EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000004899 (Gene tree)
Gene ID: 100595176
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 24227 bases
Position: chr10:69453263-69477489
Accession: 100595176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000047820	RRM_1	PF00076.22	2.9e-18	1	1
ENSNLEP00000005998	RRM_1	PF00076.22	7.9e-18	1	1
ENSNLEP00000029760	RRM_1	PF00076.22	1.2e-11	1	1
ENSNLEP00000047820	U1snRNP70_N	PF12220.8	7.7e-26	1	1
ENSNLEP00000029760	U1snRNP70_N	PF12220.8	1.4e-25	1	1
ENSNLEP00000005998	U1snRNP70_N	PF12220.8	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000053870	SNRNP70-203	1023	-	ENSNLEP00000029760	340 (aa)	-	A0A2I3GEL6
ENSNLET00000006309	SNRNP70-201	1952	XM_012510042	ENSNLEP00000005998	431 (aa)	XP_012365496	G1QYH7
ENSNLET00000036335	SNRNP70-202	750	-	ENSNLEP00000047820	249 (aa)	-	A0A2I3HW81

Gene Model

Click here to download ENSNLEG00000004899's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000004899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000004899	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSNLEG00000004899	SNRNP70	55	87.500	ENSAPOG00000009322	snrnp70	86	87.500	Acanthochromis_polyacanthus
ENSNLEG00000004899	SNRNP70	100	95.862	ENSAMEG00000014468	SNRNP70	99	92.644	Ailuropoda_melanoleuca
ENSNLEG00000004899	SNRNP70	100	99.413	ENSANAG00000036787	SNRNP70	98	99.413	Aotus_nancymaae
ENSNLEG00000004899	SNRNP70	87	91.705	ENSACLG00000011144	snrnp70	52	84.016	Astatotilapia_calliptera
ENSNLEG00000004899	SNRNP70	63	97.468	ENSBTAG00000048800	-	95	97.468	Bos_taurus
ENSNLEG00000004899	SNRNP70	100	48.400	WBGene00004390	rnp-7	55	52.747	Caenorhabditis_elegans
ENSNLEG00000004899	SNRNP70	100	99.074	ENSCJAG00000000193	SNRNP70	99	99.074	Callithrix_jacchus
ENSNLEG00000004899	SNRNP70	100	97.931	ENSCAFG00000003711	SNRNP70	99	97.931	Canis_familiaris
ENSNLEG00000004899	SNRNP70	100	96.339	ENSCAFG00020025470	SNRNP70	99	96.339	Canis_lupus_dingo
ENSNLEG00000004899	SNRNP70	63	97.468	ENSCHIG00000018534	-	95	97.468	Capra_hircus
ENSNLEG00000004899	SNRNP70	98	99.177	ENSCPOG00000019589	SNRNP70	99	97.018	Cavia_porcellus
ENSNLEG00000004899	SNRNP70	90	99.486	ENSCCAG00000036551	SNRNP70	100	99.486	Cebus_capucinus
ENSNLEG00000004899	SNRNP70	100	100.000	ENSCATG00000016149	SNRNP70	99	100.000	Cercocebus_atys
ENSNLEG00000004899	SNRNP70	100	98.152	ENSCLAG00000007991	SNRNP70	99	98.152	Chinchilla_lanigera
ENSNLEG00000004899	SNRNP70	100	98.974	ENSCSAG00000002759	SNRNP70	99	97.912	Chlorocebus_sabaeus
ENSNLEG00000004899	SNRNP70	85	99.052	ENSCPBG00000014841	SNRNP70	50	99.074	Chrysemys_picta_bellii
ENSNLEG00000004899	SNRNP70	100	99.769	ENSCANG00000036607	SNRNP70	99	99.769	Colobus_angolensis_palliatus
ENSNLEG00000004899	SNRNP70	98	99.177	ENSCGRG00001020676	Snrnp70	99	95.918	Cricetulus_griseus_chok1gshd
ENSNLEG00000004899	SNRNP70	98	99.177	ENSCGRG00000018048	Snrnp70	99	95.918	Cricetulus_griseus_crigri
ENSNLEG00000004899	SNRNP70	87	91.244	ENSCSEG00000011978	snrnp70	96	91.244	Cynoglossus_semilaevis
ENSNLEG00000004899	SNRNP70	61	89.542	ENSCVAG00000003912	snrnp70	96	89.542	Cyprinodon_variegatus
ENSNLEG00000004899	SNRNP70	87	90.783	ENSDARG00000077126	snrnp70	96	88.387	Danio_rerio
ENSNLEG00000004899	SNRNP70	63	97.468	ENSDNOG00000035849	-	95	97.468	Dasypus_novemcinctus
ENSNLEG00000004899	SNRNP70	98	99.177	ENSDORG00000010228	Snrnp70	99	95.890	Dipodomys_ordii
ENSNLEG00000004899	SNRNP70	73	100.000	ENSETEG00000005009	SNRNP70	72	100.000	Echinops_telfairi
ENSNLEG00000004899	SNRNP70	100	97.926	ENSEASG00005004917	SNRNP70	99	97.926	Equus_asinus_asinus
ENSNLEG00000004899	SNRNP70	63	97.468	ENSECAG00000013936	-	95	97.468	Equus_caballus
ENSNLEG00000004899	SNRNP70	99	83.565	ENSEEUG00000005666	SNRNP70	98	82.639	Erinaceus_europaeus
ENSNLEG00000004899	SNRNP70	98	98.770	ENSFCAG00000042603	SNRNP70	99	91.475	Felis_catus
ENSNLEG00000004899	SNRNP70	98	98.770	ENSFDAG00000013830	SNRNP70	94	99.675	Fukomys_damarensis
ENSNLEG00000004899	SNRNP70	86	91.163	ENSGMOG00000011492	snrnp70	95	91.163	Gadus_morhua
ENSNLEG00000004899	SNRNP70	87	91.705	ENSGACG00000000448	snrnp70	79	80.800	Gasterosteus_aculeatus
ENSNLEG00000004899	SNRNP70	61	79.365	ENSGAGG00000012628	SNRNP70	96	79.365	Gopherus_agassizii
ENSNLEG00000004899	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	99	100.000	Gorilla_gorilla
ENSNLEG00000004899	SNRNP70	63	97.468	ENSHGLG00100001651	-	95	97.468	Heterocephalus_glaber_male
ENSNLEG00000004899	SNRNP70	63	97.468	ENSSTOG00000013988	-	93	100.000	Ictidomys_tridecemlineatus
ENSNLEG00000004899	SNRNP70	98	99.177	ENSJJAG00000002614	Snrnp70	99	95.227	Jaculus_jaculus
ENSNLEG00000004899	SNRNP70	98	93.469	ENSLAFG00000028536	SNRNP70	97	100.000	Loxodonta_africana
ENSNLEG00000004899	SNRNP70	100	100.000	ENSMFAG00000039824	SNRNP70	99	100.000	Macaca_fascicularis
ENSNLEG00000004899	SNRNP70	100	98.974	ENSMMUG00000004928	SNRNP70	98	98.974	Macaca_mulatta
ENSNLEG00000004899	SNRNP70	100	100.000	ENSMNEG00000038057	SNRNP70	98	100.000	Macaca_nemestrina
ENSNLEG00000004899	SNRNP70	100	100.000	ENSMLEG00000030967	SNRNP70	99	100.000	Mandrillus_leucophaeus
ENSNLEG00000004899	SNRNP70	98	99.177	ENSMAUG00000020970	Snrnp70	99	96.136	Mesocricetus_auratus
ENSNLEG00000004899	SNRNP70	100	97.712	ENSMICG00000038437	SNRNP70	98	99.170	Microcebus_murinus
ENSNLEG00000004899	SNRNP70	98	98.770	ENSMOCG00000012825	Snrnp70	99	95.260	Microtus_ochrogaster
ENSNLEG00000004899	SNRNP70	76	76.716	ENSMODG00000023381	SNRNP70	100	80.000	Monodelphis_domestica
ENSNLEG00000004899	SNRNP70	98	98.770	MGP_CAROLIEiJ_G0029714	Snrnp70	98	96.460	Mus_caroli
ENSNLEG00000004899	SNRNP70	98	99.177	ENSMUSG00000063511	Snrnp70	94	100.000	Mus_musculus
ENSNLEG00000004899	SNRNP70	98	99.177	MGP_PahariEiJ_G0012939	Snrnp70	98	96.460	Mus_pahari
ENSNLEG00000004899	SNRNP70	98	99.177	MGP_SPRETEiJ_G0030812	Snrnp70	98	96.460	Mus_spretus
ENSNLEG00000004899	SNRNP70	100	98.157	ENSMPUG00000003258	SNRNP70	99	98.157	Mustela_putorius_furo
ENSNLEG00000004899	SNRNP70	100	98.157	ENSMLUG00000011766	SNRNP70	99	98.157	Myotis_lucifugus
ENSNLEG00000004899	SNRNP70	98	98.361	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSNLEG00000004899	SNRNP70	87	92.166	ENSNBRG00000003126	snrnp70	93	92.166	Neolamprologus_brichardi
ENSNLEG00000004899	SNRNP70	81	84.483	ENSMEUG00000015650	SNRNP70	55	98.438	Notamacropus_eugenii
ENSNLEG00000004899	SNRNP70	98	98.770	ENSODEG00000017499	SNRNP70	99	93.202	Octodon_degus
ENSNLEG00000004899	SNRNP70	87	91.705	ENSONIG00000007822	snrnp70	51	91.705	Oreochromis_niloticus
ENSNLEG00000004899	SNRNP70	87	99.537	ENSOANG00000005213	SNRNP70	94	99.537	Ornithorhynchus_anatinus
ENSNLEG00000004899	SNRNP70	98	98.770	ENSOCUG00000015081	SNRNP70	84	92.147	Oryctolagus_cuniculus
ENSNLEG00000004899	SNRNP70	87	92.166	ENSORLG00015010817	snrnp70	54	68.313	Oryzias_latipes_hsok
ENSNLEG00000004899	SNRNP70	100	97.477	ENSOGAG00000029310	SNRNP70	99	97.477	Otolemur_garnettii
ENSNLEG00000004899	SNRNP70	87	100.000	ENSOARG00000012608	SNRNP70	91	100.000	Ovis_aries
ENSNLEG00000004899	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	99	100.000	Pan_paniscus
ENSNLEG00000004899	SNRNP70	100	98.157	ENSPPRG00000005579	SNRNP70	99	98.157	Panthera_pardus
ENSNLEG00000004899	SNRNP70	100	100.000	ENSPTRG00000011277	SNRNP70	99	100.000	Pan_troglodytes
ENSNLEG00000004899	SNRNP70	100	100.000	ENSPANG00000004068	SNRNP70	99	100.000	Papio_anubis
ENSNLEG00000004899	SNRNP70	63	78.205	ENSPKIG00000019992	snrnp70	82	78.205	Paramormyrops_kingsleyae
ENSNLEG00000004899	SNRNP70	89	86.937	ENSPSIG00000015251	SNRNP70	88	85.714	Pelodiscus_sinensis
ENSNLEG00000004899	SNRNP70	62	89.677	ENSPMGG00000010153	snrnp70	75	89.677	Periophthalmus_magnuspinnatus
ENSNLEG00000004899	SNRNP70	98	98.770	ENSPEMG00000019011	Snrnp70	99	95.270	Peromyscus_maniculatus_bairdii
ENSNLEG00000004899	SNRNP70	75	83.957	ENSPMAG00000008502	snrnp70	96	82.065	Petromyzon_marinus
ENSNLEG00000004899	SNRNP70	98	95.062	ENSPCIG00000007296	SNRNP70	64	100.000	Phascolarctos_cinereus
ENSNLEG00000004899	SNRNP70	100	99.536	ENSPPYG00000010234	SNRNP70	99	99.536	Pongo_abelii
ENSNLEG00000004899	SNRNP70	100	93.103	ENSPCOG00000023103	SNRNP70	99	90.661	Propithecus_coquereli
ENSNLEG00000004899	SNRNP70	100	94.470	ENSPVAG00000009578	SNRNP70	99	92.627	Pteropus_vampyrus
ENSNLEG00000004899	SNRNP70	87	91.705	ENSPNYG00000003258	snrnp70	51	73.705	Pundamilia_nyererei
ENSNLEG00000004899	SNRNP70	95	66.949	ENSPNAG00000017453	snrnp70	51	67.083	Pygocentrus_nattereri
ENSNLEG00000004899	SNRNP70	100	99.768	ENSRBIG00000042387	SNRNP70	99	99.768	Rhinopithecus_bieti
ENSNLEG00000004899	SNRNP70	100	100.000	ENSRROG00000033636	SNRNP70	99	100.000	Rhinopithecus_roxellana
ENSNLEG00000004899	SNRNP70	100	99.537	ENSSBOG00000020026	SNRNP70	99	99.537	Saimiri_boliviensis_boliviensis
ENSNLEG00000004899	SNRNP70	98	95.062	ENSSHAG00000002194	SNRNP70	64	100.000	Sarcophilus_harrisii
ENSNLEG00000004899	SNRNP70	98	92.653	ENSSPUG00000016621	SNRNP70	51	98.611	Sphenodon_punctatus
ENSNLEG00000004899	SNRNP70	63	97.468	ENSSSCG00000023792	-	95	97.468	Sus_scrofa
ENSNLEG00000004899	SNRNP70	100	97.471	ENSTTRG00000017099	SNRNP70	99	97.471	Tursiops_truncatus
ENSNLEG00000004899	SNRNP70	100	98.157	ENSUAMG00000016147	SNRNP70	99	98.157	Ursus_americanus
ENSNLEG00000004899	SNRNP70	99	98.387	ENSUMAG00000001467	SNRNP70	95	97.468	Ursus_maritimus
ENSNLEG00000004899	SNRNP70	86	85.116	ENSVPAG00000005959	-	97	80.465	Vicugna_pacos
ENSNLEG00000004899	SNRNP70	100	98.157	ENSVVUG00000022976	SNRNP70	99	98.157	Vulpes_vulpes
ENSNLEG00000004899	SNRNP70	89	95.475	ENSXETG00000022919	snrnp70	56	95.475	Xenopus_tropicalis