_hni
ENSNLEG00000004842CSDE19777.503ENSORLG00015019415csde110077.503Oryzias_latipes_hsok
ENSNLEG00000004842CSDE19778.052ENSOMEG00000015656csde110078.052Oryzias_melastigma
ENSNLEG00000004842CSDE110098.770ENSOGAG00000012127CSDE110098.770Otolemur_garnettii
ENSNLEG00000004842CSDE110098.647ENSOARG00000020034CSDE110098.647Ovis_aries
ENSNLEG00000004842CSDE110099.882ENSPPAG00000025861CSDE110099.882Pan_paniscus
ENSNLEG00000004842CSDE110099.171ENSPPRG00000006747CSDE110099.171Panthera_pardus
ENSNLEG00000004842CSDE110099.171ENSPTIG00000015468CSDE110099.248Panthera_tigris_altaica
ENSNLEG00000004842CSDE110099.763ENSPTRG00000033721CSDE110099.875Pan_troglodytes
ENSNLEG00000004842CSDE110099.882ENSPANG00000018873CSDE110099.882Papio_anubis
ENSNLEG00000004842CSDE19776.983ENSPKIG00000009459csde110076.983Paramormyrops_kingsleyae
ENSNLEG00000004842CSDE19195.133ENSPSIG00000003823CSDE19695.133Pelodiscus_sinensis
ENSNLEG00000004842CSDE19777.273ENSPMGG00000000772csde110077.273Periophthalmus_magnuspinnatus
ENSNLEG00000004842CSDE19698.653ENSPEMG00000020357-10098.653Peromyscus_maniculatus_bairdii
ENSNLEG00000004842CSDE110094.097ENSPCIG00000022587CSDE110096.115Phascolarctos_cinereus
ENSNLEG00000004842CSDE19478.425ENSPFOG00000012664csde110075.776Poecilia_formosa
ENSNLEG00000004842CSDE19471.275ENSPLAG00000017680csde19371.275Poecilia_latipinna
ENSNLEG00000004842CSDE19571.168ENSPMEG00000005094csde19671.168Poecilia_mexicana
ENSNLEG00000004842CSDE19874.733ENSPREG00000011631csde19183.459Poecilia_reticulata
ENSNLEG00000004842CSDE19599.749ENSPPYG00000000996CSDE110099.749Pongo_abelii
ENSNLEG00000004842CSDE110098.415ENSPCAG00000014368CSDE19698.415Procavia_capensis
ENSNLEG00000004842CSDE110098.906ENSPCOG00000017893CSDE110099.087Propithecus_coquereli
ENSNLEG00000004842CSDE110078.571ENSPCOG00000008223-10078.571Propithecus_coquereli
ENSNLEG00000004842CSDE110092.620ENSPVAG00000008225CSDE110092.620Pteropus_vampyrus
ENSNLEG00000004842CSDE19777.373ENSPNYG00000013745csde110077.373Pundamilia_nyererei
ENSNLEG00000004842CSDE19777.532ENSPNAG00000001958csde110077.532Pygocentrus_nattereri
ENSNLEG00000004842CSDE19598.496ENSRNOG00000061058Csde110098.496Rattus_norvegicus
ENSNLEG00000004842CSDE110094.479ENSRBIG00000038966-10097.674Rhinopithecus_bieti
ENSNLEG00000004842CSDE19796.094ENSRBIG00000038088-9998.387Rhinopithecus_bieti
ENSNLEG00000004842CSDE110099.882ENSRROG00000043101CSDE110099.882Rhinopithecus_roxellana
ENSNLEG00000004842CSDE110099.645ENSSBOG00000035592CSDE110099.645Saimiri_boliviensis_boliviensis
ENSNLEG00000004842CSDE110093.750ENSSHAG00000009831CSDE110095.828Sarcophilus_harrisii
ENSNLEG00000004842CSDE19776.853ENSSFOG00015007498csde110076.853Scleropages_formosus
ENSNLEG00000004842CSDE19778.182ENSSMAG00000007203csde110078.182Scophthalmus_maximus
ENSNLEG00000004842CSDE19777.662ENSSDUG00000015380csde110077.662Seriola_dumerili
ENSNLEG00000004842CSDE19777.662ENSSLDG00000008819csde110077.662Seriola_lalandi_dorsalis
ENSNLEG00000004842CSDE110096.683ENSSARG00000000738CSDE110096.683Sorex_araneus
ENSNLEG00000004842CSDE110090.651ENSSPUG00000008714CSDE110091.855Sphenodon_punctatus
ENSNLEG00000004842CSDE19975.801ENSSPAG00000000716csde110077.662Stegastes_partitus
ENSNLEG00000004842CSDE110099.052ENSSSCG00000006752CSDE110099.218Sus_scrofa
ENSNLEG00000004842CSDE19590.875ENSTGUG00000000972CSDE110090.875Taeniopygia_guttata
ENSNLEG00000004842CSDE19774.512ENSTRUG00000007996csde110074.512Takifugu_rubripes
ENSNLEG00000004842CSDE18783.721ENSTNIG00000010878csde19883.721Tetraodon_nigroviridis
ENSNLEG00000004842CSDE17997.436ENSTBEG00000011880-6797.608Tupaia_belangeri
ENSNLEG00000004842CSDE110098.278ENSTTRG00000015583CSDE110098.278Tursiops_truncatus
ENSNLEG00000004842CSDE19489.310ENSUAMG00000024289-9994.364Ursus_americanus
ENSNLEG00000004842CSDE15881.395ENSUAMG00000021782-9781.395Ursus_americanus
ENSNLEG00000004842CSDE19493.103ENSUAMG00000021779-10098.392Ursus_americanus
ENSNLEG00000004842CSDE19299.525ENSUMAG00000011714-9999.525Ursus_maritimus
ENSNLEG00000004842CSDE19891.484ENSUMAG00000009720-9891.484Ursus_maritimus
ENSNLEG00000004842CSDE15881.395ENSUMAG00000011713-9781.395Ursus_maritimus
ENSNLEG00000004842CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSNLEG00000004842CSDE18699.123ENSVVUG00000009890CSDE19499.123Vulpes_vulpes
ENSNLEG00000004842CSDE19585.893ENSXETG00000021448csde110085.893Xenopus_tropicalis
ENSNLEG00000004842CSDE18985.455ENSXCOG00000000035csde19978.041Xiphophorus_couchianus
ENSNLEG00000004842CSDE19975.858ENSXMAG00000009080csde19877.719Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us